Gene annotation
Transcriptome id Sobic.002G174200.1
Synonym WRKY46, Sb02g022280, ATWRKY46
Functional annotation WRKY74, expressed
UniProt C5X9X7
Pfam PF03106
Panther DB PTHR32096 PTHR32096:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G46400 : WRKY DNA-binding protein 46
RAP-DB (Rice) LOC_Os09g16510.1 : WRKY74, expressed
MaizeGDB (Corn) Zm00025a046550 , Zm00025a028194 , Zm00025a038706 , Zm00025a037794
Brachypodium KQK09011 , KQK09010 , KQJ89877 , PNT76490
Barley HORVU5Hr1G034830.5 , HORVU5Hr1G034830.4 , HORVU5Hr1G034830.1 , HORVU5Hr1G034830.3 , HORVU5Hr1G034830.2 , HORVU3Hr1G058670.1 , HORVU2Hr1G029430.1 , HORVU0Hr1G012740.2 , HORVU0Hr1G012740.3 , HORVU0Hr1G012740.1 , HORVU5Hr1G056130.2 , HORVU5Hr1G056130.1 , HORVU5Hr1G056130.3 , HORVU5Hr1G056130.4 , HORVU5Hr1G056130.5 , HORVU2Hr1G029430.2 , HORVU0Hr1G012750.1 , HORVU0Hr1G012750.2
Wheat TraesCS5D02G190800 , TraesCS2D02G168600 , TraesCS5B02G183800 , TraesCS7A02G116000 , TraesCS7D02G110600 , TraesCS7B02G012600 , TraesCS5A02G185600 , TraesCS2A02G161500 , TraesCS5D02G190700 , TraesCS2B02G187500 , TraesCS5B02G183700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G259600 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
2 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
3 Sobic.001G483400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
4 Sobic.001G259700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
6 Sobic.006G190100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed -
7 Sobic.002G405600 early response to dehydration 15, putative, expressed -
8 Sobic.002G291900 RING-H2 finger protein, putative, expressed -
9 Sobic.003G313800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
10 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.006G263600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -
14 Sobic.001G138600 VQ domain containing protein, putative, expressed -
15 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
16 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
17 Sobic.002G282300 expressed protein -
18 Sobic.009G036100 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
19 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
20 Sobic.006G193000 RING-H2 finger protein ATL2A, putative, expressed -


Gene co-expression network
sample Sobic002G174200 Sobic002G174200 Sobic001G259600 Sobic001G259600 Sobic002G174200--Sobic001G259600 Sobic009G036000 Sobic009G036000 Sobic002G174200--Sobic009G036000 Sobic001G483400 Sobic001G483400 Sobic002G174200--Sobic001G483400 Sobic001G259700 Sobic001G259700 Sobic002G174200--Sobic001G259700 Sobic007G213800 Sobic007G213800 Sobic002G174200--Sobic007G213800 Sobic006G190100 Sobic006G190100 Sobic002G174200--Sobic006G190100 Sobic002G405600 Sobic002G405600 Sobic002G174200--Sobic002G405600 Sobic002G291900 Sobic002G291900 Sobic002G174200--Sobic002G291900 Sobic003G313800 Sobic003G313800 Sobic002G174200--Sobic003G313800 Sobic001G259600--Sobic001G259700 Sobic001G259600--Sobic003G313800 Sobic010G209100 Sobic010G209100 Sobic001G259600--Sobic010G209100 Sobic002G282300 Sobic002G282300 Sobic001G259600--Sobic002G282300 Sobic006G263600 Sobic006G263600 Sobic001G259600--Sobic006G263600 Sobic001G259600--Sobic007G213800 Sobic003G324400 Sobic003G324400 Sobic001G259600--Sobic003G324400 Sobic004G169200 Sobic004G169200 Sobic001G259600--Sobic004G169200 Sobic005G037000 Sobic005G037000 Sobic001G259600--Sobic005G037000 Sobic001G320900 Sobic001G320900 Sobic009G036000--Sobic001G320900 Sobic009G036100 Sobic009G036100 Sobic009G036000--Sobic009G036100 Sobic009G247900 Sobic009G247900 Sobic009G036000--Sobic009G247900 Sobic001G383700 Sobic001G383700 