Gene annotation
Transcriptome id Sobic.010G132100.1
Synonym Sb10g012200
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
thioredoxin domain-containing protein 17, putative, expressed
UniProt C5Z1N7
Pfam PF06110
Panther DB PTHR12452
NCBI CDD KOG3425; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42850 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os06g21550.1 : thioredoxin domain-containing protein 17, putative, expressed
MaizeGDB (Corn) Zm00025a050629
Brachypodium KQJ89062
Barley HORVU7Hr1G046280.1
Wheat TraesCS7B02G192000 , TraesCS7D02G226900 , TraesCS7A02G227500
Populus -


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cDNA sequences
Sobic.010G132100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G027200 tetraspanin family protein, putative, expressed -
2 Sobic.002G112200 - -
3 Sobic.004G223700 - -
4 Sobic.001G050650 - -
5 Sobic.007G098050 - -
6 Sobic.001G449300 LYK, putative, expressed -
7 Sobic.010G098800 NADH-ubiquinone oxidoreductase chain 6, putative, expressed K03884: NADH-ubiquinone oxidoreductase chain 6
8 Sobic.004G206000 - -
9 Sobic.K031400 ATP synthase protein YMF19, putative, expressed K02109: ATPF0B, F-type H+-transporting ATPase subunit b
10 Sobic.K032600 - -
11 Sobic.004G272950 - -
12 Sobic.009G095720 - -
13 Sobic.001G401750 - -
14 Sobic.007G226900 ELF protein, expressed -
15 Sobic.002G145600 expressed protein -
16 Sobic.006G264400 co-chaperone GrpE protein, putative, expressed -
17 Sobic.003G168600 cytochrome b6-f complex subunit 4, putative, expressed K02637: cytochrome b6-f complex subunit 4
18 Sobic.K031300 NADH-ubiquinone oxidoreductase chain 6, putative, expressed -
19 Sobic.009G145200 Up-reguralion under drought(PubMedID : 24916767)@ethylene-responsive transcription factor("PubMedID : 26759170,PubMedID : 24597475")@AP2 domain containing protein, expressed -
20 Sobic.006G217400 expressed protein -


