Gene annotation
Transcriptome id Sobic.010G241700.3,Sobic.010G241700.2
Synonym
Functional annotation -
UniProt A0A194YL53
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
2 Sobic.001G438200 expressed protein -
3 Sobic.001G062500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
4 Sobic.010G148800 WRKY31, expressed -
5 Sobic.007G100700 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
6 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
7 Sobic.003G319400 receptor protein kinase, putative, expressed -
8 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
9 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
10 Sobic.001G506800 exostosin family domain containing protein, expressed -
11 Sobic.003G182200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
12 Sobic.003G064800 dirigent, putative, expressed -
13 Sobic.002G255000 AIR12, putative, expressed -
14 Sobic.004G322100 hypro1, putative, expressed -
15 Sobic.009G219200 expressed protein -
16 Sobic.009G230900 expressed protein -
17 Sobic.006G133200 expressed protein -
18 Sobic.009G199001 - -
19 Sobic.007G008600 GLTP domain containing protein, putative, expressed -
20 Sobic.005G202300 integral membrane protein TIGR01569 containing protein, expressed -


Gene co-expression network
sample Sobic010G241700 Sobic010G241700 Sobic006G256900 Sobic006G256900 Sobic010G241700--Sobic006G256900 Sobic001G438200 Sobic001G438200 Sobic010G241700--Sobic001G438200 Sobic001G062500 Sobic001G062500 Sobic010G241700--Sobic001G062500 Sobic010G148800 Sobic010G148800 Sobic010G241700--Sobic010G148800 Sobic007G100700 Sobic007G100700 Sobic010G241700--Sobic007G100700 Sobic001G058300 Sobic001G058300 Sobic010G241700--Sobic001G058300 Sobic003G319400 Sobic003G319400 Sobic010G241700--Sobic003G319400 Sobic006G106900 Sobic006G106900 Sobic010G241700--Sobic006G106900 Sobic009G181600 Sobic009G181600 Sobic010G241700--Sobic009G181600 Sobic006G256900--Sobic010G148800 Sobic005G065900 Sobic005G065900 Sobic006G256900--Sobic005G065900 Sobic007G050200 Sobic007G050200 Sobic006G256900--Sobic007G050200 Sobic009G199001 Sobic009G199001 Sobic006G256900--Sobic009G199001 Sobic006G197100 Sobic006G197100 Sobic006G256900--Sobic006G197100 Sobic009G221500 Sobic009G221500 Sobic006G256900--Sobic009G221500 Sobic003G140700 Sobic003G140700 Sobic006G256900--Sobic003G140700 Sobic004G322100 Sobic004G322100 Sobic006G256900--Sobic004G322100 Sobic006G256900--Sobic001G058300 Sobic003G064800 Sobic003G064800 Sobic001G438200--Sobic003G064800 Sobic002G255000 Sobic002G255000 Sobic001G438200--Sobic002G255000 Sobic001G438200--Sobic003G140700 Sobic001G438200--Sobic003G319400 Sobic009G219200 Sobic009G219200 Sobic001G438200--Sobic009G219200 Sobic001G438200--Sobic006G106900 Sobic004G306900 Sobic004G306900 Sobic001G438200--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic001G438200--Sobic006G273300 Sobic001G438200--Sobic004G322100 Sobic001G062500--Sobic006G273300 Sobic001G062500--Sobic003G140700 Sobic004G209400 Sobic004G209400 Sobic001G062500--Sobic004G209400 Sobic006G274933 Sobic006G274933 Sobic001G062500--Sobic006G274933 Sobic006G225500 Sobic006G225500 Sobic001G062500--Sobic006G225500 Sobic002G183700 Sobic002G183700 Sobic001G062500--Sobic002G183700 Sobic001G062500--Sobic001G438200 Sobic001G062500--Sobic002G255000 Sobic007G090469 Sobic007G090469 Sobic001G062500--Sobic007G090469 Sobic010G148800--Sobic005G065900 Sobic004G322800 Sobic004G322800 Sobic010G148800--Sobic004G322800 Sobic010G148800--Sobic006G256900 Sobic005G066432 Sobic005G066432 Sobic010G148800--Sobic005G066432 Sobic010G148800--Sobic009G199001 Sobic002G404100 Sobic002G404100 Sobic010G148800--Sobic002G404100 Sobic002G042200 Sobic002G042200 Sobic010G148800--Sobic002G042200 Sobic010G148800--Sobic009G219200 Sobic006G079300 Sobic006G079300 Sobic010G148800--Sobic006G079300 Sobic003G182200 Sobic003G182200 Sobic007G100700--Sobic003G182200 Sobic003G426500 Sobic003G426500 Sobic007G100700--Sobic003G426500 Sobic007G008600 Sobic007G008600 Sobic007G100700--Sobic007G008600 Sobic007G100700--Sobic002G255000 Sobic008G011700 Sobic008G011700 Sobic007G100700--Sobic008G011700 Sobic010G066800 Sobic010G066800 Sobic007G100700--Sobic010G066800 Sobic007G100700--Sobic006G106900 Sobic007G100700--Sobic003G064800 Sobic007G100700--Sobic004G306900 Sobic001G238200 Sobic001G238200 Sobic001G058300--Sobic001G238200 Sobic001G058300--Sobic001G438200 Sobic001G058300--Sobic003G140700 Sobic001G058300--Sobic003G319400 Sobic001G058300--Sobic004G306900 Sobic005G202300 Sobic005G202300 Sobic001G058300--Sobic005G202300 Sobic003G282200 Sobic003G282200 Sobic001G058300--Sobic003G282200 Sobic001G058300--Sobic006G106900 Sobic006G174300 Sobic006G174300 Sobic001G058300--Sobic006G174300 Sobic003G319400--Sobic006G106900 Sobic003G319400--Sobic005G202300 Sobic003G319400--Sobic004G306900 Sobic003G319400--Sobic001G438200 Sobic003G319400--Sobic009G181600 Sobic007G086300 Sobic007G086300 Sobic003G319400--Sobic007G086300 Sobic003G319400--Sobic003G282200 Sobic003G319400--Sobic003G064800 Sobic003G280000 Sobic003G280000 Sobic003G319400--Sobic003G280000 Sobic006G106900--Sobic003G319400 Sobic006G106900--Sobic005G202300 Sobic006G106900--Sobic003G064800 Sobic001G414800 Sobic001G414800 Sobic006G106900--Sobic001G414800 Sobic006G106900--Sobic004G306900 Sobic001G507100 Sobic001G507100 Sobic006G106900--Sobic001G507100 Sobic006G106900--Sobic009G181600 Sobic006G106900--Sobic001G438200 Sobic006G106900--Sobic003G280000 Sobic009G181600--Sobic006G106900 Sobic009G181600--Sobic003G319400 Sobic009G181600--Sobic005G202300 Sobic006G092700 Sobic006G092700 Sobic009G181600--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic009G181600--Sobic008G164450 Sobic002G343100 Sobic002G343100 Sobic009G181600--Sobic002G343100 Sobic004G029400 Sobic004G029400 Sobic009G181600--Sobic004G029400 Sobic007G037600 Sobic007G037600 Sobic009G181600--Sobic007G037600 Sobic010G031700 Sobic010G031700 Sobic009G181600--Sobic010G031700
Octagon: transcription factors


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