Gene annotation
Transcriptome id Sobic.007G085600.1
Synonym XTH23, XTR6, Sb07g007020
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5YJD9
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF28
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT4G14130 : xyloglucan endotransglucosylase/hydrolase 15
RAP-DB (Rice) LOC_Os08g13980.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a050765 , Zm00025a054957 , Zm00025a056955 , Zm00025a032745
Brachypodium KQK17341
Barley HORVU0Hr1G022110.1 , HORVU6Hr1G081590.1 , HORVU6Hr1G081590.3 , HORVU6Hr1G081590.2 , HORVU6Hr1G081590.5 , HORVU6Hr1G081590.4 , HORVU7Hr1G081740.1 , HORVU7Hr1G098330.6 , HORVU7Hr1G098330.4 , HORVU7Hr1G098330.5 , HORVU7Hr1G098330.2 , HORVU7Hr1G098330.1 , HORVU7Hr1G098280.2 , HORVU7Hr1G098280.3 , HORVU7Hr1G098280.1 , HORVU2Hr1G108420.5 , HORVU2Hr1G108420.6 , HORVU7Hr1G086890.4 , HORVU7Hr1G086890.5 , HORVU7Hr1G086890.6 , HORVU7Hr1G086890.7 , HORVU7Hr1G086890.1 , HORVU7Hr1G086890.2 , HORVU7Hr1G086890.3 , HORVU7Hr1G086890.8 , HORVU7Hr1G098320.2 , HORVU7Hr1G098390.1 , HORVU7Hr1G098390.2 , HORVU7Hr1G098390.3 , HORVU2Hr1G108420.4 , HORVU7Hr1G098320.3 , HORVU7Hr1G098260.1 , HORVU7Hr1G098260.2 , HORVU7Hr1G098260.3
Wheat TraesCS6D02G318500 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7D02G418600 , TraesCS7B02G326900 , TraesCS7B02G327200 , TraesCS7D02G419300 , TraesCS6A02G337600 , TraesCS2A02G484100 , TraesCS2A02G484100 , TraesCS7D02G339400 , TraesCS2B02G454800 , TraesCS7A02G426900 , TraesCS7B02G242900 , TraesCS7D02G418700 , TraesCS2A02G433800 , TraesCS7A02G427000 , TraesCS7B02G327500 , TraesCS7D02G419200 , TraesCS7D02G419600 , TraesCS2D02G484000 , TraesCS2D02G484000 , TraesCS7A02G426600 , TraesCS7A02G426700 , TraesCS7D02G419900 , TraesCS2D02G431800 , TraesCS2A02G434300 , TraesCS7A02G331200 , TraesCS2B02G510200 , TraesCS2B02G510200 , TraesCS7B02G327000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G072200 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.003G085750 - -
3 Sobic.010G103600 expressed protein -
4 Sobic.003G139333 - -
5 Sobic.001G481500 - -
6 Sobic.002G245200 beta-expansin precursor, putative, expressed -
7 Sobic.001G279350 - -
8 Sobic.006G253700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR23 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
9 Sobic.003G394400 ubiquitin family protein, putative, expressed -
10 Sobic.007G214400 EF hand family protein, putative, expressed -
11 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.009G032566 - -
13 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
14 Sobic.010G082201 - K13681: xyloglucan fucosyltransferase
15 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
16 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
18 Sobic.001G371800 expressed protein -
19 Sobic.001G481600 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
20 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1


Gene co-expression network
sample Sobic007G085600 Sobic007G085600 Sobic010G072200 Sobic010G072200 Sobic007G085600--Sobic010G072200 Sobic003G085750 Sobic003G085750 Sobic007G085600--Sobic003G085750 Sobic010G103600 Sobic010G103600 Sobic007G085600--Sobic010G103600 Sobic003G139333 Sobic003G139333 Sobic007G085600--Sobic003G139333 Sobic001G481500 Sobic001G481500 Sobic007G085600--Sobic001G481500 Sobic002G245200 Sobic002G245200 Sobic007G085600--Sobic002G245200 Sobic001G279350 Sobic001G279350 Sobic007G085600--Sobic001G279350 Sobic006G253700 Sobic006G253700 Sobic007G085600--Sobic006G253700 Sobic003G394400 Sobic003G394400 Sobic007G085600--Sobic003G394400 Sobic010G072200--Sobic007G085600 Sobic010G072200--Sobic010G103600 Sobic001G052500 Sobic001G052500 Sobic010G072200--Sobic001G052500 Sobic010G072200--Sobic003G085750 Sobic010G072200--Sobic003G139333 Sobic001G419100 Sobic001G419100 Sobic010G072200--Sobic001G419100 Sobic005G202400 Sobic005G202400 Sobic010G072200--Sobic005G202400 Sobic010G072200--Sobic006G253700 Sobic001G183800 Sobic001G183800 