Gene annotation
Transcriptome id Sobic.002G153600.4,Sobic.002G153600.5,Sobic.002G153600.3,Sobic.002G153600.6
Synonym Sb02g018900
Functional annotation expressed protein
UniProt A0A1W0W419 , A0A1W0W491
Pfam -
Panther DB PTHR33984 PTHR33984:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12070 : -
RAP-DB (Rice) LOC_Os09g10950.1 : expressed protein
MaizeGDB (Corn) Zm00025a013649
Brachypodium KQK01035
Barley HORVU6Hr1G070610.10 , HORVU6Hr1G070610.11 , HORVU6Hr1G070610.12 , HORVU6Hr1G070610.13 , HORVU6Hr1G070610.14 , HORVU5Hr1G053390.3 , HORVU5Hr1G053390.2 , HORVU5Hr1G053390.1 , HORVU5Hr1G053390.6 , HORVU5Hr1G053390.5 , HORVU5Hr1G053390.4 , HORVU6Hr1G070610.2 , HORVU6Hr1G070610.3 , HORVU6Hr1G070610.6 , HORVU6Hr1G070610.7 , HORVU6Hr1G070610.4 , HORVU6Hr1G070610.5 , HORVU6Hr1G070610.8 , HORVU6Hr1G070610.9
Wheat TraesCS6B02G309900 , TraesCS6D02G261400 , TraesCS6A02G281100 , TraesCS5A02G175700 , TraesCS5D02G179400 , TraesCS5B02G172300 , TraesCS5B02G172300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G232100 expressed protein -
2 Sobic.003G142800 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
3 Sobic.006G217400 expressed protein -
4 Sobic.004G130500 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.006G035350 - K02986: RP-S4, small subunit ribosomal protein S4
6 Sobic.004G127733 - -
7 Sobic.K031400 ATP synthase protein YMF19, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
8 Sobic.004G260250 - -
9 Sobic.010G132400 Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
10 Sobic.K031900 - -
11 Sobic.001G423200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
12 Sobic.003G268100 - -
13 Sobic.007G103200 - -
14 Sobic.004G115100 DNA-directed RNA polymerase subunit beta, putative, expressed K03043: DNA-directed RNA polymerase subunit beta
15 Sobic.010G143700 - -
16 Sobic.010G247750 - -
17 Sobic.007G127200 ECT protein, putative, expressed K07877: Ras-related protein Rab-2A
18 Sobic.001G420150 - -
19 Sobic.008G100201 - -
20 Sobic.008G093300 - -


Gene co-expression network
sample Sobic002G153600 Sobic002G153600 Sobic006G232100 Sobic006G232100 Sobic002G153600--Sobic006G232100 Sobic003G142800 Sobic003G142800 Sobic002G153600--Sobic003G142800 Sobic006G217400 Sobic006G217400 Sobic002G153600--Sobic006G217400 Sobic004G130500 Sobic004G130500 Sobic002G153600--Sobic004G130500 Sobic006G035350 Sobic006G035350 Sobic002G153600--Sobic006G035350 Sobic004G127733 Sobic004G127733 Sobic002G153600--Sobic004G127733 SobicK031400 SobicK031400 Sobic002G153600--SobicK031400 Sobic004G260250 Sobic004G260250 Sobic002G153600--Sobic004G260250 Sobic010G132400 Sobic010G132400 Sobic002G153600--Sobic010G132400 Sobic006G232100--Sobic003G142800 Sobic006G232100--Sobic002G153600 Sobic006G232100--Sobic010G132400 Sobic006G232100--Sobic004G130500 Sobic003G186066 Sobic003G186066 Sobic006G232100--Sobic003G186066 Sobic003G119200 Sobic003G119200 Sobic006G232100--Sobic003G119200 Sobic006G232100--Sobic004G260250 Sobic005G176300 Sobic005G176300 Sobic006G232100--Sobic005G176300 Sobic010G174000 Sobic010G174000 Sobic006G232100--Sobic010G174000 Sobic003G142800--Sobic010G132400 Sobic005G154600 Sobic005G154600 Sobic003G142800--Sobic005G154600 Sobic004G332200 Sobic004G332200 Sobic003G142800--Sobic004G332200 Sobic004G276600 Sobic004G276600 Sobic003G142800--Sobic004G276600 Sobic003G142800--Sobic006G035350 SobicK031900 SobicK031900 