Gene annotation
Transcriptome id Sobic.005G038300.2,Sobic.005G038300.1
Synonym Sb05g003190
Functional annotation embryogenesis transmembrane protein, putative, expressed
UniProt A0A1B6PQ08 , A0A1B6PQ10
Pfam PF13962
Panther DB PTHR24177 PTHR24177:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11000 : Ankyrin repeat family protein
RAP-DB (Rice) LOC_Os06g19170.1 : cadmium tolerance factor, putative, expressed
MaizeGDB (Corn) Zm00025a050583 , Zm00025a039649 , Zm00025a001870 , Zm00025a050516
Brachypodium KQJ95251 , KQJ95252 , PNT66714 , PNT66715
Barley HORVU6Hr1G086440.14 , HORVU6Hr1G086440.15 , HORVU6Hr1G086440.16 , HORVU6Hr1G086440.17 , HORVU6Hr1G086440.10 , HORVU6Hr1G086440.11 , HORVU6Hr1G086440.12 , HORVU6Hr1G086440.13 , HORVU7Hr1G044100.18 , HORVU7Hr1G044100.19 , HORVU7Hr1G044100.12 , HORVU7Hr1G044100.13 , HORVU7Hr1G044100.10 , HORVU7Hr1G044100.11 , HORVU7Hr1G044100.16 , HORVU7Hr1G044100.17 , HORVU7Hr1G044100.15 , HORVU5Hr1G043010.1 , HORVU2Hr1G006360.2 , HORVU6Hr1G086440.8 , HORVU6Hr1G086440.9 , HORVU6Hr1G086440.6 , HORVU6Hr1G086440.7 , HORVU6Hr1G086440.4 , HORVU6Hr1G086440.5 , HORVU6Hr1G086440.2 , HORVU6Hr1G086440.3 , HORVU6Hr1G086440.1 , HORVU6Hr1G086570.2 , HORVU6Hr1G086570.3 , HORVU6Hr1G086570.1 , HORVU6Hr1G086570.6 , HORVU6Hr1G086570.4 , HORVU6Hr1G086570.5 , HORVU7Hr1G044100.1 , HORVU7Hr1G044100.2 , HORVU7Hr1G044100.3 , HORVU7Hr1G044100.4 , HORVU7Hr1G044100.5 , HORVU7Hr1G044100.6 , HORVU7Hr1G044100.7 , HORVU7Hr1G044100.8 , HORVU7Hr1G044100.9 , HORVU2Hr1G006360.3 , HORVU2Hr1G006360.1
Wheat TraesCS6A02G363100 , TraesCS6A02G363100 , TraesCS2D02G040400 , TraesCS7B02G124400 , TraesCS6D02G346600 , TraesCS6B02G396900 , TraesCS6B02G397400 , TraesCS7D02G147300 , TraesCS7A02G217400 , TraesCS7D02G219000 , TraesCS7B02G048200 , TraesCS6B02G387600 , TraesCS5A02G042100 , TraesCS6B02G397000 , TraesCS6A02G363500 , TraesCS6B02G396700 , TraesCS6B02G397100 , TraesCS5D02G140600 , TraesCS6B02G397300 , TraesCS6B02G397900 , TraesCS6D02G346900 , TraesCS7D02G218900 , TraesCS6D02G346500 , TraesCS6D02G346500 , TraesCS7D02G219100 , TraesCS6A02G363200 , TraesCS2A02G041700 , TraesCS2B02G054200 , TraesCS6B02G398100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G101900 - -
2 Sobic.004G009500 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
3 Sobic.007G025000 expressed protein -
4 Sobic.007G057400 - -
5 Sobic.008G181000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR14 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
6 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
7 Sobic.003G360100 expressed protein -
8 Sobic.002G228800 expressed protein -
9 Sobic.003G384700 pectinacetylesterase domain containing protein, expressed -
10 Sobic.002G216100 cytochrome P450, putative, expressed -
11 Sobic.007G047500 B3 DNA binding domain containing protein, expressed -
12 Sobic.002G101400 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
13 Sobic.005G202200 integral membrane protein, putative, expressed -
14 Sobic.007G030501 - -
15 Sobic.005G107800 chalcone synthase, putative, expressed -
16 Sobic.009G016300 ZOS5-02 - C2H2 zinc finger protein, expressed -
17 Sobic.007G176000 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
18 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
19 Sobic.005G046700 LTPL114 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.004G316500 tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha


Gene co-expression network
sample Sobic005G038300 Sobic005G038300 Sobic002G101900 Sobic002G101900 Sobic005G038300--Sobic002G101900 Sobic004G009500 Sobic004G009500 Sobic005G038300--Sobic004G009500 Sobic007G025000 Sobic007G025000 Sobic005G038300--Sobic007G025000 Sobic007G057400 Sobic007G057400 Sobic005G038300--Sobic007G057400 Sobic008G181000 Sobic008G181000 Sobic005G038300--Sobic008G181000 Sobic005G080400 Sobic005G080400 Sobic005G038300--Sobic005G080400 Sobic003G360100 Sobic003G360100 Sobic005G038300--Sobic003G360100 Sobic002G228800 Sobic002G228800 Sobic005G038300--Sobic002G228800 Sobic003G384700 Sobic003G384700 Sobic005G038300--Sobic003G384700 