Gene annotation
Transcriptome id Sobic.005G202200.2
Synonym Sb05g025790
Functional annotation integral membrane protein, putative, expressed
UniProt A0A1Z5RK41 , C5Y7C6
Pfam PF04535
Panther DB PTHR36488 PTHR36488:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g35230.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G025000 expressed protein -
2 Sobic.001G301300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
3 Sobic.007G047500 B3 DNA binding domain containing protein, expressed -
4 Sobic.009G076300 expressed protein -
5 Sobic.004G333000 hypothetical protein -
6 Sobic.008G164450 - -
7 Sobic.001G482000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
8 Sobic.004G164300 - -
9 Sobic.002G053700 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.002G101900 - -
11 Sobic.006G003600 transporter family protein, putative, expressed -
12 Sobic.001G301000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
13 Sobic.001G246700 O-methyltransferase, putative, expressed -
14 Sobic.002G080200 receptor protein kinase, putative, expressed -
15 Sobic.005G206000 dirigent, putative, expressed -
16 Sobic.001G232400 - -
17 Sobic.005G038300 embryogenesis transmembrane protein, putative, expressed -
18 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.002G228800 expressed protein -
20 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -


Gene co-expression network
sample Sobic005G202200 Sobic005G202200 Sobic007G025000 Sobic007G025000 Sobic005G202200--Sobic007G025000 Sobic001G301300 Sobic001G301300 Sobic005G202200--Sobic001G301300 Sobic007G047500 Sobic007G047500 Sobic005G202200--Sobic007G047500 Sobic009G076300 Sobic009G076300 Sobic005G202200--Sobic009G076300 Sobic004G333000 Sobic004G333000 Sobic005G202200--Sobic004G333000 Sobic008G164450 Sobic008G164450 Sobic005G202200--Sobic008G164450 Sobic001G482000 Sobic001G482000 Sobic005G202200--Sobic001G482000 Sobic004G164300 Sobic004G164300 Sobic005G202200--Sobic004G164300 Sobic002G053700 Sobic002G053700 Sobic005G202200--Sobic002G053700 Sobic007G025000--Sobic005G202200 Sobic005G038300 Sobic005G038300 Sobic007G025000--Sobic005G038300 Sobic002G101900 Sobic002G101900 Sobic007G025000--Sobic002G101900 Sobic007G025000--Sobic001G301300 Sobic004G009500 Sobic004G009500 Sobic007G025000--Sobic004G009500 Sobic003G384700 Sobic003G384700 Sobic007G025000--Sobic003G384700 Sobic007G025000--Sobic007G047500 Sobic006G122800 Sobic006G122800 Sobic007G025000--Sobic006G122800 Sobic008G181000 Sobic008G181000 Sobic007G025000--Sobic008G181000 Sobic001G301300--Sobic002G053700 Sobic001G238200 Sobic001G238200 Sobic001G301300--Sobic001G238200 Sobic001G058300 Sobic001G058300 Sobic001G301300--Sobic001G058300 Sobic005G063400 Sobic005G063400 Sobic001G301300--Sobic005G063400 Sobic002G377700 Sobic002G377700 Sobic001G301300--Sobic002G377700 Sobic006G172601 Sobic006G172601 Sobic001G301300--Sobic006G172601 Sobic001G238300 Sobic001G238300 Sobic001G301300--Sobic001G238300 Sobic001G301300--Sobic006G122800 Sobic007G057400 Sobic007G057400 Sobic001G301300--Sobic007G057400 Sobic001G360400 Sobic001G360400 Sobic007G047500--Sobic001G360400 Sobic010G070300 Sobic010G070300 Sobic007G047500--Sobic010G070300 Sobic010G113100 Sobic010G113100 Sobic007G047500--Sobic010G113100 Sobic007G030501 Sobic007G030501 Sobic007G047500--Sobic007G030501 Sobic004G212600 Sobic004G212600 