Gene annotation
Transcriptome id Sobic.004G034100.1
Synonym Sb04g002940, NLP7
Functional annotation NIN-like protein 2, putative, expressed
UniProt C5XTY5
Pfam PF00564 PF02042
Panther DB PTHR32002 PTHR32002:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G64530 : Plant regulator RWP-RK family protein
RAP-DB (Rice) LOC_Os02g04340.1 : NIN-like protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a018909
Brachypodium -
Barley HORVU6Hr1G018510.7 , HORVU6Hr1G018510.4 , HORVU6Hr1G018510.3 , HORVU6Hr1G018510.1
Wheat TraesCS6B02G130800 , TraesCS6B02G130800 , TraesCS6A02G102400 , TraesCS6A02G102400 , TraesCS6D02G091000
Populus -


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cDNA sequences
Sobic.004G034100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G223550 - -
2 Sobic.001G492100 lactose permease-related, putative, expressed -
3 Sobic.003G139333 - -
4 Sobic.003G265150 - -
5 Sobic.006G130700 expressed protein K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.001G052500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
7 Sobic.007G227401 - -
8 Sobic.002G185400 transporter-related, putative, expressed -
9 Sobic.002G361600 ZOS7-10 - C2H2 zinc finger protein, expressed -
10 Sobic.009G240100 receptor-like protein kinase homolog RK20-1, putative, expressed -
11 Sobic.005G002700 sorgoleone-producing in root hair(PubmedID : 15361534)@fatty acid desaturase, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
12 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.007G108700 expressed protein -
14 Sobic.002G248800 expressed protein -
15 Sobic.004G287000 rho-GTPase-activating protein-related, putative, expressed -
16 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
17 Sobic.001G108800 expressed protein -
18 Sobic.004G349237 - -
19 Sobic.001G006101 - -
20 Sobic.001G021900 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase


