Gene annotation
Transcriptome id Sobic.006G170600.1
Synonym TIP2, Sb06g024590, DELTA-TIP2, 2
Functional annotation tonoplast intrinsic protein( (PubMedID : 26759170,(PubMedID : 24597475)
aquaporin protein, putative, expressed
UniProt C5YDH5
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF134
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09873; aquaporin TIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G47450 : tonoplast intrinsic protein 2;3
RAP-DB (Rice) LOC_Os02g44080.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a039037 , Zm00025a010306 , Zm00025a056873 , Zm00025a000620 , Zm00025a020879 , Zm00025a043211 , Zm00025a032208
Brachypodium KQK11808 , KQK00616 , KQJ83938
Barley HORVU6Hr1G062980.1 , HORVU6Hr1G062980.2 , HORVU2Hr1G097780.5 , HORVU2Hr1G097780.4 , HORVU2Hr1G097780.3 , HORVU2Hr1G097780.2 , HORVU2Hr1G097780.1 , HORVU3Hr1G116790.1 , HORVU4Hr1G079230.4 , HORVU3Hr1G116790.3 , HORVU3Hr1G116790.2 , HORVU4Hr1G079230.1 , HORVU3Hr1G116790.4 , HORVU4Hr1G079230.3 , HORVU4Hr1G079230.2 , HORVU3Hr1G116790.9 , HORVU3Hr1G116790.5 , HORVU3Hr1G116790.6 , HORVU0Hr1G032130.2 , HORVU0Hr1G032130.1 , HORVU3Hr1G116790.12
Wheat TraesCS6D02G232100 , TraesCS7A02G331300 , TraesCS7D02G339600 , TraesCS7D02G339600 , TraesCS7D02G339600 , TraesCS2D02G370800 , TraesCS2A02G414100 , TraesCS4A02G410800 , TraesCS4B02G310900 , TraesCS3D02G540900 , TraesCS3A02G535300 , TraesCS6A02G250300 , TraesCS2D02G411400 , TraesCS6B02G275100 , TraesCS3B02G608500 , TraesCS2B02G433200 , TraesCS7B02G243000 , TraesCS7B02G243000 , TraesCS4D02G308800
Populus -


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cDNA sequences
Sobic.006G170600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G150100 Down-regulated by silicon application(PubMedID : 24879770)@Up-regulated by osmotic stress.(PubMedID : 24879770)@aquaporin protein, putative, expressed K09872: aquaporin PIP
2 Sobic.002G003700 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.006G202600 Up-reguralion under heat(PubMedID : 24916767)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
4 Sobic.004G301600 integral membrane protein, putative, expressed -
5 Sobic.004G180700 expressed protein -
6 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
7 Sobic.003G400900 keratin, type I cytoskeletal 9, putative, expressed -
8 Sobic.002G329200 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G237800 expansin precursor, putative, expressed -
10 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
11 Sobic.004G110700 DNA binding protein, putative, expressed -
12 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
13 Sobic.002G412600 RALFL9 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
14 Sobic.003G140700 peroxidase precursor, putative, expressed -
15 Sobic.002G122400 GLTP domain containing protein, putative, expressed -
16 Sobic.005G127400 expressed protein -
17 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G121100 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
20 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic006G170600 Sobic006G170600 Sobic006G150100 Sobic006G150100 Sobic006G170600--Sobic006G150100 Sobic002G003700 Sobic002G003700 Sobic006G170600--Sobic002G003700 Sobic006G202600 Sobic006G202600 Sobic006G170600--Sobic006G202600 Sobic004G301600 Sobic004G301600 Sobic006G170600--Sobic004G301600 Sobic004G180700 Sobic004G180700 Sobic006G170600--Sobic004G180700 Sobic006G225500 Sobic006G225500 Sobic006G170600--Sobic006G225500 Sobic003G400900 Sobic003G400900 Sobic006G170600--Sobic003G400900 Sobic002G329200 Sobic002G329200 Sobic006G170600--Sobic002G329200 Sobic001G237800 Sobic001G237800 Sobic006G170600--Sobic001G237800 Sobic003G349400 Sobic003G349400 Sobic006G150100--Sobic003G349400 Sobic005G127400 Sobic005G127400 Sobic006G150100--Sobic005G127400 