Gene annotation
Transcriptome id Sobic.003G212300.1
Synonym Sb03g027200, BCS1
Functional annotation mitochondrial chaperone BCS1, putative, expressed
UniProt C5XQB0
Pfam PF00004 PF14363
Panther DB PTHR23070 PTHR23070:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G50930 : cytochrome BC1 synthesis
RAP-DB (Rice) LOC_Os01g42030.1 : mitochondrial chaperone BCS1, putative, expressed
MaizeGDB (Corn) Zm00025a004879 , Zm00025a028637
Brachypodium KQK15975 , PNT76143 , KQK04606 , KQJ90344 , KQK08635
Barley HORVU1Hr1G093760.10 , HORVU1Hr1G093760.11 , HORVU1Hr1G093760.12 , HORVU1Hr1G093760.13 , HORVU1Hr1G093710.1 , HORVU1Hr1G093760.8 , HORVU1Hr1G093760.9 , HORVU1Hr1G093760.2 , HORVU1Hr1G093760.1 , HORVU1Hr1G093760.6 , HORVU1Hr1G093600.5 , HORVU1Hr1G093600.4 , HORVU1Hr1G093600.1 , HORVU1Hr1G093600.3 , HORVU1Hr1G093600.2 , HORVU2Hr1G046180.3 , HORVU2Hr1G046180.2 , HORVU2Hr1G046180.1 , HORVU2Hr1G046180.4 , HORVU3Hr1G052880.6 , HORVU3Hr1G052880.7 , HORVU3Hr1G052880.4 , HORVU3Hr1G052880.2 , HORVU3Hr1G052880.3 , HORVU3Hr1G052880.1
Wheat TraesCS3A02G215000 , TraesCS1D02G439400 , TraesCS1A02G430000 , TraesCS1B02G464900 , TraesCS3B02G246300 , TraesCS1D02G439500 , TraesCS1B02G465000 , TraesCS1A02G430200 , TraesCS1A02G429800 , TraesCS1A02G429300 , TraesCS3D02G218100 , TraesCS1D02G438800 , TraesCS1D02G439300 , TraesCS1B02G464100 , TraesCS1A02G430100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G108700 expressed protein -
2 Sobic.004G046400 rhodanese-like domain containing protein, putative, expressed -
3 Sobic.005G096600 protein kinase domain containing protein, expressed -
4 Sobic.003G024900 carnitine racemase like protein, putative, expressed -
5 Sobic.002G356500 expressed protein -
6 Sobic.004G163400 PAN domain-containing protein At5g03700 precursor, putative, expressed -
7 Sobic.001G021900 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
8 Sobic.002G235500 bZIP transcription factor domain containing protein, expressed -
9 Sobic.002G042100 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.010G192700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
11 Sobic.003G134100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@eukaryotic translation initiation factor 6, putative, expressed K03264: translation initiation factor 6
12 Sobic.002G168400 RGH2B, putative, expressed -
13 Sobic.004G034100 NIN-like protein 2, putative, expressed -
14 Sobic.002G266400 - -
15 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
16 Sobic.003G414800 DUF567 domain containing protein, putative, expressed -
17 Sobic.010G131950 - -
18 Sobic.001G094800 similar to IAA1 protein(PubMedID : 29862293)@"domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA13 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
19 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
20 Sobic.002G373900 lung seven transmembrane domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G212300 Sobic003G212300 Sobic007G108700 Sobic007G108700 Sobic003G212300--Sobic007G108700 Sobic004G046400 Sobic004G046400 Sobic003G212300--Sobic004G046400 Sobic005G096600 Sobic005G096600 Sobic003G212300--Sobic005G096600 Sobic003G024900 Sobic003G024900 Sobic003G212300--Sobic003G024900 Sobic002G356500 Sobic002G356500 Sobic003G212300--Sobic002G356500 Sobic004G163400 Sobic004G163400 Sobic003G212300--Sobic004G163400 Sobic001G021900 Sobic001G021900 Sobic003G212300--Sobic001G021900 Sobic002G235500 Sobic002G235500 Sobic003G212300--Sobic002G235500 Sobic002G042100 Sobic002G042100 Sobic003G212300--Sobic002G042100 Sobic004G011100 Sobic004G011100 Sobic007G108700--Sobic004G011100 Sobic003G139300 Sobic003G139300 Sobic007G108700--Sobic003G139300 Sobic003G368600 Sobic003G368600 Sobic007G108700--Sobic003G368600 Sobic007G108700--Sobic001G021900 Sobic007G108700--Sobic002G356500 Sobic001G075300 Sobic001G075300 Sobic007G108700--Sobic001G075300 Sobic007G108700--Sobic002G235500 Sobic010G204200 Sobic010G204200 Sobic007G108700--Sobic010G204200 Sobic007G108700--Sobic003G024900 Sobic002G379700 Sobic002G379700 Sobic004G046400--Sobic002G379700 Sobic003G249500 Sobic003G249500 Sobic004G046400--Sobic003G249500 Sobic002G168400 Sobic002G168400 