Gene annotation
Transcriptome id Sobic.007G047500.1
Synonym Sb07g003880, NGA3
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt C5YHA5
Pfam PF02362
Panther DB PTHR31140 PTHR31140:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT4G01500 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os08g06120.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052255 , Zm00025a000289 , Zm00025a000288 , Zm00025a000286 , Zm00025a003162 , Zm00025a000291 , Zm00025a055133
Brachypodium KQJ95321
Barley HORVU4Hr1G084950.1 , HORVU4Hr1G084950.2 , HORVU4Hr1G084950.3 , HORVU1Hr1G051780.2
Wheat TraesCS4D02G348900 , TraesCS4D02G348900 , TraesCS1A02G200500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.010G070300 DNA binding protein, putative, expressed -
3 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
4 Sobic.007G030501 - -
5 Sobic.004G212600 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
6 Sobic.010G206800 expressed protein -
7 Sobic.003G351600 expressed protein -
8 Sobic.010G204200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450 71D7, putative, expressed -
9 Sobic.007G021900 carrier, putative, expressed -
10 Sobic.002G216100 cytochrome P450, putative, expressed -
11 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
12 Sobic.002G261300 expressed protein -
13 Sobic.006G003600 transporter family protein, putative, expressed -
14 Sobic.002G228800 expressed protein -
15 Sobic.008G164450 - -
16 Sobic.006G251400 heavy metal-associated domain containing protein, expressed -
17 Sobic.001G183700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
18 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
19 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
20 Sobic.005G202200 integral membrane protein, putative, expressed -


Gene co-expression network
sample Sobic007G047500 Sobic007G047500 Sobic001G360400 Sobic001G360400 Sobic007G047500--Sobic001G360400 Sobic010G070300 Sobic010G070300 Sobic007G047500--Sobic010G070300 Sobic010G113100 Sobic010G113100 Sobic007G047500--Sobic010G113100 Sobic007G030501 Sobic007G030501 Sobic007G047500--Sobic007G030501 Sobic004G212600 Sobic004G212600 Sobic007G047500--Sobic004G212600 Sobic010G206800 Sobic010G206800 Sobic007G047500--Sobic010G206800 Sobic003G351600 Sobic003G351600 Sobic007G047500--Sobic003G351600 Sobic010G204200 Sobic010G204200 Sobic007G047500--Sobic010G204200 Sobic007G021900 Sobic007G021900 Sobic007G047500--Sobic007G021900 Sobic001G360400--Sobic010G206800 Sobic001G360400--Sobic007G047500 Sobic001G360400--Sobic007G021900 Sobic005G037200 Sobic005G037200 Sobic001G360400--Sobic005G037200 Sobic008G148200 Sobic008G148200 Sobic001G360400--Sobic008G148200 Sobic001G360400--Sobic007G030501 Sobic001G147900 Sobic001G147900 Sobic001G360400--Sobic001G147900 Sobic002G261300 Sobic002G261300 Sobic001G360400--Sobic002G261300 Sobic001G183700 Sobic001G183700 Sobic001G360400--Sobic001G183700 Sobic010G070300--Sobic001G183700 Sobic010G070300--Sobic007G047500 Sobic010G070300--Sobic010G113100 Sobic006G251400 Sobic006G251400 Sobic010G070300--Sobic006G251400 Sobic008G164450 Sobic008G164450 Sobic010G070300--Sobic008G164450 Sobic004G029100 Sobic004G029100 Sobic010G070300--Sobic004G029100 Sobic002G385500 Sobic002G385500 Sobic010G070300--Sobic002G385500 Sobic002G042200 Sobic002G042200 Sobic010G070300--Sobic002G042200 