Gene annotation
Transcriptome id Sobic.004G212600.3,Sobic.004G212600.7,Sobic.004G212600.2,Sobic.004G212600.5,Sobic.004G212600.1,Sobic.004G212600.6,Sobic.004G212600.8,Sobic.004G212600.4,Sobic.004G212600.9
Synonym Sb04g025790, RLK4, CRK10
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1Z5RNI4 , A0A1Z5RNJ5 , A0A194YS10 , A0A1Z5RNG9 , A0A1Z5RNY2 , A0A1Z5RNL8 , C5XXC0 , A0A1Z5RP21
Pfam PF00069 PF07714
Panther DB PTHR27002 PTHR27002:SF115
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G28680 : cysteine-rich RLK (RECEPTOR-like protein kinase) 34,Malectin/receptor-like protein kinase family protein,Protein kinase superfamily protein,cysteine-rich RLK (RECEPTOR-like protein kinase) 10
RAP-DB (Rice) LOC_Os12g14699.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G047500 B3 DNA binding domain containing protein, expressed -
2 Sobic.010G204200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
3 Sobic.010G070300 DNA binding protein, putative, expressed -
4 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
5 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
7 Sobic.006G003600 transporter family protein, putative, expressed -
8 Sobic.010G214300 - -
9 Sobic.008G164450 - -
10 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
11 Sobic.001G507100 dirigent, putative, expressed -
12 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
13 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
14 Sobic.007G028600 expressed protein -
15 Sobic.004G306900 amino acid transporter, putative, expressed -
16 Sobic.006G092700 MLO domain containing protein, putative, expressed K08472: mlo protein
17 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.003G351600 expressed protein -
19 Sobic.007G057400 - -
20 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic004G212600 Sobic004G212600 Sobic007G047500 Sobic007G047500 Sobic004G212600--Sobic007G047500 Sobic010G204200 Sobic010G204200 Sobic004G212600--Sobic010G204200 Sobic010G070300 Sobic010G070300 Sobic004G212600--Sobic010G070300 Sobic010G113100 Sobic010G113100 Sobic004G212600--Sobic010G113100 Sobic001G360400 Sobic001G360400 Sobic004G212600--Sobic001G360400 Sobic007G100700 Sobic007G100700 Sobic004G212600--Sobic007G100700 Sobic006G003600 Sobic006G003600 Sobic004G212600--Sobic006G003600 Sobic010G214300 Sobic010G214300 Sobic004G212600--Sobic010G214300 Sobic008G164450 Sobic008G164450 Sobic004G212600--Sobic008G164450 Sobic007G047500--Sobic001G360400 Sobic007G047500--Sobic010G070300 Sobic007G047500--Sobic010G113100 Sobic007G030501 Sobic007G030501 Sobic007G047500--Sobic007G030501 Sobic007G047500--Sobic004G212600 Sobic010G206800 Sobic010G206800 Sobic007G047500--Sobic010G206800 Sobic003G351600 Sobic003G351600 Sobic007G047500--Sobic003G351600 Sobic007G047500--Sobic010G204200 Sobic007G021900 Sobic007G021900 Sobic007G047500--Sobic007G021900 Sobic010G204200--Sobic010G214300 Sobic001G506800 Sobic001G506800 Sobic010G204200--Sobic001G506800 Sobic010G204200--Sobic010G113100 Sobic010G204200--Sobic007G100700 Sobic010G204200--Sobic008G164450 Sobic008G011700 Sobic008G011700 Sobic010G204200--Sobic008G011700 Sobic001G209300 Sobic001G209300 Sobic010G204200--Sobic001G209300 Sobic010G204200--Sobic007G047500 Sobic009G181600 Sobic009G181600 Sobic010G204200--Sobic009G181600 Sobic001G183700 