Gene annotation
Transcriptome id Sobic.002G261300.1
Synonym Sb02g029600
Functional annotation expressed protein
UniProt C5X5A5
Pfam -
Panther DB PTHR33450 PTHR33450:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47920 : -
RAP-DB (Rice) LOC_Os09g33650.1 : expressed protein
MaizeGDB (Corn) Zm00025a047615
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G261300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G164400 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
2 Sobic.007G030501 - -
3 Sobic.001G159900 uncharacterized protein At4g06744 precursor, putative, expressed -
4 Sobic.004G234100 phosphoglycerate mutase, putative, expressed -
5 Sobic.001G434800 MYB-like transcription factor DIVARICATA, putative, expressed -
6 Sobic.006G277800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.002G354200 transporter family protein, putative, expressed -
9 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
10 Sobic.007G218800 "caffeoylCoA O-methyltransferase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ (54% identity with SbCCoAOMT/70.9% similarity)(PubMedID : 27457122)@Functions are not investigated(PubMedID : 29721721)@caffeoyl-CoA O-methyltransferase, putative, expressed K18883: tricin synthase
11 Sobic.010G206800 expressed protein -
12 Sobic.009G183900 ICE-like protease p20 domain containing protein, putative, expressed -
13 Sobic.001G256800 dirigent, putative, expressed -
14 Sobic.010G252500 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSAUR28 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
15 Sobic.001G264700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, putative, expressed -
16 Sobic.010G029700 tentative name(PubMedID : 31536532)@oxidoreductase, putative, expressed -
17 Sobic.008G148200 OsWAK116 - OsWAK receptor-like cytoplasmic kinase OsWAK-RLCK, expressed -
18 Sobic.005G110406 - K16223: protein FLOWERING LOCUS T
19 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
20 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -


Gene co-expression network
sample Sobic002G261300 Sobic002G261300 Sobic007G164400 Sobic007G164400 Sobic002G261300--Sobic007G164400 Sobic007G030501 Sobic007G030501 Sobic002G261300--Sobic007G030501 Sobic001G159900 Sobic001G159900 Sobic002G261300--Sobic001G159900 Sobic004G234100 Sobic004G234100 Sobic002G261300--Sobic004G234100 Sobic001G434800 Sobic001G434800 Sobic002G261300--Sobic001G434800 Sobic006G277800 Sobic006G277800 Sobic002G261300--Sobic006G277800 Sobic001G360400 Sobic001G360400 Sobic002G261300--Sobic001G360400 Sobic002G354200 Sobic002G354200 Sobic002G261300--Sobic002G354200 Sobic002G250000 Sobic002G250000 Sobic002G261300--Sobic002G250000 Sobic007G164400--Sobic002G261300 Sobic007G164400--Sobic001G434800 Sobic009G183900 Sobic009G183900 Sobic007G164400--Sobic009G183900 Sobic007G164400--Sobic006G277800 Sobic008G173500 Sobic008G173500 Sobic007G164400--Sobic008G173500 Sobic001G382900 Sobic001G382900 Sobic007G164400--Sobic001G382900 Sobic004G229400 Sobic004G229400 Sobic007G164400--Sobic004G229400 Sobic005G110406 Sobic005G110406 Sobic007G164400--Sobic005G110406 Sobic002G351300 Sobic002G351300 Sobic007G164400--Sobic002G351300 Sobic007G176100 Sobic007G176100 Sobic007G030501--Sobic007G176100 Sobic007G176000 Sobic007G176000 Sobic007G030501--Sobic007G176000 Sobic006G197100 Sobic006G197100 Sobic007G030501--Sobic006G197100 Sobic003G368600 Sobic003G368600 Sobic007G030501--Sobic003G368600 Sobic004G349125 Sobic004G349125 Sobic007G030501--Sobic004G349125 Sobic004G139300 Sobic004G139300 Sobic007G030501--Sobic004G139300 Sobic007G030501--Sobic002G261300 Sobic010G252500 Sobic010G252500 