Gene annotation
Transcriptome id Sobic.003G134100.1
Synonym Sb03g011410, emb1624
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
eukaryotic translation initiation factor 6, putative, expressed
UniProt C5XHC8
Pfam PF01912
Panther DB PTHR10784 PTHR10784:SF1
NCBI CDD KOG3185; Translation initiation factor 6 (eIF-6)
KEGG Orthology K03264; translation initiation factor 6
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G55620 : Translation initiation factor IF6
RAP-DB (Rice) LOC_Os01g17330.1 : eukaryotic translation initiation factor 6, putative, expressed
MaizeGDB (Corn) Zm00025a035186
Brachypodium KQK03955
Barley HORVU3Hr1G040980.1
Wheat TraesCS3A02G191100 , TraesCS3B02G220700 , TraesCS3B02G220700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G207301 - -
2 Sobic.006G205800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
3 Sobic.010G192700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
4 Sobic.009G027200 tetraspanin family protein, putative, expressed -
5 Sobic.010G132100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thioredoxin domain-containing protein 17, putative, expressed -
6 Sobic.003G226600 WRKY12, expressed -
7 Sobic.006G217400 expressed protein -
8 Sobic.002G145600 expressed protein -
9 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.002G153600 expressed protein -
11 Sobic.003G348900 disease resistance-responsive family protein, putative, expressed -
12 Sobic.006G094800 - -
13 Sobic.003G212300 mitochondrial chaperone BCS1, putative, expressed -
14 Sobic.004G191901 - K09264: MADS-box transcription factor, plant
15 Sobic.003G024900 carnitine racemase like protein, putative, expressed -
16 Sobic.008G040800 OsFBX396 - F-box domain containing protein, expressed -
17 Sobic.010G224100 expressed protein -
18 Sobic.010G229300 expressed protein -
19 Sobic.009G016666 - -
20 Sobic.008G191200 ATPase 3, putative, expressed -


Gene co-expression network
sample Sobic003G134100 Sobic003G134100 Sobic001G207301 Sobic001G207301 Sobic003G134100--Sobic001G207301 Sobic006G205800 Sobic006G205800 Sobic003G134100--Sobic006G205800 Sobic010G192700 Sobic010G192700 Sobic003G134100--Sobic010G192700 Sobic009G027200 Sobic009G027200 Sobic003G134100--Sobic009G027200 Sobic010G132100 Sobic010G132100 Sobic003G134100--Sobic010G132100 Sobic003G226600 Sobic003G226600 Sobic003G134100--Sobic003G226600 Sobic006G217400 Sobic006G217400 Sobic003G134100--Sobic006G217400 Sobic002G145600 Sobic002G145600 Sobic003G134100--Sobic002G145600 Sobic003G314200 Sobic003G314200 Sobic003G134100--Sobic003G314200 Sobic003G169700 Sobic003G169700 Sobic001G207301--Sobic003G169700 SobicK031400 SobicK031400 Sobic001G207301--SobicK031400 Sobic001G207301--Sobic006G217400 Sobic004G332200 Sobic004G332200 Sobic001G207301--Sobic004G332200 Sobic001G207301--Sobic006G205800 Sobic006G261650 Sobic006G261650 Sobic001G207301--Sobic006G261650 Sobic003G163000 Sobic003G163000 Sobic001G207301--Sobic003G163000 Sobic001G420150 Sobic001G420150 Sobic001G207301--Sobic001G420150 Sobic004G291300 Sobic004G291300 Sobic001G207301--Sobic004G291300 Sobic006G205800--Sobic001G207301 Sobic006G112000 Sobic006G112000 Sobic006G205800--Sobic006G112000 Sobic006G205800--Sobic003G314200 Sobic003G348900 Sobic003G348900 Sobic006G205800--Sobic003G348900 Sobic001G097800 Sobic001G097800 Sobic006G205800--Sobic001G097800 