Gene annotation
Transcriptome id Sobic.001G075300.1
Synonym AtMYB36, MYB36, Sb01g006800
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5WZ77 , Q8S3Z1 , Q6URR9
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF654
NCBI CDD -
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57620 : myb domain protein 36
RAP-DB (Rice) LOC_Os03g56090.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a008353 , Zm00025a016687
Brachypodium KQK12989 , KQK02077
Barley HORVU6Hr1G083250.1 , HORVU6Hr1G083250.2 , HORVU6Hr1G083250.3 , HORVU6Hr1G083250.4 , HORVU2Hr1G010450.6 , HORVU2Hr1G010450.4 , HORVU2Hr1G010450.5 , HORVU2Hr1G010450.2 , HORVU2Hr1G010450.3 , HORVU2Hr1G010450.1 , HORVU5Hr1G098540.3 , HORVU5Hr1G098540.2 , HORVU5Hr1G098540.1
Wheat TraesCS1D02G371900 , TraesCS1B02G384000 , TraesCS6A02G344700 , TraesCS5D02G415800 , TraesCS2B02G082400 , TraesCS6B02G377400 , TraesCS2A02G069300 , TraesCS5A02G405800 , TraesCS6D02G327300 , TraesCS5B02G410500 , TraesCS2D02G068000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G170150 - -
2 Sobic.009G150600 expressed protein -
3 Sobic.008G076700 protein kinase, putative, expressed -
4 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -
5 Sobic.007G108700 expressed protein -
6 Sobic.010G082100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.010G083300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
8 Sobic.002G185400 transporter-related, putative, expressed -
9 Sobic.004G212600 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
10 Sobic.007G191400 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR7 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
11 Sobic.002G334200 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
12 Sobic.003G351600 expressed protein -
13 Sobic.006G097000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
14 Sobic.010G083400 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.002G373700 expressed protein -
16 Sobic.007G028600 expressed protein -
17 Sobic.007G021800 carrier, putative, expressed -
18 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -
19 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
20 Sobic.002G250300 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic001G075300 Sobic001G075300 Sobic010G170150 Sobic010G170150 Sobic001G075300--Sobic010G170150 Sobic009G150600 Sobic009G150600 Sobic001G075300--Sobic009G150600 Sobic008G076700 Sobic008G076700 Sobic001G075300--Sobic008G076700 Sobic001G428600 Sobic001G428600 Sobic001G075300--Sobic001G428600 Sobic007G108700 Sobic007G108700 Sobic001G075300--Sobic007G108700 Sobic010G082100 Sobic010G082100 Sobic001G075300--Sobic010G082100 Sobic010G083300 Sobic010G083300 Sobic001G075300--Sobic010G083300 Sobic002G185400 Sobic002G185400 Sobic001G075300--Sobic002G185400 Sobic004G212600 Sobic004G212600 Sobic001G075300--Sobic004G212600 Sobic010G170150--Sobic001G075300 Sobic010G170150--Sobic010G082100 Sobic010G170150--Sobic008G076700 Sobic010G170150--Sobic009G150600 Sobic001G349200 Sobic001G349200 Sobic010G170150--Sobic001G349200 Sobic001G348200 Sobic001G348200 Sobic010G170150--Sobic001G348200 Sobic001G396700 Sobic001G396700 Sobic010G170150--Sobic001G396700 Sobic002G373700 Sobic002G373700 Sobic010G170150--Sobic002G373700 Sobic006G209000 Sobic006G209000 Sobic010G170150--Sobic006G209000 Sobic007G021700 Sobic007G021700 Sobic009G150600--Sobic007G021700 Sobic007G021800 Sobic007G021800 Sobic009G150600--Sobic007G021800 Sobic004G038700 Sobic004G038700 Sobic009G150600--Sobic004G038700 Sobic005G010100 Sobic005G010100 Sobic009G150600--Sobic005G010100 Sobic009G150600--Sobic001G075300 Sobic008G011700 Sobic008G011700 Sobic009G150600--Sobic008G011700 Sobic009G150600--Sobic010G170150 Sobic003G228600 Sobic003G228600 Sobic009G150600--Sobic003G228600 Sobic004G011100 Sobic004G011100 