Gene annotation
Transcriptome id Sobic.004G009500.1
Synonym ATNRT2.4, Sb04g001000, NRT2.4
Functional annotation transporter, major facilitator family, putative, expressed
UniProt C5XS81
Pfam PF07690
Panther DB PTHR23515 PTHR23515:SF2
NCBI CDD -
KEGG Orthology K02575; NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G60770 : nitrate transporter 2.4
RAP-DB (Rice) LOC_Os02g02190.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a035073 , Zm00025a035072 , Zm00025a018689
Brachypodium KQJ92869 , KQK06399 , KQJ92870 , PNT65714 , PNT65713
Barley HORVU6Hr1G005600.1 , HORVU6Hr1G005570.1 , HORVU6Hr1G005600.2 , HORVU6Hr1G005780.1 , HORVU6Hr1G005600.3 , HORVU6Hr1G005720.1 , HORVU6Hr1G005930.1 , HORVU6Hr1G005580.1
Wheat TraesCS6B02G044500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G038300 embryogenesis transmembrane protein, putative, expressed -
2 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
3 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
4 Sobic.007G057400 - -
5 Sobic.007G030501 - -
6 Sobic.010G113100 cytokinin-O-glucosyltransferase 2, putative, expressed -
7 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.007G165400 DNA binding protein, putative, expressed -
9 Sobic.003G015300 expressed protein -
10 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
11 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
12 Sobic.002G216100 cytochrome P450, putative, expressed -
13 Sobic.001G183700 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
14 Sobic.008G181000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR14 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
15 Sobic.007G176100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
16 Sobic.003G157600 expressed protein -
17 Sobic.001G360500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.007G178900 CXE carboxylesterase, putative, expressed -
19 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
20 Sobic.004G139300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450 71D10, putative, expressed -


Gene co-expression network
sample Sobic004G009500 Sobic004G009500 Sobic005G038300 Sobic005G038300 Sobic004G009500--Sobic005G038300 Sobic002G101400 Sobic002G101400 Sobic004G009500--Sobic002G101400 Sobic007G176000 Sobic007G176000 Sobic004G009500--Sobic007G176000 Sobic007G057400 Sobic007G057400 Sobic004G009500--Sobic007G057400 Sobic007G030501 Sobic007G030501 Sobic004G009500--Sobic007G030501 Sobic010G113100 Sobic010G113100 Sobic004G009500--Sobic010G113100 Sobic005G046700 Sobic005G046700 Sobic004G009500--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic004G009500--Sobic007G165400 Sobic003G015300 Sobic003G015300 Sobic004G009500--Sobic003G015300 Sobic002G101900 Sobic002G101900 Sobic005G038300--Sobic002G101900 Sobic005G038300--Sobic004G009500 Sobic007G025000 Sobic007G025000 Sobic005G038300--Sobic007G025000 Sobic005G038300--Sobic007G057400 Sobic008G181000 Sobic008G181000 Sobic005G038300--Sobic008G181000 Sobic005G080400 Sobic005G080400 Sobic005G038300--Sobic005G080400 Sobic003G360100 Sobic003G360100 Sobic005G038300--Sobic003G360100 Sobic002G228800 Sobic002G228800 Sobic005G038300--Sobic002G228800 Sobic003G384700 Sobic003G384700 Sobic005G038300--Sobic003G384700 Sobic002G101400--Sobic010G113100 Sobic001G360500 Sobic001G360500 Sobic002G101400--Sobic001G360500 Sobic002G101400--Sobic005G046700 Sobic006G092700 Sobic006G092700 