Gene annotation
Transcriptome id Sobic.009G230900.1
Synonym Sb09g028370
Functional annotation expressed protein
UniProt A0A1B6PA31
Pfam -
Panther DB PTHR33869 PTHR33869:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g48730.1 : expressed protein
MaizeGDB (Corn) Zm00025a044550
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
2 Sobic.001G438200 expressed protein -
3 Sobic.009G219200 expressed protein -
4 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
5 Sobic.003G282200 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
6 Sobic.003G319400 receptor protein kinase, putative, expressed -
7 Sobic.004G306900 amino acid transporter, putative, expressed -
8 Sobic.003G064800 dirigent, putative, expressed -
9 Sobic.010G148800 WRKY31, expressed -
10 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -
11 Sobic.003G140700 peroxidase precursor, putative, expressed -
12 Sobic.007G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@patatin, putative, expressed -
13 Sobic.009G065800 - -
14 Sobic.009G199001 - -
15 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
17 Sobic.008G034900 PAN domain-containing protein At5g03700 precursor, putative, expressed -
18 Sobic.002G255000 AIR12, putative, expressed -
19 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
20 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic009G230900 Sobic009G230900 Sobic001G058300 Sobic001G058300 Sobic009G230900--Sobic001G058300 Sobic001G438200 Sobic001G438200 Sobic009G230900--Sobic001G438200 Sobic009G219200 Sobic009G219200 Sobic009G230900--Sobic009G219200 Sobic006G256900 Sobic006G256900 Sobic009G230900--Sobic006G256900 Sobic003G282200 Sobic003G282200 Sobic009G230900--Sobic003G282200 Sobic003G319400 Sobic003G319400 Sobic009G230900--Sobic003G319400 Sobic004G306900 Sobic004G306900 Sobic009G230900--Sobic004G306900 Sobic003G064800 Sobic003G064800 Sobic009G230900--Sobic003G064800 Sobic010G148800 Sobic010G148800 Sobic009G230900--Sobic010G148800 Sobic001G238200 Sobic001G238200 Sobic001G058300--Sobic001G238200 Sobic001G058300--Sobic001G438200 Sobic003G140700 Sobic003G140700 Sobic001G058300--Sobic003G140700 Sobic001G058300--Sobic003G319400 Sobic001G058300--Sobic004G306900 Sobic005G202300 Sobic005G202300 Sobic001G058300--Sobic005G202300 Sobic001G058300--Sobic003G282200 Sobic006G106900 Sobic006G106900 Sobic001G058300--Sobic006G106900 Sobic006G174300 Sobic006G174300 Sobic001G058300--Sobic006G174300 Sobic001G438200--Sobic003G064800 Sobic002G255000 Sobic002G255000 Sobic001G438200--Sobic002G255000 Sobic001G438200--Sobic003G140700 Sobic001G438200--Sobic003G319400 Sobic001G438200--Sobic009G219200 Sobic001G438200--Sobic006G106900 Sobic001G438200--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic001G438200--Sobic006G273300 Sobic004G322100 Sobic004G322100 Sobic001G438200--Sobic004G322100 Sobic009G219200--Sobic003G140700 Sobic009G219200--Sobic001G438200 Sobic001G237800 Sobic001G237800 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic009G219200--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic009G219200--Sobic006G079300 Sobic001G238000 Sobic001G238000 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic006G256900--Sobic010G148800 Sobic005G065900 Sobic005G065900 Sobic006G256900--Sobic005G065900 Sobic007G050200 Sobic007G050200 Sobic006G256900--Sobic007G050200 Sobic009G199001 Sobic009G199001 Sobic006G256900--Sobic009G199001 Sobic006G197100 Sobic006G197100 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic006G256900--Sobic003G140700 Sobic006G256900--Sobic004G322100 Sobic006G256900--Sobic001G058300 Sobic009G065800 Sobic009G065800 Sobic003G282200--Sobic009G065800 Sobic003G282200--Sobic003G319400 Sobic003G282200--Sobic001G438200 Sobic003G282200--Sobic001G058300 Sobic003G282200--Sobic006G106900 Sobic007G086300 Sobic007G086300 Sobic003G282200--Sobic007G086300 Sobic003G282200--Sobic005G202300 Sobic003G282200--Sobic002G255000 Sobic003G282200--Sobic004G306900 Sobic003G319400--Sobic006G106900 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic009G181600 Sobic009G181600 Sobic003G319400--Sobic009G181600 Sobic003G319400--Sobic007G086300 Sobic003G319400--Sobic003G282200 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic005G127400 Sobic005G127400 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic010G148800--Sobic005G065900 Sobic004G322800 Sobic004G322800 Sobic010G148800--Sobic004G322800 Sobic010G148800--Sobic006G256900 Sobic005G066432 Sobic005G066432 Sobic010G148800--Sobic005G066432 Sobic010G148800--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic010G148800--Sobic002G404100 Sobic002G042200 Sobic002G042200 Sobic010G148800--Sobic002G042200 Sobic010G148800--Sobic009G219200 Sobic010G148800--Sobic006G079300
Octagon: transcription factors


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