Gene annotation
Transcriptome id Sobic.002G373700.1
Synonym Sb02g039163
Functional annotation expressed protein
UniProt A0A1W0W7A0
Pfam -
Panther DB PTHR34045 PTHR34045:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72490 : -
RAP-DB (Rice) LOC_Os07g42290.1 : expressed protein
MaizeGDB (Corn) Zm00025a048752
Brachypodium KQK15267
Barley HORVU2Hr1G031440.1 , HORVU2Hr1G031440.2
Wheat TraesCS2D02G177400 , TraesCS2A02G169900 , TraesCS2B02G196200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G191400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR7 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
2 Sobic.003G124900 serpin domain containing protein, putative, expressed K13963: serpin B
3 Sobic.005G227900 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
4 Sobic.004G317401 - -
5 Sobic.010G170150 - -
6 Sobic.008G014601 - -
7 Sobic.002G342200 expressed protein -
8 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.001G492100 lactose permease-related, putative, expressed -
10 Sobic.003G059600 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
11 Sobic.007G115600 protein kinase family protein, putative, expressed -
12 Sobic.003G363600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transcription factor, putative, expressed K14431: transcription factor TGA
13 Sobic.009G240100 receptor-like protein kinase homolog RK20-1, putative, expressed -
14 Sobic.K044402 - -
15 Sobic.004G202900 Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.007G176300 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
17 Sobic.009G150600 expressed protein -
18 Sobic.007G154001 - -
19 Sobic.009G025950 - -
20 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase


Gene co-expression network
sample Sobic002G373700 Sobic002G373700 Sobic007G191400 Sobic007G191400 Sobic002G373700--Sobic007G191400 Sobic003G124900 Sobic003G124900 Sobic002G373700--Sobic003G124900 Sobic005G227900 Sobic005G227900 Sobic002G373700--Sobic005G227900 Sobic004G317401 Sobic004G317401 Sobic002G373700--Sobic004G317401 Sobic010G170150 Sobic010G170150 Sobic002G373700--Sobic010G170150 Sobic008G014601 Sobic008G014601 Sobic002G373700--Sobic008G014601 Sobic002G342200 Sobic002G342200 Sobic002G373700--Sobic002G342200 Sobic001G075300 Sobic001G075300 Sobic002G373700--Sobic001G075300 Sobic001G492100 Sobic001G492100 Sobic002G373700--Sobic001G492100 Sobic007G191400--Sobic004G317401 Sobic007G176300 Sobic007G176300 Sobic007G191400--Sobic007G176300 Sobic009G240100 Sobic009G240100 Sobic007G191400--Sobic009G240100 Sobic007G191400--Sobic002G373700 Sobic006G130700 Sobic006G130700 Sobic007G191400--Sobic006G130700 Sobic007G191400--Sobic008G014601 Sobic002G185400 Sobic002G185400 Sobic007G191400--Sobic002G185400 Sobic007G115600 Sobic007G115600 Sobic007G191400--Sobic007G115600 Sobic009G025950 Sobic009G025950 Sobic007G191400--Sobic009G025950 Sobic003G380700 Sobic003G380700 Sobic003G124900--Sobic003G380700 Sobic005G057500 Sobic005G057500 Sobic003G124900--Sobic005G057500 Sobic008G177750 Sobic008G177750 Sobic003G124900--Sobic008G177750 Sobic008G191800 Sobic008G191800 Sobic003G124900--Sobic008G191800 Sobic002G247700 Sobic002G247700 Sobic003G124900--Sobic002G247700 Sobic003G360500 Sobic003G360500 Sobic003G124900--Sobic003G360500 Sobic007G047200 Sobic007G047200 Sobic003G124900--Sobic007G047200 Sobic010G043350 Sobic010G043350 