Gene annotation
Transcriptome id Sobic.010G083400.1
Synonym Sb10g007228
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5Z6I6
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF199
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g11130.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a049565 , Zm00025a049564 , Zm00025a005705
Brachypodium KQJ98619 , KQJ99979 , KQK19010 , KQK19014 , PNT68270 , PNT61194
Barley HORVU3Hr1G022640.3 , HORVU3Hr1G022640.2 , HORVU3Hr1G022640.1 , HORVU5Hr1G068800.1 , HORVU0Hr1G019710.18 , HORVU0Hr1G019710.17 , HORVU0Hr1G019710.1 , HORVU5Hr1G069130.10 , HORVU0Hr1G019710.2 , HORVU0Hr1G019710.3 , HORVU0Hr1G019710.4 , HORVU0Hr1G019710.5 , HORVU0Hr1G019710.6 , HORVU0Hr1G019710.7 , HORVU0Hr1G019710.8
Wheat TraesCS3A02G122000
Populus -


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cDNA sequences
Sobic.010G083400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G244300 fasciclin domain containing protein, expressed -
2 Sobic.002G368300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@COBRA-like protein precursor, putative, expressed -
3 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
4 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
5 Sobic.007G159450 - -
6 Sobic.002G365801 - -
7 Sobic.008G055100 dirigent, putative, expressed -
8 Sobic.004G071000 "affects cinnamyl alcohol dehydrogenase (CAD) activity, resulting in altered lignin composition"(PubMedID : 20585750)@the MYB transcription factor binding domain AACG element(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Cinnamyl alcohol dehydrogenase, expressed in lignifying tissues"(PubMedID : 28606901)@"cinnamyl alcohol dehydrogenase, CAD2"(PubMedID : 19087955)@Brown midrib6 Gene(PubMedID : 19087955)@cinnamyl alcohol dehydrogenase(PubMedID : 19363091)@a cinnamyl alcohol dehydrogenase (CAD)(PubmedID : 26440083)@"cinnamyl alcohol dehydrogenase 2, CAD2. homolog in maize Bm1."(PubMedID : 9675900)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
9 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.008G005100 PMR5, putative, expressed -
11 Sobic.010G212500 - -
12 Sobic.002G261500 AIR12, putative, expressed -
13 Sobic.006G282300 - -
14 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.002G311501 - -
16 Sobic.010G096400 proteins of unknown function domain containing protein, expressed -
17 Sobic.002G365550 - -
18 Sobic.003G368100 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
19 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
20 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G083400 Sobic010G083400 Sobic002G244300 Sobic002G244300 Sobic010G083400--Sobic002G244300 Sobic002G368300 Sobic002G368300 Sobic010G083400--Sobic002G368300 Sobic002G154600 Sobic002G154600 Sobic010G083400--Sobic002G154600 Sobic009G088900 Sobic009G088900 Sobic010G083400--Sobic009G088900 Sobic007G159450 Sobic007G159450 Sobic010G083400--Sobic007G159450 Sobic002G365801 Sobic002G365801 Sobic010G083400--Sobic002G365801 Sobic008G055100 Sobic008G055100 Sobic010G083400--Sobic008G055100 Sobic004G071000 Sobic004G071000 Sobic010G083400--Sobic004G071000 Sobic003G121100 Sobic003G121100 Sobic010G083400--Sobic003G121100 Sobic003G368100 Sobic003G368100 Sobic002G244300--Sobic003G368100 Sobic003G206700 Sobic003G206700 Sobic002G244300--Sobic003G206700 Sobic009G008800 Sobic009G008800 Sobic002G244300--Sobic009G008800 Sobic002G244300--Sobic009G088900 Sobic001G046800 Sobic001G046800 Sobic002G244300--Sobic001G046800 Sobic002G244300--Sobic010G083400 Sobic001G261460 Sobic001G261460 Sobic002G244300--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic002G244300--Sobic010G047600 