Gene annotation
Transcriptome id Sobic.004G163400.1
Synonym Sb04g021510
Functional annotation PAN domain-containing protein At5g03700 precursor, putative, expressed
UniProt A0A194YQ60
Pfam PF00024 PF00954 PF01453
Panther DB PTHR11795 PTHR11795:SF386
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G03700 : D-mannose binding lectin protein with Apple-like carbohydrate-binding domain
RAP-DB (Rice) LOC_Os02g32620.1 : PAN domain-containing protein At5g03700 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a020523
Brachypodium KQJ99699
Barley HORVU7Hr1G095930.2 , HORVU7Hr1G095930.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G083300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
2 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
3 Sobic.002G196900 expressed protein -
4 Sobic.001G251300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
5 Sobic.001G388900 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase
6 Sobic.001G094800 similar to IAA1 protein(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
7 Sobic.008G165800 Protein kinase domain containing protein, expressed -
8 Sobic.002G266400 - -
9 Sobic.003G390500 POEI32 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
10 Sobic.007G108700 expressed protein -
11 Sobic.001G514900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AMP-binding domain containing protein, expressed -
12 Sobic.006G168900 expressed protein -
13 Sobic.004G348500 RING-H2 finger protein ATL5G, putative, expressed -
14 Sobic.005G096600 protein kinase domain containing protein, expressed -
15 Sobic.006G134001 - -
16 Sobic.010G131950 - -
17 Sobic.008G137300 RALFL43 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
18 Sobic.006G097000 aspartic proteinase nepenthesin-2 precursor, putative, expressed -
19 Sobic.003G364500 receptor-like protein kinase, putative, expressed -
20 Sobic.001G428600 nodulation-signaling pathway 2 protein, putative, expressed -


Gene co-expression network
sample Sobic004G163400 Sobic004G163400 Sobic010G083300 Sobic010G083300 Sobic004G163400--Sobic010G083300 Sobic003G212300 Sobic003G212300 Sobic004G163400--Sobic003G212300 Sobic002G196900 Sobic002G196900 Sobic004G163400--Sobic002G196900 Sobic001G251300 Sobic001G251300 Sobic004G163400--Sobic001G251300 Sobic001G388900 Sobic001G388900 Sobic004G163400--Sobic001G388900 Sobic001G094800 Sobic001G094800 Sobic004G163400--Sobic001G094800 Sobic008G165800 Sobic008G165800 Sobic004G163400--Sobic008G165800 Sobic002G266400 Sobic002G266400 Sobic004G163400--Sobic002G266400 Sobic003G390500 Sobic003G390500 Sobic004G163400--Sobic003G390500 Sobic001G075300 Sobic001G075300 Sobic010G083300--Sobic001G075300 Sobic002G185400 Sobic002G185400 Sobic010G083300--Sobic002G185400 Sobic005G196700 Sobic005G196700 Sobic010G083300--Sobic005G196700 Sobic007G115600 Sobic007G115600 Sobic010G083300--Sobic007G115600 Sobic006G223850 Sobic006G223850 Sobic010G083300--Sobic006G223850 Sobic010G083300--Sobic004G163400 Sobic007G077600 Sobic007G077600 Sobic010G083300--Sobic007G077600 Sobic010G083050 Sobic010G083050 Sobic010G083300--Sobic010G083050 Sobic003G331900 Sobic003G331900 Sobic010G083300--Sobic003G331900 Sobic007G108700 Sobic007G108700 Sobic003G212300--Sobic007G108700 Sobic004G046400 Sobic004G046400 Sobic003G212300--Sobic004G046400 Sobic005G096600 Sobic005G096600 Sobic003G212300--Sobic005G096600 Sobic003G024900 Sobic003G024900 Sobic003G212300--Sobic003G024900 Sobic002G356500 Sobic002G356500 Sobic003G212300--Sobic002G356500 Sobic003G212300--Sobic004G163400 Sobic001G021900 Sobic001G021900 Sobic003G212300--Sobic001G021900 Sobic002G235500 Sobic002G235500 Sobic003G212300--Sobic002G235500 Sobic002G042100 Sobic002G042100 Sobic003G212300--Sobic002G042100 Sobic002G196900--Sobic008G165800 Sobic005G031100 