Sobic003G142800--SobicK031900 Sobic001G420150 Sobic001G420150 Sobic003G142800--Sobic001G420150 Sobic001G423200 Sobic001G423200 Sobic003G142800--Sobic001G423200 Sobic003G142800--Sobic004G260250 Sobic003G172966 Sobic003G172966 Sobic006G217400--Sobic003G172966 Sobic007G200700 Sobic007G200700 Sobic006G217400--Sobic007G200700 Sobic004G115100 Sobic004G115100 Sobic006G217400--Sobic004G115100 SobicK032200 SobicK032200 Sobic006G217400--SobicK032200 Sobic006G107700 Sobic006G107700 Sobic006G217400--Sobic006G107700 Sobic003G056200 Sobic003G056200 Sobic006G217400--Sobic003G056200 Sobic006G217400--SobicK031900 Sobic001G261444 Sobic001G261444 Sobic006G217400--Sobic001G261444 Sobic008G100201 Sobic008G100201 Sobic006G217400--Sobic008G100201 Sobic009G209650 Sobic009G209650 Sobic004G130500--Sobic009G209650 Sobic010G143700 Sobic010G143700 Sobic004G130500--Sobic010G143700 Sobic007G103200 Sobic007G103200 Sobic004G130500--Sobic007G103200 Sobic003G268100 Sobic003G268100 Sobic004G130500--Sobic003G268100 Sobic007G116150 Sobic007G116150 Sobic004G130500--Sobic007G116150 Sobic004G130500--Sobic006G035350 Sobic009G094100 Sobic009G094100 Sobic004G130500--Sobic009G094100 SobicK032400 SobicK032400 Sobic004G130500--SobicK032400 SobicK032350 SobicK032350 Sobic004G130500--SobicK032350 Sobic008G093300 Sobic008G093300 Sobic006G035350--Sobic008G093300 Sobic010G247750 Sobic010G247750 Sobic006G035350--Sobic010G247750 Sobic006G035350--Sobic004G127733 Sobic006G035350--Sobic008G100201 Sobic003G260500 Sobic003G260500 Sobic006G035350--Sobic003G260500 Sobic006G035350--Sobic004G115100 Sobic006G035350--Sobic010G143700 Sobic006G035350--Sobic007G103200 Sobic007G127200 Sobic007G127200 Sobic006G035350--Sobic007G127200 Sobic006G176900 Sobic006G176900 Sobic004G127733--Sobic006G176900 Sobic004G127733--Sobic006G035350 Sobic004G127733--Sobic007G103200 Sobic004G127733--Sobic007G127200 Sobic001G045900 Sobic001G045900 Sobic004G127733--Sobic001G045900 Sobic004G127733--Sobic008G093300 Sobic002G154450 Sobic002G154450 Sobic004G127733--Sobic002G154450 Sobic010G052100 Sobic010G052100 Sobic004G127733--Sobic010G052100 Sobic004G127733--Sobic010G247750 SobicK031400--Sobic003G268100 Sobic003G173200 Sobic003G173200 SobicK031400--Sobic003G173200 SobicK031400--Sobic010G143700 SobicK031400--SobicK031900 Sobic009G215100 Sobic009G215100 SobicK031400--Sobic009G215100 Sobic001G224500 Sobic001G224500 SobicK031400--Sobic001G224500 SobicK031400--Sobic007G116150 Sobic006G053550 Sobic006G053550 SobicK031400--Sobic006G053550 Sobic010G098800 Sobic010G098800 SobicK031400--Sobic010G098800 Sobic004G260250--Sobic004G127733 Sobic004G260250--Sobic002G154450 Sobic004G260250--Sobic007G103200 Sobic004G260250--Sobic010G052100 Sobic004G260250--Sobic006G035350 Sobic004G260250--Sobic006G176900 Sobic004G260250--Sobic005G176300 Sobic003G244250 Sobic003G244250 Sobic004G260250--Sobic003G244250 Sobic004G260250--Sobic009G094100 Sobic010G136700 Sobic010G136700 Sobic010G132400--Sobic010G136700 Sobic008G119600 Sobic008G119600 Sobic010G132400--Sobic008G119600 Sobic010G132400--Sobic006G035350 Sobic010G132400--Sobic005G154600 Sobic010G132400--Sobic006G176900 Sobic010G132400--Sobic004G276600 Sobic010G132400--Sobic004G127733 Sobic010G132400--Sobic002G154450 Sobic008G115200 Sobic008G115200 Sobic010G132400--Sobic008G115200
Octagon: transcription factors


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