Gene annotation
Transcriptome id Sobic.003G139333.1
Synonym -
Functional annotation -
UniProt A0A1W0VXB6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G072200 Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
2 Sobic.007G085600 glycosyl hydrolases family 16, putative, expressed -
3 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
4 Sobic.004G034100 NIN-like protein 2, putative, expressed -
5 Sobic.003G126200 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
6 Sobic.010G031900 early nodulin 93 ENOD93 protein, putative, expressed -
7 Sobic.002G223550 - -
8 Sobic.006G230600 expressed protein -
9 Sobic.010G103600 expressed protein -
10 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G085750 - -
12 Sobic.009G123400 - -
13 Sobic.001G481500 - -
14 Sobic.007G214400 EF hand family protein, putative, expressed -
15 Sobic.003G284200 expressed protein -
16 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.001G254100 "PGL1(Ortholog in rice:Heang and Sassa, 2012)"(PubMedID : 31659838)@bHLH family protein, putative, expressed -
18 Sobic.003G018300 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -
20 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase


Gene co-expression network
sample Sobic003G139333 Sobic003G139333 Sobic010G072200 Sobic010G072200 Sobic003G139333--Sobic010G072200 Sobic007G085600 Sobic007G085600 Sobic003G139333--Sobic007G085600 Sobic001G052500 Sobic001G052500 Sobic003G139333--Sobic001G052500 Sobic004G034100 Sobic004G034100 Sobic003G139333--Sobic004G034100 Sobic003G126200 Sobic003G126200 Sobic003G139333--Sobic003G126200 Sobic010G031900 Sobic010G031900 Sobic003G139333--Sobic010G031900 Sobic002G223550 Sobic002G223550 Sobic003G139333--Sobic002G223550 Sobic006G230600 Sobic006G230600 Sobic003G139333--Sobic006G230600 Sobic010G103600 Sobic010G103600 Sobic003G139333--Sobic010G103600 Sobic010G072200--Sobic007G085600 Sobic010G072200--Sobic010G103600 Sobic010G072200--Sobic001G052500 Sobic003G085750 Sobic003G085750 Sobic010G072200--Sobic003G085750 Sobic010G072200--Sobic003G139333 Sobic001G419100 Sobic001G419100 Sobic010G072200--Sobic001G419100 Sobic005G202400 Sobic005G202400 Sobic010G072200--Sobic005G202400 Sobic006G253700 Sobic006G253700 Sobic010G072200--Sobic006G253700 Sobic001G183800 Sobic001G183800 Sobic010G072200--Sobic001G183800 Sobic007G085600--Sobic010G072200 Sobic007G085600--Sobic003G085750 Sobic007G085600--Sobic010G103600 Sobic007G085600--Sobic003G139333 Sobic001G481500 Sobic001G481500 Sobic007G085600--Sobic001G481500 Sobic002G245200 Sobic002G245200 Sobic007G085600--Sobic002G245200 Sobic001G279350 Sobic001G279350 Sobic007G085600--Sobic001G279350 Sobic007G085600--Sobic006G253700 Sobic003G394400 Sobic003G394400 Sobic007G085600--Sobic003G394400 Sobic007G122866 Sobic007G122866 Sobic001G052500--Sobic007G122866 Sobic003G076100 Sobic003G076100 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic001G052500--Sobic010G072200 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic004G034100--Sobic002G223550 Sobic001G492100 Sobic001G492100 Sobic004G034100--Sobic001G492100 Sobic004G034100--Sobic003G139333 Sobic003G265150 Sobic003G265150 Sobic004G034100--Sobic003G265150 Sobic006G130700 Sobic006G130700 Sobic004G034100--Sobic006G130700 Sobic004G034100--Sobic001G052500 Sobic007G227401 Sobic007G227401 Sobic004G034100--Sobic007G227401 Sobic002G185400 Sobic002G185400 Sobic004G034100--Sobic002G185400 Sobic002G361600 Sobic002G361600 Sobic004G034100--Sobic002G361600 Sobic008G130200 Sobic008G130200 Sobic003G126200--Sobic008G130200 Sobic007G214400 Sobic007G214400 Sobic003G126200--Sobic007G214400 Sobic009G198000 Sobic009G198000 Sobic003G126200--Sobic009G198000 Sobic004G280200 Sobic004G280200 Sobic003G126200--Sobic004G280200 Sobic009G169000 Sobic009G169000 Sobic003G126200--Sobic009G169000 Sobic008G070350 Sobic008G070350 Sobic003G126200--Sobic008G070350 Sobic002G068600 Sobic002G068600 Sobic003G126200--Sobic002G068600 Sobic003G086600 Sobic003G086600 Sobic003G126200--Sobic003G086600 Sobic001G371800 Sobic001G371800 Sobic003G126200--Sobic001G371800 Sobic009G123400 Sobic009G123400 Sobic010G031900--Sobic009G123400 Sobic004G340200 Sobic004G340200 Sobic010G031900--Sobic004G340200 Sobic010G031900--Sobic007G214400 Sobic006G032700 Sobic006G032700 Sobic010G031900--Sobic006G032700 Sobic010G031100 Sobic010G031100 Sobic010G031900--Sobic010G031100 Sobic001G149800 Sobic001G149800 Sobic010G031900--Sobic001G149800 Sobic002G389000 Sobic002G389000 Sobic010G031900--Sobic002G389000 Sobic001G107800 Sobic001G107800 Sobic010G031900--Sobic001G107800 Sobic001G254100 Sobic001G254100 Sobic010G031900--Sobic001G254100 Sobic002G223550--Sobic006G130700 Sobic002G223550--Sobic001G492100 Sobic003G146450 Sobic003G146450 Sobic002G223550--Sobic003G146450 Sobic009G025950 Sobic009G025950 Sobic002G223550--Sobic009G025950 Sobic002G223550--Sobic007G227401 Sobic003G380700 Sobic003G380700 Sobic002G223550--Sobic003G380700 Sobic010G043350 Sobic010G043350 Sobic002G223550--Sobic010G043350 Sobic005G032700 Sobic005G032700 Sobic002G223550--Sobic005G032700 Sobic008G191800 Sobic008G191800 Sobic002G223550--Sobic008G191800 Sobic006G230600--Sobic002G389000 Sobic006G230600--Sobic001G371800 Sobic006G230600--Sobic001G107800 Sobic001G076100 Sobic001G076100 Sobic006G230600--Sobic001G076100 Sobic006G230600--Sobic007G214400 Sobic006G230600--Sobic003G394400 Sobic004G088300 Sobic004G088300 Sobic006G230600--Sobic004G088300 Sobic006G230800 Sobic006G230800 Sobic006G230600--Sobic006G230800 Sobic006G230600--Sobic010G031100 Sobic010G103600--Sobic010G072200 Sobic010G103600--Sobic007G085600 Sobic001G476500 Sobic001G476500 Sobic010G103600--Sobic001G476500 Sobic002G287100 Sobic002G287100 Sobic010G103600--Sobic002G287100 Sobic009G032800 Sobic009G032800 Sobic010G103600--Sobic009G032800 Sobic005G179200 Sobic005G179200 Sobic010G103600--Sobic005G179200 Sobic008G186100 Sobic008G186100 Sobic010G103600--Sobic008G186100 Sobic006G092500 Sobic006G092500 Sobic010G103600--Sobic006G092500 Sobic001G320400 Sobic001G320400 Sobic010G103600--Sobic001G320400
Octagon: transcription factors


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