Gene annotation
| Transcriptome id | Sobic.004G338200.1 |
|---|---|
| Synonym | Sb04g036600, WAK3 |
| Functional annotation | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543) OsWAK24 - OsWAK receptor-like protein kinase, expressed |
| UniProt | A0A194YSV1 |
| Pfam | PF13947 PF07714 |
| Panther DB | PTHR27005 PTHR27005:SF5 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0006468; protein phosphorylation GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT1G21240 : wall associated kinase 3 |
|---|---|
| RAP-DB (Rice) | LOC_Os02g56630.1 : OsWAK24 - OsWAK receptor-like protein kinase, expressed |
| MaizeGDB (Corn) | Zm00025a022538 , Zm00025a049886 , Zm00025a049889 |
| Brachypodium | KQK01265 , KQK01261 , PNT62316 , PNT69406 |
| Barley | HORVU6Hr1G088730.2 , HORVU6Hr1G088730.3 , HORVU6Hr1G088880.8 , HORVU6Hr1G088880.9 , HORVU6Hr1G088880.4 , HORVU6Hr1G088880.5 , HORVU6Hr1G088880.6 , HORVU6Hr1G088880.7 , HORVU6Hr1G088880.1 , HORVU6Hr1G088880.2 , HORVU6Hr1G088880.3 , HORVU6Hr1G088880.10 |
| Wheat | TraesCS5D02G281200 , TraesCS6B02G413900 , TraesCS6D02G361100 , TraesCS6A02G376000 , TraesCS6D02G361400 , TraesCS6D02G362200 , TraesCS6B02G415100 , TraesCS6B02G415000 , TraesCS5B02G273500 , TraesCS6A02G377700 , TraesCS6B02G414900 , TraesCS6A02G376200 , TraesCS6B02G414000 , TraesCS6A02G376005 , TraesCS6A02G377600 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G020200 | ZOS3-24 - C2H2 zinc finger protein, expressed | - |
| 2 | Sobic.004G243000 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed | - |
| 3 | Sobic.003G314200 | TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 4 | Sobic.007G227500 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein | - |
| 5 | Sobic.008G040800 | OsFBX396 - F-box domain containing protein, expressed | - |
| 6 | Sobic.009G182500 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 7 | Sobic.003G268800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@STE_MEKK_ste11_MAP3K.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed | - |
| 8 | Sobic.009G161700 | expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@COX VIIa, putative, expressed | - |
| 9 | Sobic.006G094800 | - | - |
| 10 | Sobic.009G141201 | - | - |
| 11 | Sobic.003G427400 | signal recognition particle 54 kDa protein, putative, expressed | K03106: SRP54, signal recognition particle subunit SRP54 |
| 12 | Sobic.001G317700 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 13 | Sobic.002G342400 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450 51, putative, expressed | K05917: sterol 14alpha-demethylase |
| 14 | Sobic.007G077200 | Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed | - |
| 15 | Sobic.009G173300 | spotted leaf 11, putative, expressed | - |
| 16 | Sobic.004G052000 | protein kinase, putative, expressed | - |
| 17 | Sobic.006G205800 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed | - |
| 18 | Sobic.003G212300 | mitochondrial chaperone BCS1, putative, expressed | - |
| 19 | Sobic.007G085300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY25, expressed | - |
| 20 | Sobic.004G241100 | NHL repeat-containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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