Sobic009G150600--Sobic004G011100 Sobic008G076700--Sobic010G170150 Sobic008G076700--Sobic001G075300 Sobic004G029300 Sobic004G029300 Sobic008G076700--Sobic004G029300 Sobic008G076700--Sobic009G150600 Sobic002G334200 Sobic002G334200 Sobic008G076700--Sobic002G334200 Sobic008G076700--Sobic010G082100 Sobic008G076700--Sobic001G396700 Sobic008G076700--Sobic007G021800 Sobic008G076700--Sobic001G349200 Sobic006G202600 Sobic006G202600 Sobic001G428600--Sobic006G202600 Sobic001G508532 Sobic001G508532 Sobic001G428600--Sobic001G508532 Sobic001G237900 Sobic001G237900 Sobic001G428600--Sobic001G237900 Sobic010G196000 Sobic010G196000 Sobic001G428600--Sobic010G196000 Sobic008G127933 Sobic008G127933 Sobic001G428600--Sobic008G127933 Sobic005G213600 Sobic005G213600 Sobic001G428600--Sobic005G213600 Sobic003G053300 Sobic003G053300 Sobic001G428600--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G428600--Sobic006G158400 Sobic010G158500 Sobic010G158500 Sobic001G428600--Sobic010G158500 Sobic007G108700--Sobic004G011100 Sobic003G139300 Sobic003G139300 Sobic007G108700--Sobic003G139300 Sobic003G368600 Sobic003G368600 Sobic007G108700--Sobic003G368600 Sobic001G021900 Sobic001G021900 Sobic007G108700--Sobic001G021900 Sobic002G356500 Sobic002G356500 Sobic007G108700--Sobic002G356500 Sobic007G108700--Sobic001G075300 Sobic002G235500 Sobic002G235500 Sobic007G108700--Sobic002G235500 Sobic010G204200 Sobic010G204200 Sobic007G108700--Sobic010G204200 Sobic003G024900 Sobic003G024900 Sobic007G108700--Sobic003G024900 Sobic003G240500 Sobic003G240500 Sobic010G082100--Sobic003G240500 Sobic001G506500 Sobic001G506500 Sobic010G082100--Sobic001G506500 Sobic007G007300 Sobic007G007300 Sobic010G082100--Sobic007G007300 Sobic005G110514 Sobic005G110514 Sobic010G082100--Sobic005G110514 Sobic009G106100 Sobic009G106100 Sobic010G082100--Sobic009G106100 Sobic006G266800 Sobic006G266800 Sobic010G082100--Sobic006G266800 Sobic004G308500 Sobic004G308500 Sobic010G082100--Sobic004G308500 Sobic001G274400 Sobic001G274400 Sobic010G082100--Sobic001G274400 Sobic010G082100--Sobic010G170150 Sobic010G083300--Sobic001G075300 Sobic010G083300--Sobic002G185400 Sobic005G196700 Sobic005G196700 Sobic010G083300--Sobic005G196700 Sobic007G115600 Sobic007G115600 Sobic010G083300--Sobic007G115600 Sobic006G223850 Sobic006G223850 Sobic010G083300--Sobic006G223850 Sobic004G163400 Sobic004G163400 Sobic010G083300--Sobic004G163400 Sobic007G077600 Sobic007G077600 Sobic010G083300--Sobic007G077600 Sobic010G083050 Sobic010G083050 Sobic010G083300--Sobic010G083050 Sobic003G331900 Sobic003G331900 Sobic010G083300--Sobic003G331900 Sobic001G084200 Sobic001G084200 Sobic002G185400--Sobic001G084200 Sobic001G001132 Sobic001G001132 Sobic002G185400--Sobic001G001132 Sobic009G168700 Sobic009G168700 Sobic002G185400--Sobic009G168700 Sobic006G138966 Sobic006G138966 Sobic002G185400--Sobic006G138966 Sobic005G073101 Sobic005G073101 Sobic002G185400--Sobic005G073101 Sobic001G192750 Sobic001G192750 Sobic002G185400--Sobic001G192750 Sobic004G067850 Sobic004G067850 Sobic002G185400--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic002G185400--Sobic008G032850 Sobic002G342200 Sobic002G342200 Sobic002G185400--Sobic002G342200 Sobic007G047500 Sobic007G047500 Sobic004G212600--Sobic007G047500 Sobic004G212600--Sobic010G204200 Sobic010G070300 Sobic010G070300 Sobic004G212600--Sobic010G070300 Sobic010G113100 Sobic010G113100 Sobic004G212600--Sobic010G113100 Sobic001G360400 Sobic001G360400 Sobic004G212600--Sobic001G360400 Sobic007G100700 Sobic007G100700 Sobic004G212600--Sobic007G100700 Sobic006G003600 Sobic006G003600 Sobic004G212600--Sobic006G003600 Sobic010G214300 Sobic010G214300 Sobic004G212600--Sobic010G214300 Sobic008G164450 Sobic008G164450 Sobic004G212600--Sobic008G164450
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.