Gene annotation
Transcriptome id Sobic.007G025000.1
Synonym Sb07g002190
Functional annotation expressed protein
UniProt A0A1B6PFI1
Pfam PF12796 PF13962 PF13857
Panther DB PTHR24177:SF54 PTHR24177
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03500 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os09g15950.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G202200 integral membrane protein, putative, expressed -
2 Sobic.005G038300 embryogenesis transmembrane protein, putative, expressed -
3 Sobic.002G101900 - -
4 Sobic.001G301300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
5 Sobic.004G009500 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
6 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
7 Sobic.007G047500 B3 DNA binding domain containing protein, expressed -
8 Sobic.006G122800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.008G181000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR14 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
10 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
11 Sobic.002G053700 auxin-induced protein 5NG4, putative, expressed -
12 Sobic.007G057400 - -
13 Sobic.005G203200 cysteine-rich receptor-like protein kinase 21 precursor, putative, expressed -
14 Sobic.001G360400 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G228800 expressed protein -
16 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
17 Sobic.004G212600 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
18 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.003G059900 expansin precursor, putative, expressed -
20 Sobic.007G030501 - -


Gene co-expression network
sample Sobic007G025000 Sobic007G025000 Sobic005G202200 Sobic005G202200 Sobic007G025000--Sobic005G202200 Sobic005G038300 Sobic005G038300 Sobic007G025000--Sobic005G038300 Sobic002G101900 Sobic002G101900 Sobic007G025000--Sobic002G101900 Sobic001G301300 Sobic001G301300 Sobic007G025000--Sobic001G301300 Sobic004G009500 Sobic004G009500 Sobic007G025000--Sobic004G009500 Sobic003G384700 Sobic003G384700 Sobic007G025000--Sobic003G384700 Sobic007G047500 Sobic007G047500 Sobic007G025000--Sobic007G047500 Sobic006G122800 Sobic006G122800 Sobic007G025000--Sobic006G122800 Sobic008G181000 Sobic008G181000 Sobic007G025000--Sobic008G181000 Sobic005G202200--Sobic007G025000 Sobic005G202200--Sobic001G301300 Sobic005G202200--Sobic007G047500 Sobic009G076300 Sobic009G076300 Sobic005G202200--Sobic009G076300 Sobic004G333000 Sobic004G333000 Sobic005G202200--Sobic004G333000 Sobic008G164450 Sobic008G164450 Sobic005G202200--Sobic008G164450 Sobic001G482000 Sobic001G482000 Sobic005G202200--Sobic001G482000 Sobic004G164300 Sobic004G164300 Sobic005G202200--Sobic004G164300 Sobic002G053700 Sobic002G053700 Sobic005G202200--Sobic002G053700 Sobic005G038300--Sobic002G101900 Sobic005G038300--Sobic004G009500 Sobic005G038300--Sobic007G025000 Sobic007G057400 Sobic007G057400 Sobic005G038300--Sobic007G057400 Sobic005G038300--Sobic008G181000 Sobic005G080400 Sobic005G080400 Sobic005G038300--Sobic005G080400 Sobic003G360100 Sobic003G360100 Sobic005G038300--Sobic003G360100 Sobic002G228800 Sobic002G228800 Sobic005G038300--Sobic002G228800 Sobic005G038300--Sobic003G384700 Sobic002G101900--Sobic005G038300 Sobic002G101900--Sobic007G025000 Sobic005G107800 Sobic005G107800 Sobic002G101900--Sobic005G107800 Sobic002G101900--Sobic003G360100 Sobic002G101900--Sobic007G047500 Sobic007G030501 Sobic007G030501 Sobic002G101900--Sobic007G030501 Sobic009G033300 Sobic009G033300 Sobic002G101900--Sobic009G033300 Sobic002G101900--Sobic005G202200 Sobic002G101900--Sobic003G384700 Sobic001G301300--Sobic002G053700 Sobic001G238200 Sobic001G238200 Sobic001G301300--Sobic001G238200 Sobic001G058300 Sobic001G058300 Sobic001G301300--Sobic001G058300 Sobic005G063400 Sobic005G063400 Sobic001G301300--Sobic005G063400 Sobic002G377700 Sobic002G377700 Sobic001G301300--Sobic002G377700 Sobic006G172601 Sobic006G172601 Sobic001G301300--Sobic006G172601 Sobic001G238300 Sobic001G238300 Sobic001G301300--Sobic001G238300 Sobic001G301300--Sobic006G122800 Sobic001G301300--Sobic007G057400 Sobic004G009500--Sobic005G038300 Sobic002G101400 Sobic002G101400 Sobic004G009500--Sobic002G101400 Sobic007G176000 Sobic007G176000 Sobic004G009500--Sobic007G176000 Sobic004G009500--Sobic007G057400 Sobic004G009500--Sobic007G030501 Sobic010G113100 Sobic010G113100 Sobic004G009500--Sobic010G113100 Sobic005G046700 Sobic005G046700 Sobic004G009500--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic004G009500--Sobic007G165400 Sobic003G015300 Sobic003G015300 Sobic004G009500--Sobic003G015300 Sobic003G384700--Sobic006G122800 Sobic003G157600 Sobic003G157600 Sobic003G384700--Sobic003G157600 Sobic003G384700--Sobic005G063400 Sobic001G147900 Sobic001G147900 Sobic003G384700--Sobic001G147900 Sobic002G042200 Sobic002G042200 Sobic003G384700--Sobic002G042200 Sobic010G161800 Sobic010G161800 Sobic003G384700--Sobic010G161800 Sobic003G384700--Sobic005G080400 Sobic003G351600 Sobic003G351600 Sobic003G384700--Sobic003G351600 Sobic005G203200 Sobic005G203200 Sobic003G384700--Sobic005G203200 Sobic001G360400 Sobic001G360400 Sobic007G047500--Sobic001G360400 Sobic010G070300 Sobic010G070300 Sobic007G047500--Sobic010G070300 Sobic007G047500--Sobic010G113100 Sobic007G047500--Sobic007G030501 Sobic004G212600 Sobic004G212600 Sobic007G047500--Sobic004G212600 Sobic010G206800 Sobic010G206800 Sobic007G047500--Sobic010G206800 Sobic007G047500--Sobic003G351600 Sobic010G204200 Sobic010G204200 Sobic007G047500--Sobic010G204200 Sobic007G021900 Sobic007G021900 Sobic007G047500--Sobic007G021900 Sobic006G122800--Sobic003G384700 Sobic006G122800--Sobic002G042200 Sobic002G425000 Sobic002G425000 Sobic006G122800--Sobic002G425000 Sobic006G122800--Sobic002G053700 Sobic006G122800--Sobic005G063400 Sobic006G122800--Sobic010G161800 Sobic006G260200 Sobic006G260200 Sobic006G122800--Sobic006G260200 Sobic006G174300 Sobic006G174300 Sobic006G122800--Sobic006G174300 Sobic006G251400 Sobic006G251400 Sobic006G122800--Sobic006G251400 Sobic008G181000--Sobic004G009500 Sobic008G181000--Sobic005G038300 Sobic008G181000--Sobic007G057400 Sobic005G061200 Sobic005G061200 Sobic008G181000--Sobic005G061200 Sobic008G181000--Sobic007G030501 Sobic008G181000--Sobic007G176000 Sobic008G181000--Sobic007G025000 Sobic008G181000--Sobic007G047500 Sobic008G181000--Sobic005G203200
Octagon: transcription factors


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