Gene co-expression network
sample Sobic004G034100 Sobic004G034100 Sobic002G223550 Sobic002G223550 Sobic004G034100--Sobic002G223550 Sobic001G492100 Sobic001G492100 Sobic004G034100--Sobic001G492100 Sobic003G139333 Sobic003G139333 Sobic004G034100--Sobic003G139333 Sobic003G265150 Sobic003G265150 Sobic004G034100--Sobic003G265150 Sobic006G130700 Sobic006G130700 Sobic004G034100--Sobic006G130700 Sobic001G052500 Sobic001G052500 Sobic004G034100--Sobic001G052500 Sobic007G227401 Sobic007G227401 Sobic004G034100--Sobic007G227401 Sobic002G185400 Sobic002G185400 Sobic004G034100--Sobic002G185400 Sobic002G361600 Sobic002G361600 Sobic004G034100--Sobic002G361600 Sobic002G223550--Sobic006G130700 Sobic002G223550--Sobic001G492100 Sobic003G146450 Sobic003G146450 Sobic002G223550--Sobic003G146450 Sobic009G025950 Sobic009G025950 Sobic002G223550--Sobic009G025950 Sobic002G223550--Sobic007G227401 Sobic003G380700 Sobic003G380700 Sobic002G223550--Sobic003G380700 Sobic010G043350 Sobic010G043350 Sobic002G223550--Sobic010G043350 Sobic005G032700 Sobic005G032700 Sobic002G223550--Sobic005G032700 Sobic008G191800 Sobic008G191800 Sobic002G223550--Sobic008G191800 Sobic001G492100--Sobic002G223550 Sobic001G492100--Sobic006G130700 Sobic001G492100--Sobic004G034100 Sobic001G492100--Sobic007G227401 Sobic008G014601 Sobic008G014601 Sobic001G492100--Sobic008G014601 Sobic001G492100--Sobic002G185400 Sobic002G373700 Sobic002G373700 Sobic001G492100--Sobic002G373700 Sobic009G240100 Sobic009G240100 Sobic001G492100--Sobic009G240100 Sobic007G191400 Sobic007G191400 Sobic001G492100--Sobic007G191400 Sobic010G072200 Sobic010G072200 Sobic003G139333--Sobic010G072200 Sobic007G085600 Sobic007G085600 Sobic003G139333--Sobic007G085600 Sobic003G139333--Sobic001G052500 Sobic003G139333--Sobic004G034100 Sobic003G126200 Sobic003G126200 Sobic003G139333--Sobic003G126200 Sobic010G031900 Sobic010G031900 Sobic003G139333--Sobic010G031900 Sobic003G139333--Sobic002G223550 Sobic006G230600 Sobic006G230600 Sobic003G139333--Sobic006G230600 Sobic010G103600 Sobic010G103600 Sobic003G139333--Sobic010G103600 Sobic004G349237 Sobic004G349237 Sobic003G265150--Sobic004G349237 Sobic003G265150--Sobic002G361600 Sobic003G414900 Sobic003G414900 Sobic003G265150--Sobic003G414900 Sobic006G138966 Sobic006G138966 Sobic003G265150--Sobic006G138966 Sobic002G421501 Sobic002G421501 Sobic003G265150--Sobic002G421501 Sobic001G512633 Sobic001G512633 Sobic003G265150--Sobic001G512633 Sobic002G372900 Sobic002G372900 Sobic003G265150--Sobic002G372900 Sobic003G265150--Sobic002G185400 Sobic003G265150--Sobic004G034100 Sobic006G130700--Sobic009G025950 Sobic006G130700--Sobic009G240100 Sobic006G130700--Sobic002G223550 Sobic006G130700--Sobic003G380700 Sobic006G130700--Sobic003G146450 Sobic002G342901 Sobic002G342901 Sobic006G130700--Sobic002G342901 Sobic007G176300 Sobic007G176300 Sobic006G130700--Sobic007G176300 Sobic006G130700--Sobic008G014601 Sobic006G130700--Sobic007G227401 Sobic007G122866 Sobic007G122866 Sobic001G052500--Sobic007G122866 Sobic003G076100 Sobic003G076100 Sobic001G052500--Sobic003G076100 Sobic004G280000 Sobic004G280000 Sobic001G052500--Sobic004G280000 Sobic001G052500--Sobic010G072200 Sobic006G253700 Sobic006G253700 Sobic001G052500--Sobic006G253700 Sobic001G108800 Sobic001G108800 Sobic001G052500--Sobic001G108800 Sobic008G050500 Sobic008G050500 Sobic001G052500--Sobic008G050500 Sobic003G085750 Sobic003G085750 Sobic001G052500--Sobic003G085750 Sobic006G252532 Sobic006G252532 Sobic001G052500--Sobic006G252532 Sobic007G227401--Sobic006G130700 Sobic003G072566 Sobic003G072566 Sobic007G227401--Sobic003G072566 Sobic007G227401--Sobic002G223550 Sobic003G365450 Sobic003G365450 Sobic007G227401--Sobic003G365450 Sobic007G227401--Sobic009G025950 Sobic001G097800 Sobic001G097800 Sobic007G227401--Sobic001G097800 Sobic007G227401--Sobic003G146450 Sobic003G361150 Sobic003G361150 Sobic007G227401--Sobic003G361150 Sobic006G174725 Sobic006G174725 Sobic007G227401--Sobic006G174725 Sobic001G084200 Sobic001G084200 Sobic002G185400--Sobic001G084200 Sobic001G001132 Sobic001G001132 Sobic002G185400--Sobic001G001132 Sobic009G168700 Sobic009G168700 Sobic002G185400--Sobic009G168700 Sobic002G185400--Sobic006G138966 Sobic005G073101 Sobic005G073101 Sobic002G185400--Sobic005G073101 Sobic001G192750 Sobic001G192750 Sobic002G185400--Sobic001G192750 Sobic004G067850 Sobic004G067850 Sobic002G185400--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic002G185400--Sobic008G032850 Sobic002G342200 Sobic002G342200 Sobic002G185400--Sobic002G342200 Sobic002G361600--Sobic004G349237 Sobic002G361600--Sobic003G265150 Sobic002G361600--Sobic002G421501 Sobic002G361600--Sobic003G414900 Sobic002G361600--Sobic001G097800 Sobic002G361600--Sobic004G034100 Sobic002G311300 Sobic002G311300 Sobic002G361600--Sobic002G311300 Sobic002G242100 Sobic002G242100 Sobic002G361600--Sobic002G242100 Sobic002G361600--Sobic006G130700
Octagon: transcription factors


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