Gene annotation
Transcriptome id Sobic.004G038700.1
Synonym Sb04g003330, SbSAUR34, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
OsSAUR5 - Auxin-responsive SAUR gene family member, expressed
UniProt C5XUL0
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF6
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT2G24400 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os02g05060.1 : OsSAUR5 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G140600 peroxidase precursor, putative, expressed -
2 Sobic.005G010100 BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed K10523: speckle-type POZ protein
3 Sobic.003G228600 cytochrome P450 72A1, putative, expressed -
4 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
5 Sobic.001G238000 expansin precursor, putative, expressed -
6 Sobic.001G238200 expansin precursor, putative, expressed -
7 Sobic.005G080400 1-aminocyclopropane-1-carboxylate oxidase 2, putative, expressed -
8 Sobic.004G110700 DNA binding protein, putative, expressed -
9 Sobic.010G234500 O-methyltransferase, putative, expressed -
10 Sobic.003G140700 peroxidase precursor, putative, expressed -
11 Sobic.004G322100 hypro1, putative, expressed -
12 Sobic.009G035300 expressed protein -
13 Sobic.006G019700 transferase family protein, putative, expressed -
14 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
15 Sobic.007G057400 - -
16 Sobic.004G323300 SCP-like extracellular protein, expressed -
17 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
18 Sobic.009G088500 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
20 Sobic.001G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory protein, putative, expressed -


Gene co-expression network
sample Sobic004G038700 Sobic004G038700 Sobic003G140600 Sobic003G140600 Sobic004G038700--Sobic003G140600 Sobic005G010100 Sobic005G010100 Sobic004G038700--Sobic005G010100 Sobic003G228600 Sobic003G228600 Sobic004G038700--Sobic003G228600 Sobic003G203600 Sobic003G203600 Sobic004G038700--Sobic003G203600 Sobic001G238000 Sobic001G238000 Sobic004G038700--Sobic001G238000 Sobic001G238200 Sobic001G238200 Sobic004G038700--Sobic001G238200 Sobic005G080400 Sobic005G080400 Sobic004G038700--Sobic005G080400 Sobic004G110700 Sobic004G110700 Sobic004G038700--Sobic004G110700 Sobic010G234500 Sobic010G234500 Sobic004G038700--Sobic010G234500 Sobic010G088800 Sobic010G088800 Sobic003G140600--Sobic010G088800 Sobic003G140600--Sobic004G038700 Sobic006G172601 Sobic006G172601 Sobic003G140600--Sobic006G172601 Sobic008G121900 Sobic008G121900 Sobic003G140600--Sobic008G121900 Sobic006G103300 Sobic006G103300 Sobic003G140600--Sobic006G103300 Sobic003G140600--Sobic001G238200 Sobic003G140600--Sobic003G228600 Sobic007G021900 Sobic007G021900 Sobic003G140600--Sobic007G021900 Sobic003G140700 Sobic003G140700 Sobic003G140600--Sobic003G140700 Sobic005G010100--Sobic004G038700 Sobic009G035300 Sobic009G035300 Sobic005G010100--Sobic009G035300 Sobic001G264000 Sobic001G264000 Sobic005G010100--Sobic001G264000 Sobic005G010100--Sobic003G203600 Sobic007G165400 Sobic007G165400 Sobic005G010100--Sobic007G165400 Sobic004G011100 Sobic004G011100 Sobic005G010100--Sobic004G011100 Sobic005G010100--Sobic003G228600 Sobic005G010100--Sobic005G080400 Sobic004G349125 Sobic004G349125 Sobic005G010100--Sobic004G349125 Sobic003G228600--Sobic004G349125 Sobic005G156500 Sobic005G156500 Sobic003G228600--Sobic005G156500 Sobic003G228600--Sobic004G038700 Sobic006G197100 Sobic006G197100 Sobic003G228600--Sobic006G197100 Sobic001G416200 Sobic001G416200 Sobic003G228600--Sobic001G416200 Sobic008G011700 Sobic008G011700 Sobic003G228600--Sobic008G011700 Sobic003G228600--Sobic001G264000 Sobic001G067100 Sobic001G067100 Sobic003G228600--Sobic001G067100 Sobic006G274933 Sobic006G274933 Sobic003G228600--Sobic006G274933 Sobic003G203600--Sobic001G067100 Sobic002G195600 Sobic002G195600 Sobic003G203600--Sobic002G195600 Sobic006G135300 Sobic006G135300 Sobic003G203600--Sobic006G135300 Sobic010G082000 Sobic010G082000 Sobic003G203600--Sobic010G082000 Sobic003G426500 Sobic003G426500 Sobic003G203600--Sobic003G426500 Sobic006G028400 Sobic006G028400 Sobic003G203600--Sobic006G028400 Sobic006G092700 Sobic006G092700 Sobic003G203600--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic003G203600--Sobic007G170300 Sobic003G203600--Sobic004G038700 Sobic002G377700 Sobic002G377700 Sobic001G238000--Sobic002G377700 Sobic001G238000--Sobic001G238200 Sobic001G238000--Sobic003G140700 Sobic001G237800 Sobic001G237800 Sobic001G238000--Sobic001G237800 Sobic004G306900 Sobic004G306900 Sobic001G238000--Sobic004G306900 Sobic009G219200 Sobic009G219200 Sobic001G238000--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic001G238000--Sobic003G064800 Sobic010G162800 Sobic010G162800 Sobic001G238000--Sobic010G162800 Sobic006G028500 Sobic006G028500 Sobic001G238000--Sobic006G028500 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238200--Sobic001G238000 Sobic001G238200--Sobic010G234500 Sobic006G106900 Sobic006G106900 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic005G203200 Sobic005G203200 Sobic005G080400--Sobic005G203200 Sobic002G228800 Sobic002G228800 Sobic005G080400--Sobic002G228800 Sobic005G080400--Sobic004G038700 Sobic005G202700 Sobic005G202700 Sobic005G080400--Sobic005G202700 Sobic007G057400 Sobic007G057400 Sobic005G080400--Sobic007G057400 Sobic005G080400--Sobic009G035300 Sobic002G326500 Sobic002G326500 Sobic005G080400--Sobic002G326500 Sobic003G351600 Sobic003G351600 Sobic005G080400--Sobic003G351600 Sobic005G166700 Sobic005G166700 Sobic005G080400--Sobic005G166700 Sobic004G110700--Sobic006G028500 Sobic003G269600 Sobic003G269600 Sobic004G110700--Sobic003G269600 Sobic006G150100 Sobic006G150100 Sobic004G110700--Sobic006G150100 Sobic004G110700--Sobic003G140700 Sobic002G003700 Sobic002G003700 Sobic004G110700--Sobic002G003700 Sobic004G322100 Sobic004G322100 Sobic004G110700--Sobic004G322100 Sobic005G127400 Sobic005G127400 Sobic004G110700--Sobic005G127400 Sobic001G229000 Sobic001G229000 Sobic004G110700--Sobic001G229000 Sobic006G019700 Sobic006G019700 Sobic004G110700--Sobic006G019700 Sobic003G349400 Sobic003G349400 Sobic010G234500--Sobic003G349400 Sobic010G234500--Sobic003G064800 Sobic010G234500--Sobic005G127400 Sobic010G234500--Sobic002G255000 Sobic010G234500--Sobic001G238200 Sobic009G186500 Sobic009G186500 Sobic010G234500--Sobic009G186500 Sobic002G068000 Sobic002G068000 Sobic010G234500--Sobic002G068000 Sobic010G234500--Sobic004G306900 Sobic010G234500--Sobic006G019700
Octagon: transcription factors


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