Gene annotation
Transcriptome id Sobic.006G133200.1
Synonym Sb06g021310
Functional annotation expressed protein
UniProt A0A1Z5RDP7
Pfam PF04862
Panther DB PTHR31265 PTHR31265:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11420 : Protein of unknown function, DUF642
RAP-DB (Rice) LOC_Os04g41759.1 : expressed protein
MaizeGDB (Corn) Zm00025a010850 , Zm00025a028693 , Zm00025a010836 , Zm00025a010842 , Zm00025a010843
Brachypodium KQJ83353
Barley HORVU2Hr1G085440.3 , HORVU2Hr1G085440.2 , HORVU2Hr1G085440.1
Wheat TraesCS2A02G434700 , TraesCS2B02G455800 , TraesCS2D02G349900 , TraesCS2A02G351700 , TraesCS2D02G349800 , TraesCS2D02G432500 , TraesCS2B02G369900 , TraesCS2A02G351600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.009G181600 indole-3-acetate beta-glucosyltransferase, putative, expressed -
3 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
4 Sobic.007G007300 methyltransferase domain containing protein, expressed -
5 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
6 Sobic.004G308500 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
7 Sobic.001G507100 dirigent, putative, expressed -
8 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
9 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
10 Sobic.003G167300 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.004G306900 amino acid transporter, putative, expressed -
12 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
13 Sobic.010G031700 thaumatin, putative, expressed -
14 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
15 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
16 Sobic.001G416100 - -
17 Sobic.003G319400 receptor protein kinase, putative, expressed -
18 Sobic.004G271800 WRKY66, expressed -
19 Sobic.006G019700 transferase family protein, putative, expressed -
20 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -


Gene co-expression network
sample Sobic006G133200 Sobic006G133200 Sobic004G106100 Sobic004G106100 Sobic006G133200--Sobic004G106100 Sobic009G181600 Sobic009G181600 Sobic006G133200--Sobic009G181600 Sobic006G205700 Sobic006G205700 Sobic006G133200--Sobic006G205700 Sobic007G007300 Sobic007G007300 Sobic006G133200--Sobic007G007300 Sobic007G037600 Sobic007G037600 Sobic006G133200--Sobic007G037600 Sobic004G308500 Sobic004G308500 Sobic006G133200--Sobic004G308500 Sobic001G507100 Sobic001G507100 Sobic006G133200--Sobic001G507100 Sobic007G086300 Sobic007G086300 Sobic006G133200--Sobic007G086300 Sobic006G106900 Sobic006G106900 Sobic006G133200--Sobic006G106900 Sobic004G106100--Sobic007G086300 Sobic004G106100--Sobic006G205700 Sobic004G306900 Sobic004G306900 Sobic004G106100--Sobic004G306900 Sobic003G000100 Sobic003G000100 Sobic004G106100--Sobic003G000100 Sobic010G031700 Sobic010G031700 Sobic004G106100--Sobic010G031700 Sobic003G282300 Sobic003G282300 Sobic004G106100--Sobic003G282300 Sobic002G391400 Sobic002G391400 Sobic004G106100--Sobic002G391400 Sobic002G233200 Sobic002G233200 Sobic004G106100--Sobic002G233200 Sobic010G152400 Sobic010G152400 Sobic004G106100--Sobic010G152400 Sobic009G181600--Sobic006G106900 Sobic003G319400 Sobic003G319400 Sobic009G181600--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic009G181600--Sobic005G202300 Sobic006G092700 Sobic006G092700 Sobic009G181600--Sobic006G092700 Sobic008G164450 Sobic008G164450 Sobic009G181600--Sobic008G164450 