Gene annotation
Transcriptome id Sobic.001G428600.2
Synonym Sb01g040270
Functional annotation nodulation-signaling pathway 2 protein, putative, expressed
UniProt A0A1Z5SAP1
Pfam PF03514
Panther DB PTHR31636 PTHR31636:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08250 : GRAS family transcription factor
RAP-DB (Rice) LOC_Os03g15680.1 : nodulation-signaling pathway 2 protein, putative, expressed
MaizeGDB (Corn) Zm00025a017028 , Zm00025a001702 , Zm00025a007785
Brachypodium KQK22458
Barley HORVU4Hr1G061310.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
2 Sobic.001G508532 - -
3 Sobic.001G237900 expansin precursor, putative, expressed -
4 Sobic.010G196000 DNA binding protein, putative, expressed -
5 Sobic.008G127933 - -
6 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
7 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.006G158400 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.010G158500 Zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.002G124500 expansin precursor, putative, expressed -
11 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.002G105300 SCP-like extracellular protein, expressed -
13 Sobic.008G158800 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.002G425000 VQ domain containing protein, putative, expressed -
15 Sobic.007G204700 expressed protein -
16 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
18 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
19 Sobic.007G090469 - -
20 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP


Gene co-expression network
sample Sobic001G428600 Sobic001G428600 Sobic006G202600 Sobic006G202600 Sobic001G428600--Sobic006G202600 Sobic001G508532 Sobic001G508532 Sobic001G428600--Sobic001G508532 Sobic001G237900 Sobic001G237900 Sobic001G428600--Sobic001G237900 Sobic010G196000 Sobic010G196000 Sobic001G428600--Sobic010G196000 Sobic008G127933 Sobic008G127933 Sobic001G428600--Sobic008G127933 Sobic005G213600 Sobic005G213600 Sobic001G428600--Sobic005G213600 Sobic003G053300 Sobic003G053300 Sobic001G428600--Sobic003G053300 Sobic006G158400 Sobic006G158400 Sobic001G428600--Sobic006G158400 Sobic010G158500 Sobic010G158500 Sobic001G428600--Sobic010G158500 Sobic004G180700 Sobic004G180700 Sobic006G202600--Sobic004G180700 Sobic006G202600--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic006G202600--Sobic004G295100 Sobic006G170600 Sobic006G170600 Sobic006G202600--Sobic006G170600 Sobic004G301600 Sobic004G301600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G050800 Sobic006G050800 Sobic006G202600--Sobic006G050800 Sobic006G202600--Sobic001G508532 Sobic007G090469 Sobic007G090469 Sobic006G202600--Sobic007G090469 Sobic001G508532--Sobic006G202600 Sobic002G124500 Sobic002G124500 Sobic001G508532--Sobic002G124500 Sobic004G318700 Sobic004G318700 Sobic001G508532--Sobic004G318700 Sobic001G508532--Sobic010G196000 Sobic001G508532--Sobic004G295100 Sobic005G067500 Sobic005G067500 Sobic001G508532--Sobic005G067500 Sobic010G106500 Sobic010G106500 Sobic001G508532--Sobic010G106500 Sobic001G264000 Sobic001G264000 Sobic001G508532--Sobic001G264000 Sobic001G508532--Sobic006G170600 Sobic001G238400 Sobic001G238400 Sobic001G237900--Sobic001G238400 Sobic001G237900--Sobic010G158500 Sobic001G237900--Sobic003G053300 Sobic001G237900--Sobic006G158400 Sobic002G425000 Sobic002G425000 Sobic001G237900--Sobic002G425000 Sobic004G202400 Sobic004G202400 Sobic001G237900--Sobic004G202400 Sobic001G304100 Sobic001G304100 Sobic001G237900--Sobic001G304100 Sobic010G063000 Sobic010G063000 Sobic001G237900--Sobic010G063000 Sobic002G213600 Sobic002G213600 Sobic001G237900--Sobic002G213600 Sobic010G196000--Sobic004G295100 Sobic010G196000--Sobic006G202600 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic002G105300 Sobic002G105300 Sobic010G196000--Sobic002G105300 Sobic001G330300 Sobic001G330300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic010G196000--Sobic005G067500 Sobic008G127933--Sobic006G158400 Sobic008G127933--Sobic002G425000 Sobic008G127933--Sobic001G237900 Sobic007G204700 Sobic007G204700 Sobic008G127933--Sobic007G204700 Sobic008G128066 Sobic008G128066 Sobic008G127933--Sobic008G128066 Sobic010G270700 Sobic010G270700 Sobic008G127933--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic008G127933--Sobic008G009400 Sobic008G127933--Sobic001G238400 Sobic008G127933--SobicK026900 Sobic010G156500 Sobic010G156500 Sobic005G213600--Sobic010G156500 Sobic005G213500 Sobic005G213500 Sobic005G213600--Sobic005G213500 Sobic010G043900 Sobic010G043900 Sobic005G213600--Sobic010G043900 Sobic003G364300 Sobic003G364300 Sobic005G213600--Sobic003G364300 Sobic005G213600--Sobic001G238400 Sobic005G107900 Sobic005G107900 Sobic005G213600--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic005G213600--Sobic001G502400 Sobic007G008100 Sobic007G008100 Sobic005G213600--Sobic007G008100 Sobic001G313600 Sobic001G313600 Sobic005G213600--Sobic001G313600 Sobic003G053300--Sobic001G237900 Sobic003G053300--Sobic002G213600 Sobic005G073000 Sobic005G073000 Sobic003G053300--Sobic005G073000 Sobic003G053300--Sobic001G304100 Sobic003G053300--Sobic002G425000 Sobic003G053300--Sobic004G295100 Sobic003G053300--Sobic002G124500 Sobic003G053300--Sobic001G238400 Sobic003G053400 Sobic003G053400 Sobic003G053300--Sobic003G053400 Sobic006G158400--Sobic008G127933 Sobic008G027600 Sobic008G027600 Sobic006G158400--Sobic008G027600 Sobic006G158400--Sobic001G237900 Sobic006G158400--Sobic010G158500 Sobic006G158400--Sobic007G204700 Sobic003G007600 Sobic003G007600 Sobic006G158400--Sobic003G007600 Sobic006G158400--Sobic010G043900 Sobic001G318500 Sobic001G318500 Sobic006G158400--Sobic001G318500 Sobic003G299300 Sobic003G299300 Sobic006G158400--Sobic003G299300 Sobic010G158500--Sobic001G237900 Sobic010G158500--Sobic006G158400 Sobic010G158500--Sobic007G204700 Sobic010G158500--Sobic002G124500 Sobic010G158500--SobicK026900 Sobic010G158500--Sobic010G063000 Sobic010G158500--Sobic004G202400 Sobic010G158500--Sobic008G127933 Sobic005G066100 Sobic005G066100 Sobic010G158500--Sobic005G066100
Octagon: transcription factors


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