Sobic010G072200--Sobic001G183800 Sobic003G085750--Sobic001G279350 Sobic001G481300 Sobic001G481300 Sobic003G085750--Sobic001G481300 Sobic003G355100 Sobic003G355100 Sobic003G085750--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic003G085750--Sobic007G214600 Sobic007G214400 Sobic007G214400 Sobic003G085750--Sobic007G214400 Sobic001G371800 Sobic001G371800 Sobic003G085750--Sobic001G371800 Sobic004G109600 Sobic004G109600 Sobic003G085750--Sobic004G109600 Sobic003G085750--Sobic003G394400 Sobic009G169000 Sobic009G169000 Sobic003G085750--Sobic009G169000 Sobic010G103600--Sobic010G072200 Sobic010G103600--Sobic007G085600 Sobic001G476500 Sobic001G476500 Sobic010G103600--Sobic001G476500 Sobic002G287100 Sobic002G287100 Sobic010G103600--Sobic002G287100 Sobic009G032800 Sobic009G032800 Sobic010G103600--Sobic009G032800 Sobic005G179200 Sobic005G179200 Sobic010G103600--Sobic005G179200 Sobic008G186100 Sobic008G186100 Sobic010G103600--Sobic008G186100 Sobic006G092500 Sobic006G092500 Sobic010G103600--Sobic006G092500 Sobic001G320400 Sobic001G320400 Sobic010G103600--Sobic001G320400 Sobic003G139333--Sobic010G072200 Sobic003G139333--Sobic007G085600 Sobic003G139333--Sobic001G052500 Sobic004G034100 Sobic004G034100 Sobic003G139333--Sobic004G034100 Sobic003G126200 Sobic003G126200 Sobic003G139333--Sobic003G126200 Sobic010G031900 Sobic010G031900 Sobic003G139333--Sobic010G031900 Sobic002G223550 Sobic002G223550 Sobic003G139333--Sobic002G223550 Sobic006G230600 Sobic006G230600 Sobic003G139333--Sobic006G230600 Sobic003G139333--Sobic010G103600 Sobic001G309600 Sobic001G309600 Sobic001G481500--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic001G481500--Sobic006G032700 Sobic001G397200 Sobic001G397200 Sobic001G481500--Sobic001G397200 Sobic010G032100 Sobic010G032100 Sobic001G481500--Sobic010G032100 Sobic001G149800 Sobic001G149800 Sobic001G481500--Sobic001G149800 Sobic003G138300 Sobic003G138300 Sobic001G481500--Sobic003G138300 Sobic003G086600 Sobic003G086600 Sobic001G481500--Sobic003G086600 Sobic002G215300 Sobic002G215300 Sobic001G481500--Sobic002G215300 Sobic002G068600 Sobic002G068600 Sobic001G481500--Sobic002G068600 Sobic001G187500 Sobic001G187500 Sobic002G245200--Sobic001G187500 Sobic001G425500 Sobic001G425500 Sobic002G245200--Sobic001G425500 Sobic001G425600 Sobic001G425600 Sobic002G245200--Sobic001G425600 Sobic002G245200--Sobic001G279350 Sobic002G369301 Sobic002G369301 Sobic002G245200--Sobic002G369301 Sobic006G207000 Sobic006G207000 Sobic002G245200--Sobic006G207000 Sobic004G251800 Sobic004G251800 Sobic002G245200--Sobic004G251800 Sobic004G109700 Sobic004G109700 Sobic002G245200--Sobic004G109700 Sobic004G086400 Sobic004G086400 Sobic002G245200--Sobic004G086400 Sobic001G279350--Sobic001G481300 Sobic001G279350--Sobic004G109600 Sobic007G147700 Sobic007G147700 Sobic001G279350--Sobic007G147700 Sobic001G279350--Sobic003G355100 Sobic001G279350--Sobic001G425600 Sobic001G279350--Sobic004G109700 Sobic003G197200 Sobic003G197200 Sobic001G279350--Sobic003G197200 Sobic001G279350--Sobic001G425500 Sobic001G279350--Sobic007G214600 Sobic003G043550 Sobic003G043550 Sobic006G253700--Sobic003G043550 Sobic002G248201 Sobic002G248201 Sobic006G253700--Sobic002G248201 Sobic007G122866 Sobic007G122866 Sobic006G253700--Sobic007G122866 Sobic006G253700--Sobic003G085750 Sobic006G253700--Sobic001G052500 Sobic003G252750 Sobic003G252750 Sobic006G253700--Sobic003G252750 Sobic006G253700--Sobic007G085600 Sobic006G253700--Sobic010G072200 Sobic001G105900 Sobic001G105900 Sobic006G253700--Sobic001G105900 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic003G394400--Sobic001G371800 Sobic004G166200 Sobic004G166200 Sobic003G394400--Sobic004G166200 Sobic001G107800 Sobic001G107800 Sobic003G394400--Sobic001G107800 Sobic003G394400--Sobic003G355100 Sobic003G148600 Sobic003G148600 Sobic003G394400--Sobic003G148600 Sobic003G394400--Sobic007G214600
Octagon: transcription factors


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