Sobic002G101900--Sobic005G038300 Sobic002G101900--Sobic007G025000 Sobic005G107800 Sobic005G107800 Sobic002G101900--Sobic005G107800 Sobic002G101900--Sobic003G360100 Sobic007G047500 Sobic007G047500 Sobic002G101900--Sobic007G047500 Sobic007G030501 Sobic007G030501 Sobic002G101900--Sobic007G030501 Sobic009G033300 Sobic009G033300 Sobic002G101900--Sobic009G033300 Sobic005G202200 Sobic005G202200 Sobic002G101900--Sobic005G202200 Sobic002G101900--Sobic003G384700 Sobic004G009500--Sobic005G038300 Sobic002G101400 Sobic002G101400 Sobic004G009500--Sobic002G101400 Sobic007G176000 Sobic007G176000 Sobic004G009500--Sobic007G176000 Sobic004G009500--Sobic007G057400 Sobic004G009500--Sobic007G030501 Sobic010G113100 Sobic010G113100 Sobic004G009500--Sobic010G113100 Sobic005G046700 Sobic005G046700 Sobic004G009500--Sobic005G046700 Sobic007G165400 Sobic007G165400 Sobic004G009500--Sobic007G165400 Sobic003G015300 Sobic003G015300 Sobic004G009500--Sobic003G015300 Sobic007G025000--Sobic005G202200 Sobic007G025000--Sobic005G038300 Sobic007G025000--Sobic002G101900 Sobic001G301300 Sobic001G301300 Sobic007G025000--Sobic001G301300 Sobic007G025000--Sobic004G009500 Sobic007G025000--Sobic003G384700 Sobic007G025000--Sobic007G047500 Sobic006G122800 Sobic006G122800 Sobic007G025000--Sobic006G122800 Sobic007G025000--Sobic008G181000 Sobic001G360500 Sobic001G360500 Sobic007G057400--Sobic001G360500 Sobic007G057400--Sobic010G113100 Sobic003G053600 Sobic003G053600 Sobic007G057400--Sobic003G053600 Sobic009G088500 Sobic009G088500 Sobic007G057400--Sobic009G088500 Sobic007G057400--Sobic002G101400 Sobic005G063400 Sobic005G063400 Sobic007G057400--Sobic005G063400 Sobic006G003600 Sobic006G003600 Sobic007G057400--Sobic006G003600 Sobic006G092700 Sobic006G092700 Sobic007G057400--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic007G057400--Sobic008G164450 Sobic008G181000--Sobic004G009500 Sobic008G181000--Sobic005G038300 Sobic008G181000--Sobic007G057400 Sobic005G061200 Sobic005G061200 Sobic008G181000--Sobic005G061200 Sobic008G181000--Sobic007G030501 Sobic008G181000--Sobic007G176000 Sobic008G181000--Sobic007G025000 Sobic008G181000--Sobic007G047500 Sobic005G203200 Sobic005G203200 Sobic008G181000--Sobic005G203200 Sobic005G080400--Sobic005G203200 Sobic005G080400--Sobic002G228800 Sobic004G038700 Sobic004G038700 Sobic005G080400--Sobic004G038700 Sobic005G202700 Sobic005G202700 Sobic005G080400--Sobic005G202700 Sobic005G080400--Sobic007G057400 Sobic009G035300 Sobic009G035300 Sobic005G080400--Sobic009G035300 Sobic002G326500 Sobic002G326500 Sobic005G080400--Sobic002G326500 Sobic003G351600 Sobic003G351600 Sobic005G080400--Sobic003G351600 Sobic005G166700 Sobic005G166700 Sobic005G080400--Sobic005G166700 Sobic003G360100--Sobic007G030501 Sobic003G360100--Sobic005G061200 Sobic006G197100 Sobic006G197100 Sobic003G360100--Sobic006G197100 Sobic003G360100--Sobic005G107800 Sobic003G360100--Sobic007G176000 Sobic002G320800 Sobic002G320800 Sobic003G360100--Sobic002G320800 Sobic002G042200 Sobic002G042200 Sobic003G360100--Sobic002G042200 Sobic003G360100--Sobic005G038300 Sobic003G360100--Sobic004G009500 Sobic002G228800--Sobic005G080400 Sobic001G058300 Sobic001G058300 Sobic002G228800--Sobic001G058300 Sobic007G021900 Sobic007G021900 Sobic002G228800--Sobic007G021900 Sobic001G232200 Sobic001G232200 Sobic002G228800--Sobic001G232200 Sobic002G228800--Sobic006G003600 Sobic003G000100 Sobic003G000100 Sobic002G228800--Sobic003G000100 Sobic002G228800--Sobic003G351600 Sobic002G228800--Sobic005G166700 Sobic002G216100 Sobic002G216100 Sobic002G228800--Sobic002G216100 Sobic003G384700--Sobic006G122800 Sobic003G157600 Sobic003G157600 Sobic003G384700--Sobic003G157600 Sobic003G384700--Sobic005G063400 Sobic001G147900 Sobic001G147900 Sobic003G384700--Sobic001G147900 Sobic003G384700--Sobic002G042200 Sobic010G161800 Sobic010G161800 Sobic003G384700--Sobic010G161800 Sobic003G384700--Sobic005G080400 Sobic003G384700--Sobic003G351600 Sobic003G384700--Sobic005G203200
Octagon: transcription factors


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