Sobic002G101400--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic002G101400--Sobic007G170300 Sobic003G053600 Sobic003G053600 Sobic002G101400--Sobic003G053600 Sobic007G073000 Sobic007G073000 Sobic002G101400--Sobic007G073000 Sobic002G101400--Sobic007G057400 Sobic010G028100 Sobic010G028100 Sobic002G101400--Sobic010G028100 Sobic007G176100 Sobic007G176100 Sobic007G176000--Sobic007G176100 Sobic007G178900 Sobic007G178900 Sobic007G176000--Sobic007G178900 Sobic007G176000--Sobic007G030501 Sobic002G216100 Sobic002G216100 Sobic007G176000--Sobic002G216100 Sobic006G197100 Sobic006G197100 Sobic007G176000--Sobic006G197100 Sobic005G061200 Sobic005G061200 Sobic007G176000--Sobic005G061200 Sobic002G185800 Sobic002G185800 Sobic007G176000--Sobic002G185800 Sobic004G139300 Sobic004G139300 Sobic007G176000--Sobic004G139300 Sobic008G055100 Sobic008G055100 Sobic007G176000--Sobic008G055100 Sobic007G057400--Sobic001G360500 Sobic007G057400--Sobic010G113100 Sobic007G057400--Sobic003G053600 Sobic009G088500 Sobic009G088500 Sobic007G057400--Sobic009G088500 Sobic007G057400--Sobic002G101400 Sobic005G063400 Sobic005G063400 Sobic007G057400--Sobic005G063400 Sobic006G003600 Sobic006G003600 Sobic007G057400--Sobic006G003600 Sobic007G057400--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic007G057400--Sobic008G164450 Sobic007G030501--Sobic007G176100 Sobic007G030501--Sobic007G176000 Sobic007G030501--Sobic006G197100 Sobic003G368600 Sobic003G368600 Sobic007G030501--Sobic003G368600 Sobic004G349125 Sobic004G349125 Sobic007G030501--Sobic004G349125 Sobic007G030501--Sobic004G139300 Sobic002G261300 Sobic002G261300 Sobic007G030501--Sobic002G261300 Sobic010G252500 Sobic010G252500 Sobic007G030501--Sobic010G252500 Sobic002G042200 Sobic002G042200 Sobic007G030501--Sobic002G042200 Sobic010G113100--Sobic002G101400 Sobic010G113100--Sobic010G028100 Sobic010G113100--Sobic006G092700 Sobic010G113100--Sobic008G164450 Sobic006G135300 Sobic006G135300 Sobic010G113100--Sobic006G135300 Sobic010G113100--Sobic007G057400 Sobic010G113100--Sobic002G216100 Sobic001G506800 Sobic001G506800 Sobic010G113100--Sobic001G506800 Sobic010G113100--Sobic001G360500 Sobic005G046700--Sobic002G185800 Sobic005G046700--Sobic002G101400 Sobic005G046700--Sobic007G170300 Sobic005G046700--Sobic007G178900 Sobic005G046700--Sobic002G216100 Sobic005G046700--Sobic007G176100 Sobic002G404100 Sobic002G404100 Sobic005G046700--Sobic002G404100 Sobic005G046700--Sobic007G176000 Sobic005G046700--Sobic004G139300 Sobic007G165400--Sobic002G185800 Sobic003G203600 Sobic003G203600 Sobic007G165400--Sobic003G203600 Sobic007G165400--Sobic003G015300 Sobic001G067100 Sobic001G067100 Sobic007G165400--Sobic001G067100 Sobic007G165400--Sobic007G176000 Sobic001G264000 Sobic001G264000 Sobic007G165400--Sobic001G264000 Sobic010G110800 Sobic010G110800 Sobic007G165400--Sobic010G110800 Sobic007G165400--Sobic006G197100 Sobic002G001700 Sobic002G001700 Sobic007G165400--Sobic002G001700 Sobic003G015300--Sobic010G110800 Sobic005G065900 Sobic005G065900 Sobic003G015300--Sobic005G065900 Sobic003G015300--Sobic007G165400 Sobic003G015300--Sobic005G046700 Sobic003G015300--Sobic007G170300 Sobic003G152200 Sobic003G152200 Sobic003G015300--Sobic003G152200 Sobic003G015300--Sobic002G001700 Sobic003G015300--Sobic004G009500 Sobic003G028300 Sobic003G028300 Sobic003G015300--Sobic003G028300
Octagon: transcription factors


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