Gene annotation
Transcriptome id Sobic.007G028600.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5R8R4
Pfam PF01544
Panther DB PTHR21535 PTHR21535:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT2G04305 : Magnesium transporter CorA-like family protein
RAP-DB (Rice) LOC_Os08g03600.1 : expressed protein
MaizeGDB (Corn) Zm00025a030180
Brachypodium KQJ94948
Barley HORVU7Hr1G074050.5 , HORVU7Hr1G074050.4 , HORVU7Hr1G074050.7 , HORVU7Hr1G074050.6 , HORVU7Hr1G074050.1 , HORVU7Hr1G074050.3 , HORVU7Hr1G074050.2 , HORVU7Hr1G074050.8
Wheat TraesCS7B02G210400 , TraesCS7A02G310600 , TraesCS7D02G307100 , TraesCS7D02G307100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G212600 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
2 Sobic.001G507100 dirigent, putative, expressed -
3 Sobic.007G021800 carrier, putative, expressed -
4 Sobic.001G522200 - -
5 Sobic.009G150600 expressed protein -
6 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
7 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
8 Sobic.009G230900 expressed protein -
9 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
10 Sobic.010G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
11 Sobic.004G038700 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR5 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
13 Sobic.004G306900 amino acid transporter, putative, expressed -
14 Sobic.006G135300 expressed protein -
15 Sobic.001G238200 expansin precursor, putative, expressed -
16 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
17 Sobic.003G064800 dirigent, putative, expressed -
18 Sobic.010G241700 - -
19 Sobic.003G351600 expressed protein -
20 Sobic.007G008600 GLTP domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G028600 Sobic007G028600 Sobic004G212600 Sobic004G212600 Sobic007G028600--Sobic004G212600 Sobic001G507100 Sobic001G507100 Sobic007G028600--Sobic001G507100 Sobic007G021800 Sobic007G021800 Sobic007G028600--Sobic007G021800 Sobic001G522200 Sobic001G522200 Sobic007G028600--Sobic001G522200 Sobic009G150600 Sobic009G150600 Sobic007G028600--Sobic009G150600 Sobic001G058300 Sobic001G058300 Sobic007G028600--Sobic001G058300 Sobic006G256900 Sobic006G256900 Sobic007G028600--Sobic006G256900 Sobic009G230900 Sobic009G230900 Sobic007G028600--Sobic009G230900 Sobic007G100700 Sobic007G100700 Sobic007G028600--Sobic007G100700 Sobic007G047500 Sobic007G047500 Sobic004G212600--Sobic007G047500 Sobic010G204200 Sobic010G204200 Sobic004G212600--Sobic010G204200 Sobic010G070300 Sobic010G070300 Sobic004G212600--Sobic010G070300 Sobic010G113100 Sobic010G113100 Sobic004G212600--Sobic010G113100 Sobic001G360400 Sobic001G360400 Sobic004G212600--Sobic001G360400 Sobic004G212600--Sobic007G100700 Sobic006G003600 Sobic006G003600 Sobic004G212600--Sobic006G003600 Sobic010G214300 Sobic010G214300 Sobic004G212600--Sobic010G214300 Sobic008G164450 Sobic008G164450 Sobic004G212600--Sobic008G164450 Sobic001G414800 Sobic001G414800 Sobic001G507100--Sobic001G414800 Sobic006G106900 Sobic006G106900 Sobic001G507100--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic001G507100--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic001G507100--Sobic004G306900 Sobic007G086300 Sobic007G086300 Sobic001G507100--Sobic007G086300 Sobic004G106100 Sobic004G106100 Sobic001G507100--Sobic004G106100 Sobic006G133200 Sobic006G133200 Sobic001G507100--Sobic006G133200 Sobic003G319400 Sobic003G319400 