Gene annotation
Transcriptome id Sobic.003G320800.1
Synonym RCI3A, Sb03g036760, RCI3
Functional annotation peroxidase precursor, putative, expressed
UniProt C5XMB6
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF23
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G05260 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os01g57730.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a027247
Brachypodium KQK10120
Barley -
Wheat TraesCS3A02G325100 , TraesCS3A02G325100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
2 Sobic.010G136000 expressed protein -
3 Sobic.003G033900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
4 Sobic.003G021500 sodium/calcium exchanger protein, putative, expressed -
5 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
6 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
7 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
8 Sobic.006G234800 expressed protein -
9 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
11 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
12 Sobic.001G365100 lipase, putative, expressed -
13 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
14 Sobic.002G082600 DUF567 domain containing protein, putative, expressed -
15 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
16 Sobic.007G057000 expressed protein -
17 Sobic.009G068600 transferase family protein, putative, expressed -
18 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
19 Sobic.009G036000 similar to Hydrophobic protein LTI6B(PubMedID : 29862293)@OsRCI2-6 - Hydrophobic protein LTI6B, expressed -
20 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase


Gene co-expression network
sample Sobic003G320800 Sobic003G320800 Sobic007G155000 Sobic007G155000 Sobic003G320800--Sobic007G155000 Sobic010G136000 Sobic010G136000 Sobic003G320800--Sobic010G136000 Sobic003G033900 Sobic003G033900 Sobic003G320800--Sobic003G033900 Sobic003G021500 Sobic003G021500 Sobic003G320800--Sobic003G021500 Sobic007G036900 Sobic007G036900 Sobic003G320800--Sobic007G036900 Sobic002G188900 Sobic002G188900 Sobic003G320800--Sobic002G188900 Sobic002G319500 Sobic002G319500 Sobic003G320800--Sobic002G319500 Sobic006G234800 Sobic006G234800 Sobic003G320800--Sobic006G234800 Sobic001G435000 Sobic001G435000 Sobic003G320800--Sobic001G435000 Sobic007G155000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic007G155000--Sobic004G208700 Sobic009G234100 Sobic009G234100 Sobic007G155000--Sobic009G234100 Sobic009G159400 Sobic009G159400 Sobic007G155000--Sobic009G159400 Sobic002G140400 Sobic002G140400 Sobic007G155000--Sobic002G140400 Sobic004G229800 Sobic004G229800 Sobic007G155000--Sobic004G229800 Sobic001G038900 Sobic001G038900 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic010G259600 Sobic010G259600 Sobic007G155000--Sobic010G259600 Sobic010G136000--Sobic010G066700 Sobic007G025500 Sobic007G025500 Sobic010G136000--Sobic007G025500 Sobic009G183400 Sobic009G183400 Sobic010G136000--Sobic009G183400 Sobic010G136000--Sobic003G320800 Sobic007G057000 Sobic007G057000 Sobic010G136000--Sobic007G057000 Sobic004G340900 Sobic004G340900 Sobic010G136000--Sobic004G340900 Sobic010G136000--Sobic001G038900 Sobic004G259366 Sobic004G259366 Sobic010G136000--Sobic004G259366 Sobic010G136000--Sobic002G188900 Sobic003G033900--Sobic002G188900 Sobic001G108200 Sobic001G108200 Sobic003G033900--Sobic001G108200 Sobic004G100700 Sobic004G100700 Sobic003G033900--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G033900--Sobic003G393900 Sobic001G476500 Sobic001G476500 Sobic003G033900--Sobic001G476500 Sobic004G304625 Sobic004G304625 Sobic003G033900--Sobic004G304625 Sobic005G011300 Sobic005G011300 Sobic003G033900--Sobic005G011300 Sobic004G141200 Sobic004G141200 Sobic003G033900--Sobic004G141200 Sobic003G033900--Sobic004G229800 Sobic003G364600 Sobic003G364600 Sobic003G021500--Sobic003G364600 Sobic003G202200 Sobic003G202200 Sobic003G021500--Sobic003G202200 Sobic001G449700 Sobic001G449700 Sobic003G021500--Sobic001G449700 Sobic009G036000 Sobic009G036000 Sobic003G021500--Sobic009G036000 Sobic003G021500--Sobic003G320800 Sobic001G383700 Sobic001G383700 Sobic003G021500--Sobic001G383700 Sobic002G034500 Sobic002G034500 Sobic003G021500--Sobic002G034500 Sobic002G082600 Sobic002G082600 Sobic003G021500--Sobic002G082600 Sobic002G312400 Sobic002G312400 Sobic003G021500--Sobic002G312400 Sobic004G004500 Sobic004G004500 Sobic007G036900--Sobic004G004500 Sobic008G187001 Sobic008G187001 Sobic007G036900--Sobic008G187001 Sobic007G036900--Sobic004G229800 Sobic001G256700 Sobic001G256700 Sobic007G036900--Sobic001G256700 Sobic007G036900--Sobic004G141200 Sobic002G339000 Sobic002G339000 Sobic007G036900--Sobic002G339000 Sobic007G036900--Sobic003G364600 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic002G188900--Sobic004G100700 Sobic002G188900--Sobic005G011300 Sobic002G188900--Sobic003G033900 Sobic001G140900 Sobic001G140900 Sobic002G188900--Sobic001G140900 Sobic002G188900--Sobic004G141200 Sobic002G188900--Sobic003G393900 Sobic002G188900--Sobic001G108200 Sobic002G188900--Sobic004G304625 Sobic002G188900--Sobic007G057000 Sobic002G192000 Sobic002G192000 Sobic002G319500--Sobic002G192000 Sobic002G319500--Sobic003G320800 Sobic001G192600 Sobic001G192600 Sobic002G319500--Sobic001G192600 Sobic002G319500--Sobic010G136000 Sobic002G319500--Sobic001G038900 Sobic002G319500--Sobic002G140400 Sobic003G430400 Sobic003G430400 Sobic002G319500--Sobic003G430400 Sobic002G319500--Sobic007G155000 Sobic001G367600 Sobic001G367600 Sobic002G319500--Sobic001G367600 Sobic006G234800--Sobic001G435000 Sobic001G231700 Sobic001G231700 Sobic006G234800--Sobic001G231700 Sobic006G234800--Sobic004G229800 Sobic001G304100 Sobic001G304100 Sobic006G234800--Sobic001G304100 Sobic006G132900 Sobic006G132900 Sobic006G234800--Sobic006G132900 Sobic001G402200 Sobic001G402200 Sobic006G234800--Sobic001G402200 Sobic006G234800--Sobic001G367600 Sobic007G017500 Sobic007G017500 Sobic006G234800--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic006G234800--Sobic006G075400 Sobic001G435000--Sobic004G208700 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic003G345100 Sobic003G345100 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic008G050600 Sobic008G050600 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.