Sobic006G150100--Sobic002G003700 Sobic004G110700 Sobic004G110700 Sobic006G150100--Sobic004G110700 Sobic006G150100--Sobic006G170600 Sobic002G068000 Sobic002G068000 Sobic006G150100--Sobic002G068000 Sobic010G234500 Sobic010G234500 Sobic006G150100--Sobic010G234500 Sobic010G158400 Sobic010G158400 Sobic006G150100--Sobic010G158400 Sobic006G150100--Sobic006G225500 Sobic002G003700--Sobic006G150100 Sobic002G003700--Sobic004G110700 Sobic002G003700--Sobic005G127400 Sobic002G003700--Sobic006G170600 Sobic002G003700--Sobic003G349400 Sobic002G122400 Sobic002G122400 Sobic002G003700--Sobic002G122400 Sobic001G229000 Sobic001G229000 Sobic002G003700--Sobic001G229000 Sobic003G132400 Sobic003G132400 Sobic002G003700--Sobic003G132400 Sobic006G028500 Sobic006G028500 Sobic002G003700--Sobic006G028500 Sobic006G202600--Sobic004G180700 Sobic010G196000 Sobic010G196000 Sobic006G202600--Sobic010G196000 Sobic004G295100 Sobic004G295100 Sobic006G202600--Sobic004G295100 Sobic006G202600--Sobic006G170600 Sobic006G202600--Sobic004G301600 SobicK026900 SobicK026900 Sobic006G202600--SobicK026900 Sobic006G050800 Sobic006G050800 Sobic006G202600--Sobic006G050800 Sobic001G508532 Sobic001G508532 Sobic006G202600--Sobic001G508532 Sobic007G090469 Sobic007G090469 Sobic006G202600--Sobic007G090469 Sobic004G301600--Sobic004G180700 Sobic004G301600--Sobic006G170600 Sobic004G301600--Sobic006G202600 Sobic004G301600--Sobic006G050800 Sobic002G301900 Sobic002G301900 Sobic004G301600--Sobic002G301900 Sobic002G105300 Sobic002G105300 Sobic004G301600--Sobic002G105300 Sobic004G301600--Sobic007G090469 Sobic004G301600--Sobic010G196000 Sobic004G301600--Sobic004G295100 Sobic004G180700--Sobic004G301600 Sobic004G180700--Sobic002G105300 Sobic004G180700--Sobic006G202600 Sobic004G180700--Sobic006G050800 Sobic004G180700--Sobic006G170600 Sobic004G180700--Sobic010G196000 Sobic004G180700--Sobic004G295100 Sobic004G180700--Sobic002G301900 Sobic005G163800 Sobic005G163800 Sobic004G180700--Sobic005G163800 Sobic009G186500 Sobic009G186500 Sobic006G225500--Sobic009G186500 Sobic003G140700 Sobic003G140700 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic002G255000 Sobic002G255000 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic003G064800 Sobic003G064800 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600 Sobic010G128400 Sobic010G128400 Sobic003G400900--Sobic010G128400 Sobic001G319300 Sobic001G319300 Sobic003G400900--Sobic001G319300 Sobic001G502000 Sobic001G502000 Sobic003G400900--Sobic001G502000 Sobic003G400900--Sobic001G229000 Sobic001G242100 Sobic001G242100 Sobic003G400900--Sobic001G242100 Sobic005G222500 Sobic005G222500 Sobic003G400900--Sobic005G222500 Sobic004G299600 Sobic004G299600 Sobic003G400900--Sobic004G299600 Sobic007G158800 Sobic007G158800 Sobic003G400900--Sobic007G158800 Sobic007G085500 Sobic007G085500 Sobic003G400900--Sobic007G085500 Sobic001G318300 Sobic001G318300 Sobic002G329200--Sobic001G318300 Sobic002G329200--Sobic003G132400 Sobic002G329200--Sobic006G170600 Sobic002G329200--Sobic006G150100 Sobic003G059000 Sobic003G059000 Sobic002G329200--Sobic003G059000 Sobic002G329200--Sobic002G003700 Sobic002G329200--Sobic003G399600 Sobic002G085900 Sobic002G085900 Sobic002G329200--Sobic002G085900 Sobic002G329200--Sobic006G225500 Sobic009G219200 Sobic009G219200 Sobic001G237800--Sobic009G219200 Sobic010G162800 Sobic010G162800 Sobic001G237800--Sobic010G162800 Sobic001G237800--Sobic003G140700 Sobic001G237800--Sobic002G255000 Sobic001G237800--Sobic005G127400 Sobic001G238000 Sobic001G238000 Sobic001G237800--Sobic001G238000 Sobic001G237800--Sobic003G064800 Sobic001G238200 Sobic001G238200 Sobic001G237800--Sobic001G238200 Sobic009G035900 Sobic009G035900 Sobic001G237800--Sobic009G035900
Octagon: transcription factors


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