Sobic009G036000--Sobic001G383700 Sobic003G364600 Sobic003G364600 Sobic009G036000--Sobic003G364600 Sobic007G074000 Sobic007G074000 Sobic009G036000--Sobic007G074000 Sobic001G308300 Sobic001G308300 Sobic009G036000--Sobic001G308300 Sobic001G391500 Sobic001G391500 Sobic009G036000--Sobic001G391500 Sobic009G036000--Sobic004G169200 Sobic005G010200 Sobic005G010200 Sobic001G483400--Sobic005G010200 Sobic010G220200 Sobic010G220200 Sobic001G483400--Sobic010G220200 Sobic009G129000 Sobic009G129000 Sobic001G483400--Sobic009G129000 Sobic001G483400--Sobic002G174200 Sobic004G065500 Sobic004G065500 Sobic001G483400--Sobic004G065500 Sobic006G230900 Sobic006G230900 Sobic001G483400--Sobic006G230900 Sobic006G190500 Sobic006G190500 Sobic001G483400--Sobic006G190500 Sobic010G217800 Sobic010G217800 Sobic001G483400--Sobic010G217800 Sobic002G082600 Sobic002G082600 Sobic001G483400--Sobic002G082600 Sobic001G259700--Sobic006G263600 Sobic009G141500 Sobic009G141500 Sobic001G259700--Sobic009G141500 Sobic001G259700--Sobic001G259600 Sobic002G328400 Sobic002G328400 Sobic001G259700--Sobic002G328400 Sobic001G259700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic001G259700--Sobic004G191400 Sobic001G449700 Sobic001G449700 Sobic001G259700--Sobic001G449700 Sobic001G259700--Sobic002G405600 Sobic001G079300 Sobic001G079300 Sobic001G259700--Sobic001G079300 Sobic003G144700 Sobic003G144700 Sobic007G213800--Sobic003G144700 Sobic007G213800--Sobic001G391500 Sobic007G213800--Sobic002G282300 Sobic007G213800--Sobic006G230900 Sobic003G197200 Sobic003G197200 Sobic007G213800--Sobic003G197200 Sobic001G138600 Sobic001G138600 Sobic007G213800--Sobic001G138600 Sobic006G231200 Sobic006G231200 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic001G459800 Sobic001G459800 Sobic007G213800--Sobic001G459800 Sobic001G443800 Sobic001G443800 Sobic006G190100--Sobic001G443800 Sobic006G190100--Sobic001G138600 Sobic006G190100--Sobic006G190500 Sobic006G190100--Sobic007G213800 Sobic002G261200 Sobic002G261200 Sobic006G190100--Sobic002G261200 Sobic003G148600 Sobic003G148600 Sobic006G190100--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic006G190100--Sobic001G371800 Sobic006G190100--Sobic001G391500 Sobic010G198600 Sobic010G198600 Sobic006G190100--Sobic010G198600 Sobic002G245800 Sobic002G245800 Sobic002G405600--Sobic002G245800 Sobic002G405600--Sobic003G324400 Sobic003G202200 Sobic003G202200 Sobic002G405600--Sobic003G202200 Sobic010G204600 Sobic010G204600 Sobic002G405600--Sobic010G204600 Sobic002G405600--Sobic009G247900 Sobic010G267600 Sobic010G267600 Sobic002G405600--Sobic010G267600 Sobic002G405600--Sobic006G263600 Sobic002G405600--Sobic001G259700 Sobic001G095300 Sobic001G095300 Sobic002G405600--Sobic001G095300 Sobic002G291900--Sobic001G443800 Sobic002G291900--Sobic003G197200 Sobic010G198500 Sobic010G198500 Sobic002G291900--Sobic010G198500 Sobic003G260300 Sobic003G260300 Sobic002G291900--Sobic003G260300 Sobic007G214600 Sobic007G214600 Sobic002G291900--Sobic007G214600 Sobic002G291900--Sobic003G148600 Sobic001G105900 Sobic001G105900 Sobic002G291900--Sobic001G105900 Sobic002G291900--Sobic007G213800 Sobic003G355100 Sobic003G355100 Sobic002G291900--Sobic003G355100 Sobic003G313800--Sobic001G259600 Sobic009G179500 Sobic009G179500 Sobic003G313800--Sobic009G179500 Sobic003G313800--Sobic007G213800 Sobic003G313800--Sobic002G282300 Sobic003G313800--Sobic003G324400 Sobic002G036100 Sobic002G036100 Sobic003G313800--Sobic002G036100 Sobic001G077400 Sobic001G077400 Sobic003G313800--Sobic001G077400 Sobic006G165100 Sobic006G165100 Sobic003G313800--Sobic006G165100 Sobic003G313800--Sobic005G037000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.