Gene annotation
Transcriptome id Sobic.010G083300.1
Synonym Sb10g007226
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
gibberellin receptor GID1L2, putative, expressed
UniProt C5Z6I9
Pfam PF00135
Panther DB PTHR23024 PTHR23024:SF199
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os06g11130.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a049565 , Zm00025a049564 , Zm00025a042666
Brachypodium KQK19010 , KQJ90535 , KQK19014 , KQK19009
Barley HORVU0Hr1G019710.18 , HORVU0Hr1G019710.17 , HORVU0Hr1G019710.4 , HORVU0Hr1G019710.1 , HORVU0Hr1G019710.2 , HORVU0Hr1G019710.3 , HORVU0Hr1G019710.5 , HORVU0Hr1G019710.6 , HORVU0Hr1G019710.7 , HORVU0Hr1G019710.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G075300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.002G185400 transporter-related, putative, expressed -
3 Sobic.005G196700 transporter family protein, putative, expressed -
4 Sobic.007G115600 protein kinase family protein, putative, expressed -
5 Sobic.006G223850 - -
6 Sobic.004G163400 PAN domain-containing protein At5g03700 precursor, putative, expressed -
7 Sobic.007G077600 MBTB20 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
8 Sobic.010G083050 - -
9 Sobic.003G331900 - -
10 Sobic.001G446500 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.004G067800 zinc-binding protein, putative, expressed -
12 Sobic.010G083100 CXE carboxylesterase, putative, expressed -
13 Sobic.001G442600 expressed protein -
14 Sobic.002G237400 expressed protein -
15 Sobic.004G091500 receptor-like protein kinase precursor, putative, expressed -
16 Sobic.002G033100 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.003G265150 - -
18 Sobic.009G127201 - -
19 Sobic.006G097000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
20 Sobic.006G056300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@reticuline oxidase-like protein precursor, putative, expressed -


Gene co-expression network
sample Sobic010G083300 Sobic010G083300 Sobic001G075300 Sobic001G075300 Sobic010G083300--Sobic001G075300 Sobic002G185400 Sobic002G185400 Sobic010G083300--Sobic002G185400 Sobic005G196700 Sobic005G196700 Sobic010G083300--Sobic005G196700 Sobic007G115600 Sobic007G115600 Sobic010G083300--Sobic007G115600 Sobic006G223850 Sobic006G223850 Sobic010G083300--Sobic006G223850 Sobic004G163400 Sobic004G163400 Sobic010G083300--Sobic004G163400 Sobic007G077600 Sobic007G077600 Sobic010G083300--Sobic007G077600 Sobic010G083050 Sobic010G083050 Sobic010G083300--Sobic010G083050 Sobic003G331900 Sobic003G331900 Sobic010G083300--Sobic003G331900 Sobic010G170150 Sobic010G170150 Sobic001G075300--Sobic010G170150 Sobic009G150600 Sobic009G150600 Sobic001G075300--Sobic009G150600 Sobic008G076700 Sobic008G076700 Sobic001G075300--Sobic008G076700 Sobic001G428600 Sobic001G428600 Sobic001G075300--Sobic001G428600 Sobic007G108700 Sobic007G108700 Sobic001G075300--Sobic007G108700 Sobic010G082100 Sobic010G082100 Sobic001G075300--Sobic010G082100 Sobic001G075300--Sobic010G083300 Sobic001G075300--Sobic002G185400 Sobic004G212600 Sobic004G212600 Sobic001G075300--Sobic004G212600 Sobic001G084200 Sobic001G084200 Sobic002G185400--Sobic001G084200 Sobic001G001132 Sobic001G001132 Sobic002G185400--Sobic001G001132 Sobic009G168700 Sobic009G168700 Sobic002G185400--Sobic009G168700 Sobic006G138966 Sobic006G138966 Sobic002G185400--Sobic006G138966 Sobic005G073101 Sobic005G073101 Sobic002G185400--Sobic005G073101 Sobic001G192750 Sobic001G192750 Sobic002G185400--Sobic001G192750 Sobic004G067850 Sobic004G067850 Sobic002G185400--Sobic004G067850 Sobic008G032850 Sobic008G032850 Sobic002G185400--Sobic008G032850 Sobic002G342200 Sobic002G342200 Sobic002G185400--Sobic002G342200 Sobic005G196700--Sobic002G185400 Sobic005G196700--Sobic010G083300 Sobic001G420600 