Gene co-expression network
sample Sobic010G132100 Sobic010G132100 Sobic009G027200 Sobic009G027200 Sobic010G132100--Sobic009G027200 Sobic002G112200 Sobic002G112200 Sobic010G132100--Sobic002G112200 Sobic004G223700 Sobic004G223700 Sobic010G132100--Sobic004G223700 Sobic001G050650 Sobic001G050650 Sobic010G132100--Sobic001G050650 Sobic007G098050 Sobic007G098050 Sobic010G132100--Sobic007G098050 Sobic001G449300 Sobic001G449300 Sobic010G132100--Sobic001G449300 Sobic010G098800 Sobic010G098800 Sobic010G132100--Sobic010G098800 Sobic004G206000 Sobic004G206000 Sobic010G132100--Sobic004G206000 SobicK031400 SobicK031400 Sobic010G132100--SobicK031400 Sobic006G217400 Sobic006G217400 Sobic009G027200--Sobic006G217400 Sobic007G200700 Sobic007G200700 Sobic009G027200--Sobic007G200700 Sobic003G226600 Sobic003G226600 Sobic009G027200--Sobic003G226600 Sobic008G093300 Sobic008G093300 Sobic009G027200--Sobic008G093300 Sobic004G115100 Sobic004G115100 Sobic009G027200--Sobic004G115100 Sobic006G029850 Sobic006G029850 Sobic009G027200--Sobic006G029850 Sobic001G207301 Sobic001G207301 Sobic009G027200--Sobic001G207301 Sobic006G035350 Sobic006G035350 Sobic009G027200--Sobic006G035350 Sobic008G100201 Sobic008G100201 Sobic009G027200--Sobic008G100201 Sobic001G401750 Sobic001G401750 Sobic002G112200--Sobic001G401750 Sobic002G112200--Sobic004G223700 Sobic002G112200--Sobic001G050650 SobicK031300 SobicK031300 Sobic002G112200--SobicK031300 Sobic009G095720 Sobic009G095720 Sobic002G112200--Sobic009G095720 Sobic003G168600 Sobic003G168600 Sobic002G112200--Sobic003G168600 SobicK043600 SobicK043600 Sobic002G112200--SobicK043600 Sobic001G081450 Sobic001G081450 Sobic002G112200--Sobic001G081450 Sobic006G264400 Sobic006G264400 Sobic002G112200--Sobic006G264400 Sobic004G223700--Sobic010G098800 Sobic004G223700--Sobic001G081450 Sobic004G272950 Sobic004G272950 Sobic004G223700--Sobic004G272950 Sobic007G116150 Sobic007G116150 Sobic004G223700--Sobic007G116150 Sobic004G223700--Sobic004G206000 SobicK032600 SobicK032600 Sobic004G223700--SobicK032600 SobicK032400 SobicK032400 Sobic004G223700--SobicK032400 Sobic004G223700--Sobic003G168600 Sobic004G223700--SobicK031300 Sobic007G045750 Sobic007G045750 Sobic001G050650--Sobic007G045750 Sobic001G050650--Sobic002G112200 Sobic009G025750 Sobic009G025750 Sobic001G050650--Sobic009G025750 Sobic002G073000 Sobic002G073000 Sobic001G050650--Sobic002G073000 Sobic010G166201 Sobic010G166201 Sobic001G050650--Sobic010G166201 SobicK032500 SobicK032500 Sobic001G050650--SobicK032500 Sobic005G119400 Sobic005G119400 Sobic001G050650--Sobic005G119400 Sobic002G062400 Sobic002G062400 Sobic001G050650--Sobic002G062400 Sobic001G050650--Sobic004G223700 Sobic007G098050--Sobic006G264400 Sobic007G098050--Sobic009G095720 Sobic007G098050--SobicK032400 Sobic007G098050--SobicK032600 Sobic007G098050--Sobic004G206000 Sobic009G145200 Sobic009G145200 Sobic007G098050--Sobic009G145200 Sobic002G112500 Sobic002G112500 Sobic007G098050--Sobic002G112500 Sobic007G098050--Sobic001G081450 Sobic007G098050--Sobic006G029850 Sobic002G074700 Sobic002G074700 Sobic001G449300--Sobic002G074700 Sobic003G172000 Sobic003G172000 Sobic001G449300--Sobic003G172000 Sobic001G449300--SobicK043600 Sobic002G121050 Sobic002G121050 Sobic001G449300--Sobic002G121050 Sobic002G149600 Sobic002G149600 Sobic001G449300--Sobic002G149600 Sobic001G154450 Sobic001G154450 Sobic001G449300--Sobic001G154450 Sobic004G127350 Sobic004G127350 Sobic001G449300--Sobic004G127350 Sobic006G094900 Sobic006G094900 Sobic001G449300--Sobic006G094900 Sobic001G449300--Sobic004G272950 Sobic010G098800--Sobic004G223700 Sobic010G098800--Sobic007G116150 Sobic010G098800--Sobic001G081450 Sobic003G173200 Sobic003G173200 Sobic010G098800--Sobic003G173200 Sobic010G098800--Sobic004G206000 Sobic010G098800--SobicK032600 Sobic009G148400 Sobic009G148400 Sobic010G098800--Sobic009G148400 Sobic010G098800--SobicK032400 Sobic003G268100 Sobic003G268100 Sobic010G098800--Sobic003G268100 Sobic004G206000--SobicK032600 Sobic004G206000--SobicK032400 Sobic004G206000--Sobic001G081450 Sobic004G206000--Sobic007G098050 Sobic004G206000--Sobic007G116150 Sobic004G206000--Sobic004G223700 Sobic004G206000--Sobic010G098800 Sobic004G206000--Sobic006G264400 Sobic007G134300 Sobic007G134300 Sobic004G206000--Sobic007G134300 SobicK031400--Sobic003G268100 SobicK031400--Sobic003G173200 Sobic010G143700 Sobic010G143700 SobicK031400--Sobic010G143700 SobicK031900 SobicK031900 SobicK031400--SobicK031900 Sobic009G215100 Sobic009G215100 SobicK031400--Sobic009G215100 Sobic001G224500 Sobic001G224500 SobicK031400--Sobic001G224500 SobicK031400--Sobic007G116150 Sobic006G053550 Sobic006G053550 SobicK031400--Sobic006G053550 SobicK031400--Sobic010G098800
Octagon: transcription factors


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