Sobic005G031100 Sobic002G196900--Sobic005G031100 Sobic002G387400 Sobic002G387400 Sobic002G196900--Sobic002G387400 Sobic004G044500 Sobic004G044500 Sobic002G196900--Sobic004G044500 Sobic007G213500 Sobic007G213500 Sobic002G196900--Sobic007G213500 Sobic002G197400 Sobic002G197400 Sobic002G196900--Sobic002G197400 Sobic001G104100 Sobic001G104100 Sobic002G196900--Sobic001G104100 Sobic009G199900 Sobic009G199900 Sobic002G196900--Sobic009G199900 Sobic006G121200 Sobic006G121200 Sobic002G196900--Sobic006G121200 Sobic001G251300--Sobic001G388900 Sobic009G064100 Sobic009G064100 Sobic001G251300--Sobic009G064100 Sobic010G158200 Sobic010G158200 Sobic001G251300--Sobic010G158200 Sobic010G256500 Sobic010G256500 Sobic001G251300--Sobic010G256500 Sobic005G016600 Sobic005G016600 Sobic001G251300--Sobic005G016600 Sobic002G326000 Sobic002G326000 Sobic001G251300--Sobic002G326000 Sobic002G253000 Sobic002G253000 Sobic001G251300--Sobic002G253000 Sobic002G314700 Sobic002G314700 Sobic001G251300--Sobic002G314700 Sobic005G139075 Sobic005G139075 Sobic001G251300--Sobic005G139075 Sobic003G213600 Sobic003G213600 Sobic001G388900--Sobic003G213600 Sobic001G388900--Sobic001G251300 Sobic003G337100 Sobic003G337100 Sobic001G388900--Sobic003G337100 Sobic001G388900--Sobic002G326000 Sobic001G388900--Sobic010G158200 Sobic001G388900--Sobic009G064100 Sobic007G223900 Sobic007G223900 Sobic001G388900--Sobic007G223900 Sobic006G075801 Sobic006G075801 Sobic001G388900--Sobic006G075801 Sobic003G283500 Sobic003G283500 Sobic001G388900--Sobic003G283500 Sobic008G137300 Sobic008G137300 Sobic001G094800--Sobic008G137300 Sobic002G218800 Sobic002G218800 Sobic001G094800--Sobic002G218800 Sobic004G348500 Sobic004G348500 Sobic001G094800--Sobic004G348500 Sobic001G094800--Sobic003G390500 Sobic001G094800--Sobic002G356500 Sobic001G094800--Sobic004G046400 Sobic001G094800--Sobic003G212300 Sobic004G089100 Sobic004G089100 Sobic001G094800--Sobic004G089100 Sobic003G121100 Sobic003G121100 Sobic001G094800--Sobic003G121100 Sobic008G165800--Sobic002G196900 Sobic010G131950 Sobic010G131950 Sobic008G165800--Sobic010G131950 Sobic008G165800--Sobic005G031100 Sobic002G336500 Sobic002G336500 Sobic008G165800--Sobic002G336500 Sobic009G109700 Sobic009G109700 Sobic008G165800--Sobic009G109700 Sobic009G035100 Sobic009G035100 Sobic008G165800--Sobic009G035100 Sobic007G219000 Sobic007G219000 Sobic008G165800--Sobic007G219000 Sobic003G040300 Sobic003G040300 Sobic008G165800--Sobic003G040300 Sobic009G208000 Sobic009G208000 Sobic008G165800--Sobic009G208000 Sobic002G012400 Sobic002G012400 Sobic002G266400--Sobic002G012400 Sobic002G348500 Sobic002G348500 Sobic002G266400--Sobic002G348500 Sobic005G186200 Sobic005G186200 Sobic002G266400--Sobic005G186200 Sobic004G332500 Sobic004G332500 Sobic002G266400--Sobic004G332500 Sobic003G414800 Sobic003G414800 Sobic002G266400--Sobic003G414800 Sobic003G414900 Sobic003G414900 Sobic002G266400--Sobic003G414900 Sobic006G097000 Sobic006G097000 Sobic002G266400--Sobic006G097000 Sobic003G364500 Sobic003G364500 Sobic002G266400--Sobic003G364500 Sobic001G100600 Sobic001G100600 Sobic002G266400--Sobic001G100600 Sobic001G507100 Sobic001G507100 Sobic003G390500--Sobic001G507100 Sobic009G160800 Sobic009G160800 Sobic003G390500--Sobic009G160800 Sobic009G181600 Sobic009G181600 Sobic003G390500--Sobic009G181600 Sobic006G106900 Sobic006G106900 Sobic003G390500--Sobic006G106900 Sobic001G438200 Sobic001G438200 Sobic003G390500--Sobic001G438200 Sobic004G306900 Sobic004G306900 Sobic003G390500--Sobic004G306900 Sobic006G273300 Sobic006G273300 Sobic003G390500--Sobic006G273300 Sobic005G202300 Sobic005G202300 Sobic003G390500--Sobic005G202300 Sobic003G064800 Sobic003G064800 Sobic003G390500--Sobic003G064800
Octagon: transcription factors


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