Sobic004G119600 Sobic004G119600 Sobic010G070300--Sobic004G119600 Sobic002G101400 Sobic002G101400 Sobic010G113100--Sobic002G101400 Sobic010G028100 Sobic010G028100 Sobic010G113100--Sobic010G028100 Sobic006G092700 Sobic006G092700 Sobic010G113100--Sobic006G092700 Sobic010G113100--Sobic008G164450 Sobic006G135300 Sobic006G135300 Sobic010G113100--Sobic006G135300 Sobic007G057400 Sobic007G057400 Sobic010G113100--Sobic007G057400 Sobic002G216100 Sobic002G216100 Sobic010G113100--Sobic002G216100 Sobic001G506800 Sobic001G506800 Sobic010G113100--Sobic001G506800 Sobic001G360500 Sobic001G360500 Sobic010G113100--Sobic001G360500 Sobic007G176100 Sobic007G176100 Sobic007G030501--Sobic007G176100 Sobic007G176000 Sobic007G176000 Sobic007G030501--Sobic007G176000 Sobic006G197100 Sobic006G197100 Sobic007G030501--Sobic006G197100 Sobic003G368600 Sobic003G368600 Sobic007G030501--Sobic003G368600 Sobic004G349125 Sobic004G349125 Sobic007G030501--Sobic004G349125 Sobic004G139300 Sobic004G139300 Sobic007G030501--Sobic004G139300 Sobic007G030501--Sobic002G261300 Sobic010G252500 Sobic010G252500 Sobic007G030501--Sobic010G252500 Sobic007G030501--Sobic002G042200 Sobic004G212600--Sobic007G047500 Sobic004G212600--Sobic010G204200 Sobic004G212600--Sobic010G070300 Sobic004G212600--Sobic010G113100 Sobic004G212600--Sobic001G360400 Sobic007G100700 Sobic007G100700 Sobic004G212600--Sobic007G100700 Sobic006G003600 Sobic006G003600 Sobic004G212600--Sobic006G003600 Sobic010G214300 Sobic010G214300 Sobic004G212600--Sobic010G214300 Sobic004G212600--Sobic008G164450 Sobic010G206800--Sobic001G360400 Sobic010G206800--Sobic007G030501 Sobic010G206800--Sobic003G368600 Sobic010G206800--Sobic002G261300 Sobic010G206800--Sobic007G047500 Sobic006G274933 Sobic006G274933 Sobic010G206800--Sobic006G274933 Sobic001G235800 Sobic001G235800 Sobic010G206800--Sobic001G235800 Sobic010G206800--Sobic010G252500 Sobic001G159900 Sobic001G159900 Sobic010G206800--Sobic001G159900 Sobic003G351600--Sobic002G042200 Sobic007G050200 Sobic007G050200 Sobic003G351600--Sobic007G050200 Sobic003G351600--Sobic004G139300 Sobic006G256900 Sobic006G256900 Sobic003G351600--Sobic006G256900 Sobic001G058300 Sobic001G058300 Sobic003G351600--Sobic001G058300 Sobic003G351600--Sobic010G113100 Sobic004G322100 Sobic004G322100 Sobic003G351600--Sobic004G322100 Sobic003G351600--Sobic002G216100 Sobic003G351600--Sobic002G101400 Sobic010G204200--Sobic010G214300 Sobic010G204200--Sobic001G506800 Sobic010G204200--Sobic010G113100 Sobic010G204200--Sobic007G100700 Sobic010G204200--Sobic008G164450 Sobic008G011700 Sobic008G011700 Sobic010G204200--Sobic008G011700 Sobic001G209300 Sobic001G209300 Sobic010G204200--Sobic001G209300 Sobic010G204200--Sobic007G047500 Sobic009G181600 Sobic009G181600 Sobic010G204200--Sobic009G181600 Sobic007G021900--Sobic006G003600 Sobic002G228800 Sobic002G228800 Sobic007G021900--Sobic002G228800 Sobic007G021900--Sobic001G360400 Sobic006G103300 Sobic006G103300 Sobic007G021900--Sobic006G103300 Sobic003G140700 Sobic003G140700 Sobic007G021900--Sobic003G140700 Sobic007G021900--Sobic007G100700 Sobic003G140600 Sobic003G140600 Sobic007G021900--Sobic003G140600 Sobic004G038700 Sobic004G038700 Sobic007G021900--Sobic004G038700 Sobic004G119800 Sobic004G119800 Sobic007G021900--Sobic004G119800
Octagon: transcription factors


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