Gene annotation
Transcriptome id Sobic.007G085300.1
Synonym Sb07g006980, WRKY11, ATWRKY11
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
WRKY25, expressed
UniProt C5YJD3
Pfam PF10533 PF03106
Panther DB PTHR31282 PTHR31282:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G31550 : WRKY DNA-binding protein 11
RAP-DB (Rice) LOC_Os04g51560.1 : WRKY68, expressed
MaizeGDB (Corn) Zm00025a025261 , Zm00025a054955 , Zm00025a004575 , Zm00025a020284 , Zm00025a030906
Brachypodium PNT67981 , KQJ97996 , KQJ97997 , KQJ94313 , KQJ82006 , KQJ95696
Barley HORVU7Hr1G080950.2 , HORVU7Hr1G080950.1 , HORVU7Hr1G080950.4 , HORVU5Hr1G015120.1 , HORVU2Hr1G065750.1 , HORVU2Hr1G065750.3 , HORVU2Hr1G065750.2 , HORVU5Hr1G092770.2 , HORVU5Hr1G092770.1 , HORVU1Hr1G051260.1 , HORVU1Hr1G051260.3 , HORVU1Hr1G051260.2
Wheat TraesCS1D02G200900 , TraesCS1B02G212000 , TraesCS7A02G343000 , TraesCS7D02G336400 , TraesCS7A02G343000 , TraesCS1A02G197400 , TraesCS7B02G240000
Populus -


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cDNA sequences
Sobic.007G085300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G171700 U-box domain-containing protein, putative, expressed -
2 Sobic.010G064000 expressed protein -
3 Sobic.009G200700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@VQ domain containing protein, putative, expressed -
4 Sobic.003G380900 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659872)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed -
5 Sobic.001G190100 serine/threonine-protein kinase receptor precursor, putative, expressed -
6 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
8 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
9 Sobic.001G471200 membrane protein, putative, expressed -
10 Sobic.003G192100 expressed protein -
11 Sobic.004G241100 NHL repeat-containing protein, putative, expressed -
12 Sobic.009G074100 prenylated rab acceptor, putative, expressed -
13 Sobic.001G205350 - -
14 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
15 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.003G320800 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.009G027900 TKL_IRAK_CR4L.4 - The CR4L subfamily has homology with Crinkly4, expressed -
18 Sobic.003G428700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.002G407100 expressed protein -
20 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G085300 Sobic007G085300 Sobic004G171700 Sobic004G171700 Sobic007G085300--Sobic004G171700 Sobic010G064000 Sobic010G064000 Sobic007G085300--Sobic010G064000 Sobic009G200700 Sobic009G200700 Sobic007G085300--Sobic009G200700 Sobic003G380900 Sobic003G380900 Sobic007G085300--Sobic003G380900 Sobic001G190100 Sobic001G190100 Sobic007G085300--Sobic001G190100 Sobic001G391500 Sobic001G391500 Sobic007G085300--Sobic001G391500 Sobic001G459800 Sobic001G459800 Sobic007G085300--Sobic001G459800 Sobic003G228900 Sobic003G228900 Sobic007G085300--Sobic003G228900 Sobic001G471200 Sobic001G471200 Sobic007G085300--Sobic001G471200 Sobic004G171700--Sobic010G064000 Sobic004G229400 Sobic004G229400 Sobic004G171700--Sobic004G229400 Sobic008G174650 Sobic008G174650 Sobic004G171700--Sobic008G174650 Sobic006G187900 Sobic006G187900 Sobic004G171700--Sobic006G187900 Sobic002G234400 Sobic002G234400 Sobic004G171700--Sobic002G234400 Sobic004G097100 Sobic004G097100 Sobic004G171700--Sobic004G097100 Sobic009G183900 Sobic009G183900 Sobic004G171700--Sobic009G183900 Sobic003G144800 Sobic003G144800 Sobic004G171700--Sobic003G144800 Sobic003G427800 Sobic003G427800 Sobic004G171700--Sobic003G427800 Sobic010G064000--Sobic003G427800 Sobic010G064000--Sobic004G229400 Sobic010G064000--Sobic004G171700 Sobic010G064000--Sobic001G471200 Sobic010G064000--Sobic003G228900 Sobic010G064000--Sobic002G234400 Sobic007G017500 Sobic007G017500 