Sobic002G244300--Sobic008G055100 Sobic002G368300--Sobic002G365801 Sobic007G178900 Sobic007G178900 Sobic002G368300--Sobic007G178900 Sobic002G368300--Sobic004G071000 Sobic002G365500 Sobic002G365500 Sobic002G368300--Sobic002G365500 Sobic002G365550 Sobic002G365550 Sobic002G368300--Sobic002G365550 Sobic010G096400 Sobic010G096400 Sobic002G368300--Sobic010G096400 Sobic002G368300--Sobic009G088900 Sobic010G212500 Sobic010G212500 Sobic002G368300--Sobic010G212500 Sobic007G176000 Sobic007G176000 Sobic002G368300--Sobic007G176000 Sobic007G218800 Sobic007G218800 Sobic002G154600--Sobic007G218800 Sobic002G261500 Sobic002G261500 Sobic002G154600--Sobic002G261500 Sobic001G430100 Sobic001G430100 Sobic002G154600--Sobic001G430100 Sobic002G154600--Sobic009G088900 Sobic002G154600--Sobic008G055100 Sobic002G183700 Sobic002G183700 Sobic002G154600--Sobic002G183700 Sobic003G311800 Sobic003G311800 Sobic002G154600--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic002G154600--Sobic004G297900 Sobic002G154600--Sobic003G121100 Sobic009G088900--Sobic008G055100 Sobic001G059700 Sobic001G059700 Sobic009G088900--Sobic001G059700 Sobic003G053400 Sobic003G053400 Sobic009G088900--Sobic003G053400 Sobic005G061200 Sobic005G061200 Sobic009G088900--Sobic005G061200 Sobic009G088900--Sobic002G365801 Sobic009G088900--Sobic002G154600 Sobic009G088900--Sobic007G218800 Sobic009G088900--Sobic002G261500 Sobic009G088900--Sobic002G368300 Sobic007G159450--Sobic001G059700 Sobic007G159450--Sobic009G088900 Sobic007G159450--Sobic003G053400 Sobic001G382900 Sobic001G382900 Sobic007G159450--Sobic001G382900 Sobic010G085800 Sobic010G085800 Sobic007G159450--Sobic010G085800 Sobic007G159450--Sobic004G297900 Sobic009G109000 Sobic009G109000 Sobic007G159450--Sobic009G109000 Sobic008G005100 Sobic008G005100 Sobic007G159450--Sobic008G005100 Sobic009G232100 Sobic009G232100 Sobic007G159450--Sobic009G232100 Sobic002G365801--Sobic002G365550 Sobic002G365801--Sobic004G071000 Sobic010G115700 Sobic010G115700 Sobic002G365801--Sobic010G115700 Sobic002G365801--Sobic010G212500 Sobic002G365801--Sobic002G368300 Sobic002G365801--Sobic002G365500 Sobic002G365801--Sobic010G096400 Sobic001G379400 Sobic001G379400 Sobic002G365801--Sobic001G379400 Sobic002G365801--Sobic009G088900 Sobic008G055100--Sobic009G088900 Sobic001G514200 Sobic001G514200 Sobic008G055100--Sobic001G514200 Sobic008G055100--Sobic009G109000 Sobic008G055100--Sobic007G218800 Sobic008G055100--Sobic010G096400 Sobic001G049900 Sobic001G049900 Sobic008G055100--Sobic001G049900 Sobic008G055100--Sobic007G176000 Sobic008G055100--Sobic007G178900 Sobic008G055100--Sobic002G154600 Sobic004G071000--Sobic002G365801 Sobic004G071000--Sobic002G365550 Sobic004G071000--Sobic002G368300 Sobic004G071000--Sobic002G365500 Sobic004G071000--Sobic008G055100 Sobic004G071000--Sobic010G115700 Sobic004G071000--Sobic010G212500 Sobic002G365600 Sobic002G365600 Sobic004G071000--Sobic002G365600 Sobic004G071000--Sobic003G053400 Sobic003G121100--Sobic002G183700 Sobic004G110700 Sobic004G110700 Sobic003G121100--Sobic004G110700 Sobic006G225500 Sobic006G225500 Sobic003G121100--Sobic006G225500 Sobic003G140700 Sobic003G140700 Sobic003G121100--Sobic003G140700 Sobic003G269600 Sobic003G269600 Sobic003G121100--Sobic003G269600 Sobic003G121100--Sobic003G311800 Sobic006G170600 Sobic006G170600 Sobic003G121100--Sobic006G170600 Sobic003G399600 Sobic003G399600 Sobic003G121100--Sobic003G399600 Sobic006G274933 Sobic006G274933 Sobic003G121100--Sobic006G274933
Octagon: transcription factors


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