Sobic007G047500--Sobic004G212600 Sobic010G206800 Sobic010G206800 Sobic007G047500--Sobic010G206800 Sobic003G351600 Sobic003G351600 Sobic007G047500--Sobic003G351600 Sobic010G204200 Sobic010G204200 Sobic007G047500--Sobic010G204200 Sobic007G021900 Sobic007G021900 Sobic007G047500--Sobic007G021900 Sobic004G008300 Sobic004G008300 Sobic009G076300--Sobic004G008300 Sobic003G204300 Sobic003G204300 Sobic009G076300--Sobic003G204300 Sobic003G204400 Sobic003G204400 Sobic009G076300--Sobic003G204400 Sobic009G004950 Sobic009G004950 Sobic009G076300--Sobic009G004950 Sobic007G066508 Sobic007G066508 Sobic009G076300--Sobic007G066508 Sobic005G220300 Sobic005G220300 Sobic009G076300--Sobic005G220300 Sobic002G009100 Sobic002G009100 Sobic009G076300--Sobic002G009100 Sobic006G003600 Sobic006G003600 Sobic004G333000--Sobic006G003600 Sobic005G224200 Sobic005G224200 Sobic004G333000--Sobic005G224200 Sobic004G333000--Sobic007G057400 Sobic006G092700 Sobic006G092700 Sobic004G333000--Sobic006G092700 Sobic004G119800 Sobic004G119800 Sobic004G333000--Sobic004G119800 Sobic010G082000 Sobic010G082000 Sobic004G333000--Sobic010G082000 Sobic001G360500 Sobic001G360500 Sobic004G333000--Sobic001G360500 Sobic002G259100 Sobic002G259100 Sobic004G333000--Sobic002G259100 Sobic006G135300 Sobic006G135300 Sobic004G333000--Sobic006G135300 Sobic009G181600 Sobic009G181600 Sobic008G164450--Sobic009G181600 Sobic001G506800 Sobic001G506800 Sobic008G164450--Sobic001G506800 Sobic008G164450--Sobic006G092700 Sobic002G146000 Sobic002G146000 Sobic008G164450--Sobic002G146000 Sobic008G164450--Sobic010G113100 Sobic008G164450--Sobic006G135300 Sobic010G028100 Sobic010G028100 Sobic008G164450--Sobic010G028100 Sobic008G164450--Sobic006G003600 Sobic007G037600 Sobic007G037600 Sobic008G164450--Sobic007G037600 Sobic007G186500 Sobic007G186500 Sobic001G482000--Sobic007G186500 Sobic005G206000 Sobic005G206000 Sobic001G482000--Sobic005G206000 Sobic010G013000 Sobic010G013000 Sobic001G482000--Sobic010G013000 Sobic010G268700 Sobic010G268700 Sobic001G482000--Sobic010G268700 Sobic008G010500 Sobic008G010500 Sobic001G482000--Sobic008G010500 Sobic001G482000--Sobic009G076300 Sobic001G301000 Sobic001G301000 Sobic001G482000--Sobic001G301000 Sobic001G231800 Sobic001G231800 Sobic001G482000--Sobic001G231800 Sobic002G025500 Sobic002G025500 Sobic001G482000--Sobic002G025500 Sobic004G164300--Sobic001G301000 Sobic004G164300--Sobic008G010500 Sobic001G014700 Sobic001G014700 Sobic004G164300--Sobic001G014700 Sobic004G164300--Sobic001G231800 Sobic004G164300--Sobic008G164450 Sobic005G202300 Sobic005G202300 Sobic004G164300--Sobic005G202300 Sobic004G121600 Sobic004G121600 Sobic004G164300--Sobic004G121600 Sobic005G119900 Sobic005G119900 Sobic004G164300--Sobic005G119900 Sobic006G251400 Sobic006G251400 Sobic004G164300--Sobic006G251400 Sobic006G277700 Sobic006G277700 Sobic002G053700--Sobic006G277700 Sobic002G053700--Sobic005G063400 Sobic003G053600 Sobic003G053600 Sobic002G053700--Sobic003G053600 Sobic001G379400 Sobic001G379400 Sobic002G053700--Sobic001G379400 Sobic002G053700--Sobic006G122800 Sobic002G053700--Sobic001G301300 Sobic006G174300 Sobic006G174300 Sobic002G053700--Sobic006G174300 Sobic002G050300 Sobic002G050300 Sobic002G053700--Sobic002G050300 Sobic004G009400 Sobic004G009400 Sobic002G053700--Sobic004G009400
Octagon: transcription factors


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