Gene annotation
Transcriptome id Sobic.009G016300.1
Synonym Sb09g001560
Functional annotation ZOS5-02 - C2H2 zinc finger protein, expressed
UniProt A0A1B6P5V0
Pfam PF13912
Panther DB PTHR26374 PTHR26374:SF197
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G59820 : C2H2-type zinc finger family protein
RAP-DB (Rice) LOC_Os05g02390.1 : ZOS5-02 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a051987 , Zm00025a026940 , Zm00025a040891 , Zm00025a001885
Brachypodium KQK07746
Barley HORVU6Hr1G092750.1 , HORVU2Hr1G097410.1 , HORVU1Hr1G006920.1 , HORVU1Hr1G006910.2 , HORVU1Hr1G006910.1 , HORVU5Hr1G095320.1 , HORVU6Hr1G092750.2 , HORVU3Hr1G057300.1
Wheat TraesCS1A02G040100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
2 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.003G255500 expressed protein -
4 Sobic.003G062600 limonoid UDP-glucosyltransferase, putative, expressed -
5 Sobic.003G255200 expressed protein -
6 Sobic.004G217800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
7 Sobic.003G437200 sulfotransferase domain containing protein, expressed -
8 Sobic.009G217700 - -
9 Sobic.003G417800 down-regulated TF in developmental senescence(PubMedID : 27586543)@histone-like transcription factor and archaeal histone, putative, expressed -
10 Sobic.004G107700 expressed protein -
11 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
12 Sobic.005G183100 sulfotransferase domain containing protein, expressed -
13 Sobic.010G136000 expressed protein -
14 Sobic.005G107800 chalcone synthase, putative, expressed -
15 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
16 Sobic.004G349125 - -
17 Sobic.001G481400 similar to AP2 domain containing protein(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@similar to AP2 domain containing protein(PubMedID : 24655390)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
18 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
19 Sobic.007G057000 expressed protein -
20 Sobic.009G179900 OsCML9 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin


Gene co-expression network
sample Sobic009G016300 Sobic009G016300 Sobic001G449600 Sobic001G449600 Sobic009G016300--Sobic001G449600 Sobic006G199800 Sobic006G199800 Sobic009G016300--Sobic006G199800 Sobic003G255500 Sobic003G255500 Sobic009G016300--Sobic003G255500 Sobic003G062600 Sobic003G062600 Sobic009G016300--Sobic003G062600 Sobic003G255200 Sobic003G255200 Sobic009G016300--Sobic003G255200 Sobic004G217800 Sobic004G217800 Sobic009G016300--Sobic004G217800 Sobic003G437200 Sobic003G437200 Sobic009G016300--Sobic003G437200 Sobic009G217700 Sobic009G217700 Sobic009G016300--Sobic009G217700 Sobic003G417800 Sobic003G417800 Sobic009G016300--Sobic003G417800 Sobic001G449600--Sobic009G217700 Sobic001G449600--Sobic003G255200 Sobic005G005600 Sobic005G005600 Sobic001G449600--Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic001G449600--Sobic003G319700 Sobic007G166000 Sobic007G166000 Sobic001G449600--Sobic007G166000 Sobic002G125700 Sobic002G125700 Sobic001G449600--Sobic002G125700 Sobic002G034800 Sobic002G034800 Sobic001G449600--Sobic002G034800 Sobic001G449600--Sobic003G255500 Sobic001G449600--Sobic009G016300 Sobic004G046200 Sobic004G046200 Sobic006G199800--Sobic004G046200 Sobic010G259600 Sobic010G259600 Sobic006G199800--Sobic010G259600 