Sobic003G124900--Sobic010G043350 Sobic003G254400 Sobic003G254400 Sobic003G124900--Sobic003G254400 Sobic004G041600 Sobic004G041600 Sobic005G227900--Sobic004G041600 SobicK044402 SobicK044402 Sobic005G227900--SobicK044402 Sobic003G015700 Sobic003G015700 Sobic005G227900--Sobic003G015700 Sobic005G227900--Sobic008G014601 Sobic007G055400 Sobic007G055400 Sobic005G227900--Sobic007G055400 Sobic005G227900--Sobic007G115600 Sobic001G423900 Sobic001G423900 Sobic005G227900--Sobic001G423900 Sobic005G227900--Sobic007G176300 Sobic002G342901 Sobic002G342901 Sobic005G227900--Sobic002G342901 Sobic004G317401--Sobic007G191400 Sobic004G202900 Sobic004G202900 Sobic004G317401--Sobic004G202900 Sobic004G317401--Sobic009G240100 Sobic004G317401--Sobic007G176300 Sobic003G059600 Sobic003G059600 Sobic004G317401--Sobic003G059600 Sobic004G266100 Sobic004G266100 Sobic004G317401--Sobic004G266100 Sobic004G317401--Sobic005G227900 Sobic004G317401--Sobic002G373700 Sobic010G019600 Sobic010G019600 Sobic004G317401--Sobic010G019600 Sobic010G170150--Sobic001G075300 Sobic010G082100 Sobic010G082100 Sobic010G170150--Sobic010G082100 Sobic008G076700 Sobic008G076700 Sobic010G170150--Sobic008G076700 Sobic009G150600 Sobic009G150600 Sobic010G170150--Sobic009G150600 Sobic001G349200 Sobic001G349200 Sobic010G170150--Sobic001G349200 Sobic001G348200 Sobic001G348200 Sobic010G170150--Sobic001G348200 Sobic001G396700 Sobic001G396700 Sobic010G170150--Sobic001G396700 Sobic010G170150--Sobic002G373700 Sobic006G209000 Sobic006G209000 Sobic010G170150--Sobic006G209000 Sobic008G014601--Sobic006G130700 Sobic008G014601--Sobic003G380700 Sobic008G014601--Sobic009G025950 Sobic008G014601--Sobic007G176300 Sobic008G014601--Sobic009G240100 Sobic003G146450 Sobic003G146450 Sobic008G014601--Sobic003G146450 Sobic008G014601--Sobic002G247700 Sobic008G014601--Sobic002G342901 Sobic008G014601--Sobic005G227900 Sobic009G168700 Sobic009G168700 Sobic002G342200--Sobic009G168700 Sobic004G048600 Sobic004G048600 Sobic002G342200--Sobic004G048600 Sobic006G178200 Sobic006G178200 Sobic002G342200--Sobic006G178200 Sobic009G147100 Sobic009G147100 Sobic002G342200--Sobic009G147100 Sobic003G291050 Sobic003G291050 Sobic002G342200--Sobic003G291050 Sobic008G192100 Sobic008G192100 Sobic002G342200--Sobic008G192100 Sobic004G019900 Sobic004G019900 Sobic002G342200--Sobic004G019900 Sobic002G302400 Sobic002G302400 Sobic002G342200--Sobic002G302400 Sobic005G082950 Sobic005G082950 Sobic002G342200--Sobic005G082950 Sobic001G075300--Sobic010G170150 Sobic001G075300--Sobic009G150600 Sobic001G075300--Sobic008G076700 Sobic001G428600 Sobic001G428600 Sobic001G075300--Sobic001G428600 Sobic007G108700 Sobic007G108700 Sobic001G075300--Sobic007G108700 Sobic001G075300--Sobic010G082100 Sobic010G083300 Sobic010G083300 Sobic001G075300--Sobic010G083300 Sobic001G075300--Sobic002G185400 Sobic004G212600 Sobic004G212600 Sobic001G075300--Sobic004G212600 Sobic002G223550 Sobic002G223550 Sobic001G492100--Sobic002G223550 Sobic001G492100--Sobic006G130700 Sobic004G034100 Sobic004G034100 Sobic001G492100--Sobic004G034100 Sobic007G227401 Sobic007G227401 Sobic001G492100--Sobic007G227401 Sobic001G492100--Sobic008G014601 Sobic001G492100--Sobic002G185400 Sobic001G492100--Sobic002G373700 Sobic001G492100--Sobic009G240100 Sobic001G492100--Sobic007G191400
Octagon: transcription factors


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