Sobic004G046400--Sobic002G168400 Sobic004G046400--Sobic002G356500 Sobic009G183800 Sobic009G183800 Sobic004G046400--Sobic009G183800 Sobic004G046400--Sobic003G212300 Sobic004G106500 Sobic004G106500 Sobic004G046400--Sobic004G106500 Sobic008G019900 Sobic008G019900 Sobic004G046400--Sobic008G019900 Sobic004G037100 Sobic004G037100 Sobic004G046400--Sobic004G037100 Sobic010G131950 Sobic010G131950 Sobic005G096600--Sobic010G131950 Sobic006G021100 Sobic006G021100 Sobic005G096600--Sobic006G021100 Sobic001G191500 Sobic001G191500 Sobic005G096600--Sobic001G191500 Sobic001G098000 Sobic001G098000 Sobic005G096600--Sobic001G098000 Sobic009G035100 Sobic009G035100 Sobic005G096600--Sobic009G035100 Sobic002G226200 Sobic002G226200 Sobic005G096600--Sobic002G226200 Sobic008G190600 Sobic008G190600 Sobic005G096600--Sobic008G190600 Sobic005G096600--Sobic003G212300 Sobic004G118000 Sobic004G118000 Sobic005G096600--Sobic004G118000 Sobic002G311300 Sobic002G311300 Sobic003G024900--Sobic002G311300 Sobic003G024900--Sobic002G235500 Sobic003G024900--Sobic007G108700 Sobic002G348500 Sobic002G348500 Sobic003G024900--Sobic002G348500 Sobic004G287000 Sobic004G287000 Sobic003G024900--Sobic004G287000 Sobic003G024900--Sobic003G212300 Sobic001G108800 Sobic001G108800 Sobic003G024900--Sobic001G108800 Sobic005G013600 Sobic005G013600 Sobic003G024900--Sobic005G013600 Sobic003G024900--Sobic001G021900 Sobic002G356500--Sobic009G183800 Sobic002G356500--Sobic007G108700 Sobic005G228400 Sobic005G228400 Sobic002G356500--Sobic005G228400 Sobic002G356500--Sobic008G019900 Sobic002G281100 Sobic002G281100 Sobic002G356500--Sobic002G281100 Sobic001G062500 Sobic001G062500 Sobic002G356500--Sobic001G062500 Sobic002G218800 Sobic002G218800 Sobic002G356500--Sobic002G218800 Sobic002G356500--Sobic004G046400 Sobic009G035900 Sobic009G035900 Sobic002G356500--Sobic009G035900 Sobic010G083300 Sobic010G083300 Sobic004G163400--Sobic010G083300 Sobic004G163400--Sobic003G212300 Sobic002G196900 Sobic002G196900 Sobic004G163400--Sobic002G196900 Sobic001G251300 Sobic001G251300 Sobic004G163400--Sobic001G251300 Sobic001G388900 Sobic001G388900 Sobic004G163400--Sobic001G388900 Sobic001G094800 Sobic001G094800 Sobic004G163400--Sobic001G094800 Sobic008G165800 Sobic008G165800 Sobic004G163400--Sobic008G165800 Sobic002G266400 Sobic002G266400 Sobic004G163400--Sobic002G266400 Sobic003G390500 Sobic003G390500 Sobic004G163400--Sobic003G390500 Sobic001G021900--Sobic002G235500 Sobic003G117600 Sobic003G117600 Sobic001G021900--Sobic003G117600 Sobic001G021900--Sobic003G139300 Sobic001G325400 Sobic001G325400 Sobic001G021900--Sobic001G325400 Sobic009G035200 Sobic009G035200 Sobic001G021900--Sobic009G035200 Sobic010G185000 Sobic010G185000 Sobic001G021900--Sobic010G185000 Sobic001G119000 Sobic001G119000 Sobic001G021900--Sobic001G119000 Sobic001G082600 Sobic001G082600 Sobic001G021900--Sobic001G082600 Sobic006G092500 Sobic006G092500 Sobic001G021900--Sobic006G092500 Sobic010G239300 Sobic010G239300 Sobic002G235500--Sobic010G239300 Sobic001G317200 Sobic001G317200 Sobic002G235500--Sobic001G317200 Sobic002G415100 Sobic002G415100 Sobic002G235500--Sobic002G415100 Sobic006G099900 Sobic006G099900 Sobic002G235500--Sobic006G099900 Sobic009G164600 Sobic009G164600 Sobic002G235500--Sobic009G164600 Sobic002G235500--Sobic001G021900 Sobic001G325000 Sobic001G325000 Sobic002G235500--Sobic001G325000 Sobic003G252800 Sobic003G252800 Sobic002G235500--Sobic003G252800 Sobic007G141500 Sobic007G141500 Sobic002G235500--Sobic007G141500 Sobic001G231400 Sobic001G231400 Sobic002G042100--Sobic001G231400 Sobic002G192000 Sobic002G192000 Sobic002G042100--Sobic002G192000 Sobic001G481100 Sobic001G481100 Sobic002G042100--Sobic001G481100 Sobic004G243100 Sobic004G243100 Sobic002G042100--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic002G042100--Sobic001G018300 Sobic001G367600 Sobic001G367600 Sobic002G042100--Sobic001G367600 Sobic002G251000 Sobic002G251000 Sobic002G042100--Sobic002G251000 Sobic001G079300 Sobic001G079300 Sobic002G042100--Sobic001G079300 Sobic006G075400 Sobic006G075400 Sobic002G042100--Sobic006G075400
Octagon: transcription factors


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