Sobic006G199800--Sobic003G255200 Sobic009G183400 Sobic009G183400 Sobic006G199800--Sobic009G183400 Sobic003G084400 Sobic003G084400 Sobic006G199800--Sobic003G084400 Sobic007G169900 Sobic007G169900 Sobic006G199800--Sobic007G169900 Sobic006G199800--Sobic003G255500 Sobic006G044100 Sobic006G044100 Sobic006G199800--Sobic006G044100 Sobic001G231700 Sobic001G231700 Sobic006G199800--Sobic001G231700 Sobic001G503100 Sobic001G503100 Sobic003G255500--Sobic001G503100 Sobic003G255500--Sobic003G255200 Sobic003G255500--Sobic006G199800 Sobic003G255500--Sobic001G449600 Sobic003G255500--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic003G255500--Sobic009G187200 Sobic004G107700 Sobic004G107700 Sobic003G255500--Sobic004G107700 Sobic004G348400 Sobic004G348400 Sobic003G255500--Sobic004G348400 Sobic001G161500 Sobic001G161500 Sobic003G255500--Sobic001G161500 Sobic003G062600--Sobic003G417800 Sobic003G062600--Sobic003G437200 Sobic001G119400 Sobic001G119400 Sobic003G062600--Sobic001G119400 Sobic003G062600--Sobic004G107700 Sobic003G062600--Sobic009G183400 Sobic003G062600--Sobic006G044100 Sobic005G183100 Sobic005G183100 Sobic003G062600--Sobic005G183100 Sobic003G062600--Sobic003G255200 Sobic004G176600 Sobic004G176600 Sobic003G062600--Sobic004G176600 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic008G172600 Sobic008G172600 Sobic003G255200--Sobic008G172600 Sobic003G255200--Sobic004G046200 Sobic003G255200--Sobic010G259600 Sobic003G255200--Sobic001G449600 Sobic007G087200 Sobic007G087200 Sobic003G255200--Sobic007G087200 Sobic003G255200--Sobic001G503100 Sobic003G255200--Sobic002G034800 Sobic006G249300 Sobic006G249300 Sobic004G217800--Sobic006G249300 Sobic004G217800--Sobic001G449600 Sobic004G217800--Sobic009G016300 Sobic004G217800--Sobic003G255200 Sobic007G057000 Sobic007G057000 Sobic004G217800--Sobic007G057000 Sobic010G136000 Sobic010G136000 Sobic004G217800--Sobic010G136000 Sobic004G217800--Sobic009G183400 Sobic004G217800--Sobic003G062600 Sobic001G476500 Sobic001G476500 Sobic004G217800--Sobic001G476500 Sobic003G437200--Sobic004G107700 Sobic003G437200--Sobic003G417800 Sobic006G084600 Sobic006G084600 Sobic003G437200--Sobic006G084600 Sobic003G437200--Sobic003G062600 Sobic001G403000 Sobic001G403000 Sobic003G437200--Sobic001G403000 Sobic007G155100 Sobic007G155100 Sobic003G437200--Sobic007G155100 Sobic003G437200--Sobic001G119400 Sobic003G437200--Sobic004G176600 Sobic002G375400 Sobic002G375400 Sobic003G437200--Sobic002G375400 Sobic009G217700--Sobic001G449600 Sobic003G364000 Sobic003G364000 Sobic009G217700--Sobic003G364000 Sobic009G217700--Sobic003G319700 Sobic009G217700--Sobic003G255200 Sobic009G139700 Sobic009G139700 Sobic009G217700--Sobic009G139700 Sobic009G217700--Sobic004G107700 Sobic009G217700--Sobic005G005600 Sobic009G217700--Sobic002G034800 Sobic005G013600 Sobic005G013600 Sobic009G217700--Sobic005G013600 Sobic003G417800--Sobic001G476500 Sobic003G417800--Sobic003G437200 Sobic003G417800--Sobic009G183400 Sobic003G417800--Sobic003G062600 Sobic003G417800--Sobic001G119400 Sobic003G417800--Sobic004G107700 Sobic006G099900 Sobic006G099900 Sobic003G417800--Sobic006G099900 Sobic003G352300 Sobic003G352300 Sobic003G417800--Sobic003G352300 Sobic009G240600 Sobic009G240600 Sobic003G417800--Sobic009G240600
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.