Gene annotation
Transcriptome id Sobic.002G105300.1
Synonym Sb02g008970
Functional annotation SCP-like extracellular protein, expressed
UniProt C5X3J7
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF195
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G19690 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os07g03710.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a036306 , Zm00025a002913 , Zm00025a044951 , Zm00025a045588 , Zm00025a044959
Brachypodium KQK20924 , KQK20923
Barley HORVU3Hr1G114790.1 , HORVU0Hr1G026540.1 , HORVU0Hr1G026530.1 , HORVU0Hr1G026520.1 , HORVU0Hr1G007430.1 , HORVU3Hr1G114820.1
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G180700 expressed protein -
2 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
3 Sobic.010G196000 DNA binding protein, putative, expressed -
4 Sobic.004G301600 integral membrane protein, putative, expressed -
5 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
6 Sobic.007G090469 - -
7 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
8 Sobic.005G215400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
9 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.003G426600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
12 Sobic.007G204700 expressed protein -
13 Sobic.006G050800 expressed protein -
14 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
15 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
17 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
18 Sobic.003G053300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.006G203700 EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic002G105300 Sobic002G105300 Sobic004G180700 Sobic004G180700 Sobic002G105300--Sobic004G180700 Sobic006G202600 Sobic006G202600 Sobic002G105300--Sobic006G202600 Sobic010G196000 Sobic010G196000 Sobic002G105300--Sobic010G196000 Sobic004G301600 Sobic004G301600 Sobic002G105300--Sobic004G301600 Sobic004G295100 Sobic004G295100 Sobic002G105300--Sobic004G295100 Sobic007G090469 Sobic007G090469 Sobic002G105300--Sobic007G090469 Sobic002G213600 Sobic002G213600 Sobic002G105300--Sobic002G213600 Sobic005G215400 Sobic005G215400 Sobic002G105300--Sobic005G215400 Sobic004G348800 Sobic004G348800 Sobic002G105300--Sobic004G348800 Sobic004G180700--Sobic004G301600 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic006G050800 Sobic006G050800 Sobic004G180700--Sobic006G050800 Sobic006G170600 Sobic006G170600 Sobic004G180700--Sobic006G170600 Sobic004G180700--Sobic010G196000 Sobic004G180700--Sobic004G295100 Sobic002G301900 Sobic002G301900 Sobic004G180700--Sobic002G301900 Sobic005G163800 Sobic005G163800 Sobic004G180700--Sobic005G163800 Sobic006G202600--Sobic004G180700 Sobic006G202600--Sobic010G196000 Sobic006G202600--Sobic004G295100 Sobic006G202600--Sobic006G170600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G202600--Sobic006G050800 Sobic001G508532 Sobic001G508532 Sobic006G202600--Sobic001G508532 Sobic006G202600--Sobic007G090469 Sobic010G196000--Sobic004G295100 Sobic010G196000--Sobic006G202600 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic010G196000--Sobic002G105300 Sobic001G330300 Sobic001G330300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic005G067500 Sobic005G067500 Sobic010G196000--Sobic005G067500 Sobic004G301600--Sobic004G180700 Sobic004G301600--Sobic006G170600 Sobic004G301600--Sobic006G202600 Sobic004G301600--Sobic006G050800 Sobic004G301600--Sobic002G301900 Sobic004G301600--Sobic002G105300 Sobic004G301600--Sobic007G090469 Sobic004G301600--Sobic010G196000 Sobic004G301600--Sobic004G295100 Sobic004G295100--Sobic010G196000 Sobic004G297900 Sobic004G297900 Sobic004G295100--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic004G295100--Sobic008G009400 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G295100--Sobic003G311800 Sobic006G235200 Sobic006G235200 Sobic004G295100--Sobic006G235200 Sobic001G300500 Sobic001G300500 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469 Sobic006G172601 Sobic006G172601 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 Sobic007G090469--SobicK026900 Sobic001G238300 Sobic001G238300 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic007G090469--Sobic001G300500 Sobic001G304100 Sobic001G304100 Sobic002G213600--Sobic001G304100 Sobic004G042000 Sobic004G042000 Sobic002G213600--Sobic004G042000 Sobic003G016100 Sobic003G016100 Sobic002G213600--Sobic003G016100 Sobic003G319500 Sobic003G319500 Sobic002G213600--Sobic003G319500 Sobic003G053300 Sobic003G053300 Sobic002G213600--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic002G213600--Sobic002G003800 Sobic004G318700 Sobic004G318700 Sobic002G213600--Sobic004G318700 Sobic010G063000 Sobic010G063000 Sobic002G213600--Sobic010G063000 Sobic001G304201 Sobic001G304201 Sobic002G213600--Sobic001G304201 Sobic005G215400--Sobic004G348800 Sobic007G204700 Sobic007G204700 Sobic005G215400--Sobic007G204700 Sobic010G045500 Sobic010G045500 Sobic005G215400--Sobic010G045500 Sobic001G430100 Sobic001G430100 Sobic005G215400--Sobic001G430100 Sobic010G212500 Sobic010G212500 Sobic005G215400--Sobic010G212500 Sobic005G215400--Sobic002G105300 Sobic003G119500 Sobic003G119500 Sobic005G215400--Sobic003G119500 Sobic007G050200 Sobic007G050200 Sobic005G215400--Sobic007G050200 Sobic004G322800 Sobic004G322800 Sobic005G215400--Sobic004G322800 Sobic001G264000 Sobic001G264000 Sobic004G348800--Sobic001G264000 Sobic004G348800--Sobic005G215400 Sobic004G348800--Sobic010G212500 Sobic004G348800--Sobic001G430100 Sobic004G348800--Sobic002G003800 Sobic006G197100 Sobic006G197100 Sobic004G348800--Sobic006G197100 Sobic009G109000 Sobic009G109000 Sobic004G348800--Sobic009G109000 Sobic004G348800--Sobic003G311800 Sobic004G348800--Sobic007G050200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.