Gene annotation
Transcriptome id Sobic.004G301600.1
Synonym Sb04g033490
Functional annotation integral membrane protein, putative, expressed
UniProt C5XS46
Pfam PF01988
Panther DB PTHR31851 PTHR31851:SF7
NCBI CDD KOG4473; Uncharacterized membrane protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43660 : Vacuolar iron transporter (VIT) family protein
RAP-DB (Rice) LOC_Os02g43030.1 : integral membrane protein, putative, expressed
MaizeGDB (Corn) Zm00025a020953 , Zm00025a056609 , Zm00025a010412
Brachypodium KQJ83808 , KQK00532
Barley HORVU6Hr1G061000.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G180700 expressed protein -
2 Sobic.006G170600 tonoplast intrinsic protein("PubMedID : 26759170,PubMedID : 24597475")@aquaporin protein, putative, expressed K09873: aquaporin TIP
3 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
4 Sobic.006G050800 expressed protein -
5 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.002G105300 SCP-like extracellular protein, expressed -
7 Sobic.007G090469 - -
8 Sobic.010G196000 DNA binding protein, putative, expressed -
9 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
10 Sobic.005G163800 laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
12 Sobic.001G242100 expressed protein -
13 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
15 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
18 Sobic.004G209400 carbonyl reductase 3, putative, expressed -
19 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.003G136200 Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic004G301600 Sobic004G301600 Sobic004G180700 Sobic004G180700 Sobic004G301600--Sobic004G180700 Sobic006G170600 Sobic006G170600 Sobic004G301600--Sobic006G170600 Sobic006G202600 Sobic006G202600 Sobic004G301600--Sobic006G202600 Sobic006G050800 Sobic006G050800 Sobic004G301600--Sobic006G050800 Sobic002G301900 Sobic002G301900 Sobic004G301600--Sobic002G301900 Sobic002G105300 Sobic002G105300 Sobic004G301600--Sobic002G105300 Sobic007G090469 Sobic007G090469 Sobic004G301600--Sobic007G090469 Sobic010G196000 Sobic010G196000 Sobic004G301600--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic004G301600--Sobic004G295100 Sobic004G180700--Sobic004G301600 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic004G180700--Sobic010G196000 Sobic004G180700--Sobic004G295100 Sobic004G180700--Sobic002G301900 Sobic005G163800 Sobic005G163800 Sobic004G180700--Sobic005G163800 Sobic006G150100 Sobic006G150100 Sobic006G170600--Sobic006G150100 Sobic002G003700 Sobic002G003700 Sobic006G170600--Sobic002G003700 Sobic006G170600--Sobic006G202600 Sobic006G170600--Sobic004G301600 Sobic006G170600--Sobic004G180700 Sobic006G225500 Sobic006G225500 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic002G329200 Sobic002G329200 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic006G202600--Sobic004G180700 Sobic006G202600--Sobic010G196000 Sobic006G202600--Sobic004G295100 Sobic006G202600--Sobic006G170600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G202600--Sobic006G050800 Sobic001G508532 Sobic001G508532 Sobic006G202600--Sobic001G508532 Sobic006G202600--Sobic007G090469 Sobic006G050800--Sobic004G180700 Sobic006G050800--Sobic010G196000 Sobic001G330300 Sobic001G330300 Sobic006G050800--Sobic001G330300 Sobic006G050800--Sobic006G202600 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic001G242100 Sobic001G242100 Sobic002G301900--Sobic001G242100 Sobic010G045500 Sobic010G045500 Sobic002G301900--Sobic010G045500 Sobic001G502000 Sobic001G502000 Sobic002G301900--Sobic001G502000 Sobic002G301900--Sobic006G170600 Sobic002G301900--Sobic003G400900 Sobic005G222500 Sobic005G222500 Sobic002G301900--Sobic005G222500 Sobic004G299600 Sobic004G299600 Sobic002G301900--Sobic004G299600 Sobic002G183700 Sobic002G183700 Sobic002G301900--Sobic002G183700 Sobic002G301900--Sobic004G180700 Sobic002G105300--Sobic004G180700 Sobic002G105300--Sobic006G202600 Sobic002G105300--Sobic010G196000 Sobic002G105300--Sobic004G301600 Sobic002G105300--Sobic004G295100 Sobic002G105300--Sobic007G090469 Sobic002G213600 Sobic002G213600 Sobic002G105300--Sobic002G213600 Sobic005G215400 Sobic005G215400 Sobic002G105300--Sobic005G215400 Sobic004G348800 Sobic004G348800 Sobic002G105300--Sobic004G348800 Sobic006G172601 Sobic006G172601 Sobic007G090469--Sobic006G172601 Sobic004G297900 Sobic004G297900 Sobic007G090469--Sobic004G297900 Sobic003G311800 Sobic003G311800 Sobic007G090469--Sobic003G311800 Sobic007G090469--SobicK026900 Sobic001G238300 Sobic001G238300 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic001G300500 Sobic001G300500 Sobic007G090469--Sobic001G300500 Sobic010G196000--Sobic004G295100 Sobic010G196000--Sobic006G202600 Sobic010G196000--Sobic004G180700 Sobic010G196000--Sobic006G050800 Sobic003G426600 Sobic003G426600 Sobic010G196000--Sobic003G426600 Sobic010G196000--Sobic002G105300 Sobic010G196000--Sobic001G330300 Sobic009G188000 Sobic009G188000 Sobic010G196000--Sobic009G188000 Sobic005G067500 Sobic005G067500 Sobic010G196000--Sobic005G067500 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic008G009400 Sobic008G009400 Sobic004G295100--Sobic008G009400 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic004G295100--Sobic003G311800 Sobic006G235200 Sobic006G235200 Sobic004G295100--Sobic006G235200 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469
Octagon: transcription factors


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