Sobic002G343100 Sobic002G343100 Sobic009G181600--Sobic002G343100 Sobic004G029400 Sobic004G029400 Sobic009G181600--Sobic004G029400 Sobic009G181600--Sobic007G037600 Sobic009G181600--Sobic010G031700 Sobic006G205700--Sobic002G391400 Sobic003G441800 Sobic003G441800 Sobic006G205700--Sobic003G441800 Sobic006G205700--Sobic004G106100 Sobic003G167300 Sobic003G167300 Sobic006G205700--Sobic003G167300 Sobic010G241900 Sobic010G241900 Sobic006G205700--Sobic010G241900 Sobic005G046400 Sobic005G046400 Sobic006G205700--Sobic005G046400 Sobic007G206800 Sobic007G206800 Sobic006G205700--Sobic007G206800 Sobic003G441601 Sobic003G441601 Sobic006G205700--Sobic003G441601 Sobic003G095100 Sobic003G095100 Sobic006G205700--Sobic003G095100 Sobic007G090600 Sobic007G090600 Sobic007G007300--Sobic007G090600 Sobic004G322000 Sobic004G322000 Sobic007G007300--Sobic004G322000 Sobic007G007300--Sobic003G095100 Sobic007G007300--Sobic003G282300 Sobic007G007300--Sobic004G308500 Sobic003G215300 Sobic003G215300 Sobic007G007300--Sobic003G215300 Sobic007G007300--Sobic006G133200 Sobic004G014600 Sobic004G014600 Sobic007G007300--Sobic004G014600 Sobic005G052700 Sobic005G052700 Sobic007G007300--Sobic005G052700 Sobic007G037600--Sobic003G441800 Sobic003G353200 Sobic003G353200 Sobic007G037600--Sobic003G353200 Sobic007G037600--Sobic010G031700 Sobic002G146000 Sobic002G146000 Sobic007G037600--Sobic002G146000 Sobic003G053200 Sobic003G053200 Sobic007G037600--Sobic003G053200 Sobic007G037600--Sobic004G029400 Sobic001G181600 Sobic001G181600 Sobic007G037600--Sobic001G181600 Sobic001G301000 Sobic001G301000 Sobic007G037600--Sobic001G301000 Sobic007G037600--Sobic006G205700 Sobic002G289500 Sobic002G289500 Sobic004G308500--Sobic002G289500 Sobic004G308500--Sobic004G014600 Sobic004G121600 Sobic004G121600 Sobic004G308500--Sobic004G121600 Sobic001G415100 Sobic001G415100 Sobic004G308500--Sobic001G415100 Sobic007G111800 Sobic007G111800 Sobic004G308500--Sobic007G111800 Sobic004G308500--Sobic005G046400 Sobic005G106300 Sobic005G106300 Sobic004G308500--Sobic005G106300 Sobic006G097900 Sobic006G097900 Sobic004G308500--Sobic006G097900 Sobic004G308500--Sobic003G441800 Sobic001G414800 Sobic001G414800 Sobic001G507100--Sobic001G414800 Sobic001G507100--Sobic006G106900 Sobic003G064800 Sobic003G064800 Sobic001G507100--Sobic003G064800 Sobic001G507100--Sobic004G306900 Sobic001G507100--Sobic007G086300 Sobic001G507100--Sobic004G106100 Sobic001G507100--Sobic006G133200 Sobic001G507100--Sobic003G319400 Sobic001G507100--Sobic005G202300 Sobic007G086300--Sobic004G106100 Sobic007G086300--Sobic004G306900 Sobic007G086300--Sobic003G064800 Sobic007G086300--Sobic006G205700 Sobic007G086300--Sobic003G000100 Sobic002G392100 Sobic002G392100 Sobic007G086300--Sobic002G392100 Sobic001G319300 Sobic001G319300 Sobic007G086300--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic007G086300--Sobic008G034900 Sobic007G086300--Sobic003G319400 Sobic006G106900--Sobic003G319400 Sobic006G106900--Sobic005G202300 Sobic006G106900--Sobic003G064800 Sobic006G106900--Sobic001G414800 Sobic006G106900--Sobic004G306900 Sobic006G106900--Sobic001G507100 Sobic006G106900--Sobic009G181600 Sobic001G438200 Sobic001G438200 Sobic006G106900--Sobic001G438200 Sobic003G280000 Sobic003G280000 Sobic006G106900--Sobic003G280000
Octagon: transcription factors


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