Sobic007G030501--Sobic010G252500 Sobic002G042200 Sobic002G042200 Sobic007G030501--Sobic002G042200 Sobic001G159900--Sobic002G261300 Sobic010G085800 Sobic010G085800 Sobic001G159900--Sobic010G085800 Sobic001G159900--Sobic007G030501 Sobic001G159900--Sobic007G164400 Sobic009G240600 Sobic009G240600 Sobic001G159900--Sobic009G240600 Sobic007G218800 Sobic007G218800 Sobic001G159900--Sobic007G218800 Sobic009G224500 Sobic009G224500 Sobic001G159900--Sobic009G224500 Sobic004G062500 Sobic004G062500 Sobic001G159900--Sobic004G062500 Sobic010G206800 Sobic010G206800 Sobic001G159900--Sobic010G206800 Sobic010G239500 Sobic010G239500 Sobic004G234100--Sobic010G239500 Sobic004G234100--Sobic002G261300 Sobic009G181800 Sobic009G181800 Sobic004G234100--Sobic009G181800 Sobic009G033300 Sobic009G033300 Sobic004G234100--Sobic009G033300 Sobic004G234100--Sobic007G030501 Sobic002G003800 Sobic002G003800 Sobic004G234100--Sobic002G003800 Sobic004G234100--Sobic002G250000 Sobic004G234100--Sobic007G176100 Sobic010G029700 Sobic010G029700 Sobic004G234100--Sobic010G029700 Sobic004G297900 Sobic004G297900 Sobic001G434800--Sobic004G297900 Sobic001G434800--Sobic007G164400 Sobic001G434800--Sobic004G229400 Sobic001G261509 Sobic001G261509 Sobic001G434800--Sobic001G261509 Sobic006G089000 Sobic006G089000 Sobic001G434800--Sobic006G089000 Sobic001G434800--Sobic002G261300 Sobic008G009400 Sobic008G009400 Sobic001G434800--Sobic008G009400 Sobic006G172550 Sobic006G172550 Sobic001G434800--Sobic006G172550 Sobic001G434800--Sobic001G382900 Sobic006G277500 Sobic006G277500 Sobic006G277800--Sobic006G277500 Sobic006G277800--Sobic005G110406 Sobic006G072201 Sobic006G072201 Sobic006G277800--Sobic006G072201 Sobic007G094300 Sobic007G094300 Sobic006G277800--Sobic007G094300 Sobic010G135100 Sobic010G135100 Sobic006G277800--Sobic010G135100 Sobic006G277800--Sobic002G261300 Sobic008G068300 Sobic008G068300 Sobic006G277800--Sobic008G068300 Sobic008G148200 Sobic008G148200 Sobic006G277800--Sobic008G148200 Sobic008G077550 Sobic008G077550 Sobic006G277800--Sobic008G077550 Sobic001G360400--Sobic010G206800 Sobic007G047500 Sobic007G047500 Sobic001G360400--Sobic007G047500 Sobic007G021900 Sobic007G021900 Sobic001G360400--Sobic007G021900 Sobic005G037200 Sobic005G037200 Sobic001G360400--Sobic005G037200 Sobic001G360400--Sobic008G148200 Sobic001G360400--Sobic007G030501 Sobic001G147900 Sobic001G147900 Sobic001G360400--Sobic001G147900 Sobic001G360400--Sobic002G261300 Sobic001G183700 Sobic001G183700 Sobic001G360400--Sobic001G183700 Sobic001G231700 Sobic001G231700 Sobic002G354200--Sobic001G231700 Sobic004G292900 Sobic004G292900 Sobic002G354200--Sobic004G292900 Sobic006G198700 Sobic006G198700 Sobic002G354200--Sobic006G198700 Sobic003G427800 Sobic003G427800 Sobic002G354200--Sobic003G427800 Sobic007G169900 Sobic007G169900 Sobic002G354200--Sobic007G169900 Sobic006G103000 Sobic006G103000 Sobic002G354200--Sobic006G103000 Sobic002G354200--Sobic009G183900 Sobic002G354200--Sobic009G240600 Sobic001G402200 Sobic001G402200 Sobic002G354200--Sobic001G402200 Sobic002G234400 Sobic002G234400 Sobic002G250000--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G250000--Sobic001G397300 Sobic002G250000--Sobic010G029700 Sobic008G186100 Sobic008G186100 Sobic002G250000--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic002G250000--Sobic005G011300 Sobic007G006300 Sobic007G006300 Sobic002G250000--Sobic007G006300 Sobic004G108200 Sobic004G108200 Sobic002G250000--Sobic004G108200 Sobic002G287100 Sobic002G287100 Sobic002G250000--Sobic002G287100 Sobic003G033900 Sobic003G033900 Sobic002G250000--Sobic003G033900
Octagon: transcription factors


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