Sobic010G064000--Sobic007G017500 Sobic010G064000--Sobic004G097100 Sobic007G058400 Sobic007G058400 Sobic010G064000--Sobic007G058400 Sobic002G140300 Sobic002G140300 Sobic009G200700--Sobic002G140300 Sobic009G036100 Sobic009G036100 Sobic009G200700--Sobic009G036100 Sobic003G324400 Sobic003G324400 Sobic009G200700--Sobic003G324400 Sobic002G356101 Sobic002G356101 Sobic009G200700--Sobic002G356101 Sobic006G165100 Sobic006G165100 Sobic009G200700--Sobic006G165100 Sobic001G040200 Sobic001G040200 Sobic009G200700--Sobic001G040200 Sobic009G129000 Sobic009G129000 Sobic009G200700--Sobic009G129000 Sobic006G230500 Sobic006G230500 Sobic009G200700--Sobic006G230500 Sobic001G258300 Sobic001G258300 Sobic009G200700--Sobic001G258300 Sobic003G428700 Sobic003G428700 Sobic003G380900--Sobic003G428700 Sobic001G079300 Sobic001G079300 Sobic003G380900--Sobic001G079300 Sobic009G122400 Sobic009G122400 Sobic003G380900--Sobic009G122400 Sobic010G209200 Sobic010G209200 Sobic003G380900--Sobic010G209200 Sobic004G191400 Sobic004G191400 Sobic003G380900--Sobic004G191400 Sobic004G222500 Sobic004G222500 Sobic003G380900--Sobic004G222500 Sobic009G247900 Sobic009G247900 Sobic003G380900--Sobic009G247900 Sobic001G205350 Sobic001G205350 Sobic003G380900--Sobic001G205350 Sobic003G093000 Sobic003G093000 Sobic003G380900--Sobic003G093000 Sobic009G189501 Sobic009G189501 Sobic001G190100--Sobic009G189501 Sobic007G006300 Sobic007G006300 Sobic001G190100--Sobic007G006300 Sobic001G397300 Sobic001G397300 Sobic001G190100--Sobic001G397300 Sobic001G105900 Sobic001G105900 Sobic001G190100--Sobic001G105900 Sobic001G190100--Sobic002G234400 Sobic001G190100--Sobic001G391500 Sobic002G250000 Sobic002G250000 Sobic001G190100--Sobic002G250000 Sobic003G260300 Sobic003G260300 Sobic001G190100--Sobic003G260300 Sobic002G339000 Sobic002G339000 Sobic001G190100--Sobic002G339000 Sobic001G391500--Sobic001G459800 Sobic004G141200 Sobic004G141200 Sobic001G391500--Sobic004G141200 Sobic003G144700 Sobic003G144700 Sobic001G391500--Sobic003G144700 Sobic007G213800 Sobic007G213800 Sobic001G391500--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic001G391500--Sobic001G320900 Sobic003G148600 Sobic003G148600 Sobic001G391500--Sobic003G148600 Sobic003G369100 Sobic003G369100 Sobic001G391500--Sobic003G369100 Sobic001G138600 Sobic001G138600 Sobic001G391500--Sobic001G138600 Sobic007G074000 Sobic007G074000 Sobic001G391500--Sobic007G074000 Sobic001G459800--Sobic001G391500 Sobic006G267200 Sobic006G267200 Sobic001G459800--Sobic006G267200 Sobic001G459800--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G459800--Sobic003G393900 Sobic001G459800--Sobic003G228900 Sobic004G065500 Sobic004G065500 Sobic001G459800--Sobic004G065500 Sobic001G459800--Sobic001G138600 Sobic001G459800--Sobic007G074000 Sobic005G011300 Sobic005G011300 Sobic001G459800--Sobic005G011300 Sobic006G075400 Sobic006G075400 Sobic003G228900--Sobic006G075400 Sobic003G228900--Sobic010G209200 Sobic009G184000 Sobic009G184000 Sobic003G228900--Sobic009G184000 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G228900--Sobic003G260300 Sobic003G228900--Sobic007G017500 Sobic003G228900--Sobic009G122400 Sobic003G228900--Sobic001G079300 Sobic004G341800 Sobic004G341800 Sobic001G471200--Sobic004G341800 Sobic001G035100 Sobic001G035100 Sobic001G471200--Sobic001G035100 Sobic004G228500 Sobic004G228500 Sobic001G471200--Sobic004G228500 Sobic001G471200--Sobic003G228900 Sobic006G103000 Sobic006G103000 Sobic001G471200--Sobic006G103000 Sobic004G219800 Sobic004G219800 Sobic001G471200--Sobic004G219800 Sobic006G183400 Sobic006G183400 Sobic001G471200--Sobic006G183400 Sobic010G223600 Sobic010G223600 Sobic001G471200--Sobic010G223600 Sobic004G243100 Sobic004G243100 Sobic001G471200--Sobic004G243100
Octagon: transcription factors


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