Sobic001G507100--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic001G507100--Sobic005G202300 Sobic004G038700 Sobic004G038700 Sobic007G021800--Sobic004G038700 Sobic005G080400 Sobic005G080400 Sobic007G021800--Sobic005G080400 Sobic003G140600 Sobic003G140600 Sobic007G021800--Sobic003G140600 Sobic007G021800--Sobic009G150600 Sobic010G234500 Sobic010G234500 Sobic007G021800--Sobic010G234500 Sobic001G238200 Sobic001G238200 Sobic007G021800--Sobic001G238200 Sobic001G209300 Sobic001G209300 Sobic007G021800--Sobic001G209300 Sobic001G238000 Sobic001G238000 Sobic007G021800--Sobic001G238000 Sobic004G119800 Sobic004G119800 Sobic007G021800--Sobic004G119800 Sobic001G522200--Sobic001G507100 Sobic001G522200--Sobic001G414800 Sobic009G065700 Sobic009G065700 Sobic001G522200--Sobic009G065700 Sobic006G133300 Sobic006G133300 Sobic001G522200--Sobic006G133300 Sobic001G522200--Sobic006G106900 Sobic001G499900 Sobic001G499900 Sobic001G522200--Sobic001G499900 Sobic002G111900 Sobic002G111900 Sobic001G522200--Sobic002G111900 Sobic007G220400 Sobic007G220400 Sobic001G522200--Sobic007G220400 Sobic004G121600 Sobic004G121600 Sobic001G522200--Sobic004G121600 Sobic007G021700 Sobic007G021700 Sobic009G150600--Sobic007G021700 Sobic009G150600--Sobic007G021800 Sobic009G150600--Sobic004G038700 Sobic005G010100 Sobic005G010100 Sobic009G150600--Sobic005G010100 Sobic001G075300 Sobic001G075300 Sobic009G150600--Sobic001G075300 Sobic008G011700 Sobic008G011700 Sobic009G150600--Sobic008G011700 Sobic010G170150 Sobic010G170150 Sobic009G150600--Sobic010G170150 Sobic003G228600 Sobic003G228600 Sobic009G150600--Sobic003G228600 Sobic004G011100 Sobic004G011100 Sobic009G150600--Sobic004G011100 Sobic001G058300--Sobic001G238200 Sobic001G438200 Sobic001G438200 Sobic001G058300--Sobic001G438200 Sobic003G140700 Sobic003G140700 Sobic001G058300--Sobic003G140700 Sobic001G058300--Sobic003G319400 Sobic001G058300--Sobic004G306900 Sobic001G058300--Sobic005G202300 Sobic003G282200 Sobic003G282200 Sobic001G058300--Sobic003G282200 Sobic001G058300--Sobic006G106900 Sobic006G174300 Sobic006G174300 Sobic001G058300--Sobic006G174300 Sobic010G148800 Sobic010G148800 Sobic006G256900--Sobic010G148800 Sobic005G065900 Sobic005G065900 Sobic006G256900--Sobic005G065900 Sobic007G050200 Sobic007G050200 Sobic006G256900--Sobic007G050200 Sobic009G199001 Sobic009G199001 Sobic006G256900--Sobic009G199001 Sobic006G197100 Sobic006G197100 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic006G256900--Sobic003G140700 Sobic004G322100 Sobic004G322100 Sobic006G256900--Sobic004G322100 Sobic006G256900--Sobic001G058300 Sobic009G230900--Sobic001G058300 Sobic009G230900--Sobic001G438200 Sobic009G219200 Sobic009G219200 Sobic009G230900--Sobic009G219200 Sobic009G230900--Sobic006G256900 Sobic009G230900--Sobic003G282200 Sobic009G230900--Sobic003G319400 Sobic009G230900--Sobic004G306900 Sobic009G230900--Sobic003G064800 Sobic009G230900--Sobic010G148800 Sobic003G182200 Sobic003G182200 Sobic007G100700--Sobic003G182200 Sobic003G426500 Sobic003G426500 Sobic007G100700--Sobic003G426500 Sobic007G008600 Sobic007G008600 Sobic007G100700--Sobic007G008600 Sobic002G255000 Sobic002G255000 Sobic007G100700--Sobic002G255000 Sobic007G100700--Sobic008G011700 Sobic010G066800 Sobic010G066800 Sobic007G100700--Sobic010G066800 Sobic007G100700--Sobic006G106900 Sobic007G100700--Sobic003G064800 Sobic007G100700--Sobic004G306900
Octagon: transcription factors


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