Sobic001G183700 Sobic010G070300--Sobic001G183700 Sobic010G070300--Sobic007G047500 Sobic010G070300--Sobic010G113100 Sobic006G251400 Sobic006G251400 Sobic010G070300--Sobic006G251400 Sobic010G070300--Sobic008G164450 Sobic004G029100 Sobic004G029100 Sobic010G070300--Sobic004G029100 Sobic002G385500 Sobic002G385500 Sobic010G070300--Sobic002G385500 Sobic002G042200 Sobic002G042200 Sobic010G070300--Sobic002G042200 Sobic004G119600 Sobic004G119600 Sobic010G070300--Sobic004G119600 Sobic002G101400 Sobic002G101400 Sobic010G113100--Sobic002G101400 Sobic010G028100 Sobic010G028100 Sobic010G113100--Sobic010G028100 Sobic006G092700 Sobic006G092700 Sobic010G113100--Sobic006G092700 Sobic010G113100--Sobic008G164450 Sobic006G135300 Sobic006G135300 Sobic010G113100--Sobic006G135300 Sobic007G057400 Sobic007G057400 Sobic010G113100--Sobic007G057400 Sobic002G216100 Sobic002G216100 Sobic010G113100--Sobic002G216100 Sobic010G113100--Sobic001G506800 Sobic001G360500 Sobic001G360500 Sobic010G113100--Sobic001G360500 Sobic001G360400--Sobic010G206800 Sobic001G360400--Sobic007G047500 Sobic001G360400--Sobic007G021900 Sobic005G037200 Sobic005G037200 Sobic001G360400--Sobic005G037200 Sobic008G148200 Sobic008G148200 Sobic001G360400--Sobic008G148200 Sobic001G360400--Sobic007G030501 Sobic001G147900 Sobic001G147900 Sobic001G360400--Sobic001G147900 Sobic002G261300 Sobic002G261300 Sobic001G360400--Sobic002G261300 Sobic001G360400--Sobic001G183700 Sobic003G182200 Sobic003G182200 Sobic007G100700--Sobic003G182200 Sobic003G426500 Sobic003G426500 Sobic007G100700--Sobic003G426500 Sobic007G008600 Sobic007G008600 Sobic007G100700--Sobic007G008600 Sobic002G255000 Sobic002G255000 Sobic007G100700--Sobic002G255000 Sobic007G100700--Sobic008G011700 Sobic010G066800 Sobic010G066800 Sobic007G100700--Sobic010G066800 Sobic006G106900 Sobic006G106900 Sobic007G100700--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic007G100700--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic007G100700--Sobic004G306900 Sobic006G003600--Sobic006G092700 Sobic006G003600--Sobic010G028100 Sobic010G082000 Sobic010G082000 Sobic006G003600--Sobic010G082000 Sobic006G003600--Sobic008G164450 Sobic004G119800 Sobic004G119800 Sobic006G003600--Sobic004G119800 Sobic006G003600--Sobic006G135300 Sobic006G003600--Sobic001G360500 Sobic004G333000 Sobic004G333000 Sobic006G003600--Sobic004G333000 Sobic002G146000 Sobic002G146000 Sobic006G003600--Sobic002G146000 Sobic010G214300--Sobic001G506800 Sobic003G007400 Sobic003G007400 Sobic010G214300--Sobic003G007400 Sobic001G342000 Sobic001G342000 Sobic010G214300--Sobic001G342000 Sobic008G010500 Sobic008G010500 Sobic010G214300--Sobic008G010500 Sobic007G186500 Sobic007G186500 Sobic010G214300--Sobic007G186500 Sobic010G214300--Sobic008G164450 Sobic010G214300--Sobic010G204200 Sobic010G214300--Sobic006G135300 Sobic007G135100 Sobic007G135100 Sobic010G214300--Sobic007G135100 Sobic008G164450--Sobic009G181600 Sobic008G164450--Sobic001G506800 Sobic008G164450--Sobic006G092700 Sobic008G164450--Sobic002G146000 Sobic008G164450--Sobic010G113100 Sobic008G164450--Sobic006G135300 Sobic008G164450--Sobic010G028100 Sobic008G164450--Sobic006G003600 Sobic007G037600 Sobic007G037600 Sobic008G164450--Sobic007G037600
Octagon: transcription factors


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