Sobic001G420600 Sobic005G196700--Sobic001G420600 Sobic005G196700--Sobic001G075300 Sobic005G196700--Sobic001G084200 Sobic001G449200 Sobic001G449200 Sobic005G196700--Sobic001G449200 Sobic005G196700--Sobic009G168700 Sobic007G053000 Sobic007G053000 Sobic005G196700--Sobic007G053000 Sobic004G352800 Sobic004G352800 Sobic005G196700--Sobic004G352800 Sobic001G403900 Sobic001G403900 Sobic007G115600--Sobic001G403900 Sobic008G154500 Sobic008G154500 Sobic007G115600--Sobic008G154500 Sobic006G281300 Sobic006G281300 Sobic007G115600--Sobic006G281300 Sobic007G115600--Sobic006G223850 Sobic010G083100 Sobic010G083100 Sobic007G115600--Sobic010G083100 Sobic006G107332 Sobic006G107332 Sobic007G115600--Sobic006G107332 Sobic010G129900 Sobic010G129900 Sobic007G115600--Sobic010G129900 Sobic007G176300 Sobic007G176300 Sobic007G115600--Sobic007G176300 Sobic002G221000 Sobic002G221000 Sobic007G115600--Sobic002G221000 Sobic002G237400 Sobic002G237400 Sobic006G223850--Sobic002G237400 Sobic006G223850--Sobic010G129900 Sobic006G223850--Sobic001G403900 Sobic004G055400 Sobic004G055400 Sobic006G223850--Sobic004G055400 Sobic007G069750 Sobic007G069750 Sobic006G223850--Sobic007G069750 Sobic001G005100 Sobic001G005100 Sobic006G223850--Sobic001G005100 Sobic001G112300 Sobic001G112300 Sobic006G223850--Sobic001G112300 Sobic006G222200 Sobic006G222200 Sobic006G223850--Sobic006G222200 Sobic001G221750 Sobic001G221750 Sobic006G223850--Sobic001G221750 Sobic004G163400--Sobic010G083300 Sobic003G212300 Sobic003G212300 Sobic004G163400--Sobic003G212300 Sobic002G196900 Sobic002G196900 Sobic004G163400--Sobic002G196900 Sobic001G251300 Sobic001G251300 Sobic004G163400--Sobic001G251300 Sobic001G388900 Sobic001G388900 Sobic004G163400--Sobic001G388900 Sobic001G094800 Sobic001G094800 Sobic004G163400--Sobic001G094800 Sobic008G165800 Sobic008G165800 Sobic004G163400--Sobic008G165800 Sobic002G266400 Sobic002G266400 Sobic004G163400--Sobic002G266400 Sobic003G390500 Sobic003G390500 Sobic004G163400--Sobic003G390500 Sobic006G056300 Sobic006G056300 Sobic007G077600--Sobic006G056300 Sobic001G309666 Sobic001G309666 Sobic007G077600--Sobic001G309666 Sobic007G077600--Sobic010G083300 Sobic005G186200 Sobic005G186200 Sobic007G077600--Sobic005G186200 Sobic005G207300 Sobic005G207300 Sobic007G077600--Sobic005G207300 Sobic008G161900 Sobic008G161900 Sobic007G077600--Sobic008G161900 Sobic009G149000 Sobic009G149000 Sobic007G077600--Sobic009G149000 Sobic005G183700 Sobic005G183700 Sobic007G077600--Sobic005G183700 Sobic002G172300 Sobic002G172300 Sobic007G077600--Sobic002G172300 Sobic007G175000 Sobic007G175000 Sobic010G083050--Sobic007G175000 Sobic006G027800 Sobic006G027800 Sobic010G083050--Sobic006G027800 Sobic004G221100 Sobic004G221100 Sobic010G083050--Sobic004G221100 Sobic003G399200 Sobic003G399200 Sobic010G083050--Sobic003G399200 Sobic009G218450 Sobic009G218450 Sobic010G083050--Sobic009G218450 Sobic007G149950 Sobic007G149950 Sobic010G083050--Sobic007G149950 Sobic003G177350 Sobic003G177350 Sobic010G083050--Sobic003G177350 Sobic003G210500 Sobic003G210500 Sobic010G083050--Sobic003G210500 Sobic007G155950 Sobic007G155950 Sobic010G083050--Sobic007G155950 Sobic003G331900--Sobic010G083300 Sobic005G159400 Sobic005G159400 Sobic003G331900--Sobic005G159400 Sobic010G019600 Sobic010G019600 Sobic003G331900--Sobic010G019600 Sobic004G045000 Sobic004G045000 Sobic003G331900--Sobic004G045000 Sobic005G015600 Sobic005G015600 Sobic003G331900--Sobic005G015600 Sobic003G186132 Sobic003G186132 Sobic003G331900--Sobic003G186132 Sobic003G391800 Sobic003G391800 Sobic003G331900--Sobic003G391800 Sobic010G000401 Sobic010G000401 Sobic003G331900--Sobic010G000401 Sobic004G176100 Sobic004G176100 Sobic003G331900--Sobic004G176100
Octagon: transcription factors


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