Sobic006G094800 Sobic006G094800 Sobic006G205800--Sobic006G094800 Sobic008G040800 Sobic008G040800 Sobic006G205800--Sobic008G040800 Sobic007G159300 Sobic007G159300 Sobic006G205800--Sobic007G159300 Sobic002G215866 Sobic002G215866 Sobic006G205800--Sobic002G215866 Sobic010G229300 Sobic010G229300 Sobic010G192700--Sobic010G229300 Sobic003G186066 Sobic003G186066 Sobic010G192700--Sobic003G186066 Sobic003G120900 Sobic003G120900 Sobic010G192700--Sobic003G120900 Sobic002G153600 Sobic002G153600 Sobic010G192700--Sobic002G153600 Sobic010G192700--Sobic003G348900 Sobic006G232100 Sobic006G232100 Sobic010G192700--Sobic006G232100 Sobic010G192700--Sobic006G112000 Sobic003G008200 Sobic003G008200 Sobic010G192700--Sobic003G008200 Sobic010G192700--Sobic001G097800 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201 Sobic010G132100--Sobic009G027200 Sobic002G112200 Sobic002G112200 Sobic010G132100--Sobic002G112200 Sobic004G223700 Sobic004G223700 Sobic010G132100--Sobic004G223700 Sobic001G050650 Sobic001G050650 Sobic010G132100--Sobic001G050650 Sobic007G098050 Sobic007G098050 Sobic010G132100--Sobic007G098050 Sobic001G449300 Sobic001G449300 Sobic010G132100--Sobic001G449300 Sobic010G098800 Sobic010G098800 Sobic010G132100--Sobic010G098800 Sobic004G206000 Sobic004G206000 Sobic010G132100--Sobic004G206000 Sobic010G132100--SobicK031400 Sobic001G450900 Sobic001G450900 Sobic003G226600--Sobic001G450900 Sobic005G021400 Sobic005G021400 Sobic003G226600--Sobic005G021400 Sobic003G226600--Sobic001G207301 Sobic005G104900 Sobic005G104900 Sobic003G226600--Sobic005G104900 Sobic003G226600--Sobic006G217400 Sobic001G535850 Sobic001G535850 Sobic003G226600--Sobic001G535850 Sobic002G401533 Sobic002G401533 Sobic003G226600--Sobic002G401533 Sobic003G226600--Sobic009G027200 Sobic003G161900 Sobic003G161900 Sobic003G226600--Sobic003G161900 Sobic003G172966 Sobic003G172966 Sobic006G217400--Sobic003G172966 Sobic006G217400--Sobic007G200700 Sobic006G217400--Sobic004G115100 SobicK032200 SobicK032200 Sobic006G217400--SobicK032200 Sobic006G107700 Sobic006G107700 Sobic006G217400--Sobic006G107700 Sobic003G056200 Sobic003G056200 Sobic006G217400--Sobic003G056200 SobicK031900 SobicK031900 Sobic006G217400--SobicK031900 Sobic001G261444 Sobic001G261444 Sobic006G217400--Sobic001G261444 Sobic006G217400--Sobic008G100201 Sobic004G313750 Sobic004G313750 Sobic002G145600--Sobic004G313750 Sobic002G145600--Sobic010G132100 Sobic010G124133 Sobic010G124133 Sobic002G145600--Sobic010G124133 Sobic001G377400 Sobic001G377400 Sobic002G145600--Sobic001G377400 Sobic004G259800 Sobic004G259800 Sobic002G145600--Sobic004G259800 Sobic003G034350 Sobic003G034350 Sobic002G145600--Sobic003G034350 Sobic004G248000 Sobic004G248000 Sobic002G145600--Sobic004G248000 Sobic010G252800 Sobic010G252800 Sobic002G145600--Sobic010G252800 Sobic007G177901 Sobic007G177901 Sobic002G145600--Sobic007G177901 Sobic003G314200--Sobic008G040800 Sobic003G314200--Sobic006G205800 Sobic003G314200--Sobic006G094800 Sobic001G148000 Sobic001G148000 Sobic003G314200--Sobic001G148000 Sobic003G314200--Sobic003G226600 Sobic003G314200--Sobic009G027200 Sobic003G314200--Sobic001G207301 Sobic001G501701 Sobic001G501701 Sobic003G314200--Sobic001G501701 Sobic004G338200 Sobic004G338200 Sobic003G314200--Sobic004G338200
Octagon: transcription factors


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