Gene annotation
| Transcriptome id |
Sobic.001G492100.1,Sobic.001G492100.2 |
| Synonym |
Sb01g046010 |
| Functional annotation |
lactose permease-related, putative, expressed |
| UniProt |
C5WWU2 |
| Pfam |
PF13347 |
| Panther DB |
PTHR11328
PTHR11328:SF34 |
| NCBI CDD |
KOG4830; Predicted sugar transporter |
| KEGG Orthology |
- |
| Gene Ontology |
- |
Orthologs (automatic annotation)
| TAIR |
AT3G60070 : Major facilitator superfamily protein |
| RAP-DB (Rice) |
LOC_Os03g07170.1 : lactose permease-related, putative, expressed |
| MaizeGDB (Corn) |
Zm00025a053354 |
| Brachypodium |
KQK23452 |
| Barley |
HORVU4Hr1G074740.10
, HORVU4Hr1G074740.11
, HORVU4Hr1G074740.12
, HORVU4Hr1G074740.13
, HORVU4Hr1G074740.14
, HORVU4Hr1G074740.2
, HORVU4Hr1G074740.3
, HORVU4Hr1G074740.1
, HORVU4Hr1G074740.6
, HORVU4Hr1G074740.7
, HORVU4Hr1G074740.4
, HORVU4Hr1G074740.5
, HORVU4Hr1G074740.8
, HORVU4Hr1G074740.9 |
| Wheat |
TraesCS4A02G020100
, TraesCS4B02G283600
, TraesCS4D02G282300 |
| Populus |
- |
JBrowse
Expression pattern by RNA-Seq analysis
| FPKM plot |
 |
Find similar expressed genes
| Top 20 genes with similar expressed profiles |
 |
| Rank |
Gene |
Function |
KEGG orthology |
| 1 |
Sobic.002G223550 |
- |
- |
| 2 |
Sobic.006G130700 |
expressed protein |
K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4 |
| 3 |
Sobic.004G034100 |
NIN-like protein 2, putative, expressed |
- |
| 4 |
Sobic.007G227401 |
- |
- |
| 5 |
Sobic.008G014601 |
- |
- |
| 6 |
Sobic.002G185400 |
transporter-related, putative, expressed |
- |
| 7 |
Sobic.002G373700 |
expressed protein |
- |
| 8 |
Sobic.009G240100 |
receptor-like protein kinase homolog RK20-1, putative, expressed |
- |
| 9 |
Sobic.007G191400 |
"domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR7 - Auxin-responsive SAUR gene family member, expressed |
K14488: SAUR family protein |
| 10 |
Sobic.003G124900 |
serpin domain containing protein, putative, expressed |
K13963: serpin B |
| 11 |
Sobic.003G237700 |
- |
- |
| 12 |
Sobic.003G146450 |
- |
- |
| 13 |
Sobic.003G380700 |
expressed protein |
- |
| 14 |
Sobic.009G025950 |
- |
- |
| 15 |
Sobic.001G084200 |
UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed |
- |
| 16 |
Sobic.001G006101 |
- |
- |
| 17 |
Sobic.005G137800 |
expressed protein |
- |
| 18 |
Sobic.003G392800 |
gibberellin response modulator protein, putative, expressed |
- |
| 19 |
Sobic.007G154001 |
- |
- |
| 20 |
Sobic.002G247700 |
expressed protein |
- |
Gene co-expression network
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Octagon: transcription factors