Gene annotation
Transcriptome id Sobic.004G052000.1,Sobic.004G052000.2
Synonym
Functional annotation protein kinase, putative, expressed
UniProt A0A194YMX6
Pfam PF07714
Panther DB PTHR27006 PTHR27006:SF7
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G16670 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g06930.1 : protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a034813
Brachypodium KQK17128
Barley HORVU7Hr1G106450.3 , HORVU7Hr1G106450.2 , HORVU7Hr1G106450.1 , HORVU7Hr1G106450.5 , HORVU7Hr1G106450.4 , HORVU0Hr1G015530.4 , HORVU0Hr1G015530.5 , HORVU0Hr1G015530.6 , HORVU0Hr1G015530.7 , HORVU0Hr1G015530.1 , HORVU0Hr1G015530.2 , HORVU0Hr1G015530.3
Wheat TraesCS6B02G167900 , TraesCS6A02G139400 , TraesCS6A02G139400 , TraesCS6B02G431300 , TraesCS6D02G129900 , TraesCS7D02G451300 , TraesCS7A02G463500
Populus PNT42054 , PNT42052 , PNT42063 , PNT41085 , PNT41084


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cDNA sequences
Sobic.004G052000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G296700 protein kinase domain containing protein, expressed -
2 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
3 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
4 Sobic.003G234000 DUF1645 domain containing protein, putative, expressed -
5 Sobic.007G057100 expressed protein -
6 Sobic.009G217600 STE_MEKK_ste11_MAP3K.19 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
7 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
8 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
10 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
11 Sobic.001G341600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tyrosine protein kinase domain containing protein, putative, expressed -
12 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
13 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
14 Sobic.009G073300 harpin-induced protein 1 domain containing protein, expressed -
15 Sobic.001G532200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsRhmbd7 - Putative Rhomboid homologue, expressed -
16 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
18 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
19 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
20 Sobic.008G042900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G052000 Sobic004G052000 Sobic003G296700 Sobic003G296700 Sobic004G052000--Sobic003G296700 Sobic010G076600 Sobic010G076600 Sobic004G052000--Sobic010G076600 Sobic001G051600 Sobic001G051600 Sobic004G052000--Sobic001G051600 Sobic003G234000 Sobic003G234000 Sobic004G052000--Sobic003G234000 Sobic007G057100 Sobic007G057100 Sobic004G052000--Sobic007G057100 Sobic009G217600 Sobic009G217600 Sobic004G052000--Sobic009G217600 Sobic006G095600 Sobic006G095600 Sobic004G052000--Sobic006G095600 Sobic001G077700 Sobic001G077700 Sobic004G052000--Sobic001G077700 Sobic001G513700 Sobic001G513700 Sobic004G052000--Sobic001G513700 Sobic001G516600 Sobic001G516600 Sobic003G296700--Sobic001G516600 Sobic009G208800 Sobic009G208800 Sobic003G296700--Sobic009G208800 Sobic009G220200 Sobic009G220200 Sobic003G296700--Sobic009G220200 Sobic001G341600 Sobic001G341600 Sobic003G296700--Sobic001G341600 Sobic003G296700--Sobic009G217600 Sobic003G296700--Sobic010G076600 Sobic003G296700--Sobic006G095600 Sobic002G374100 Sobic002G374100 Sobic003G296700--Sobic002G374100 Sobic002G294700 Sobic002G294700 Sobic003G296700--Sobic002G294700 Sobic006G184400 Sobic006G184400 Sobic010G076600--Sobic006G184400 Sobic001G209800 Sobic001G209800 Sobic010G076600--Sobic001G209800 Sobic001G476400 Sobic001G476400 Sobic010G076600--Sobic001G476400 Sobic001G473900 Sobic001G473900 Sobic010G076600--Sobic001G473900 Sobic010G076600--Sobic009G217600 Sobic003G338900 Sobic003G338900 Sobic010G076600--Sobic003G338900 Sobic008G036000 Sobic008G036000 Sobic010G076600--Sobic008G036000 Sobic010G076600--Sobic006G095600 Sobic010G076600--Sobic003G296700 Sobic001G489600 Sobic001G489600 Sobic001G051600--Sobic001G489600 Sobic001G051600--Sobic001G476400 Sobic001G051600--Sobic006G095600 Sobic002G203000 Sobic002G203000 Sobic001G051600--Sobic002G203000 Sobic001G051600--Sobic007G057100 Sobic004G051166 Sobic004G051166 Sobic001G051600--Sobic004G051166 Sobic008G159100 Sobic008G159100 Sobic001G051600--Sobic008G159100 Sobic001G081600 Sobic001G081600 Sobic001G051600--Sobic001G081600 Sobic004G025000 Sobic004G025000 Sobic001G051600--Sobic004G025000 Sobic004G280900 Sobic004G280900 Sobic003G234000--Sobic004G280900 Sobic002G140300 Sobic002G140300 Sobic003G234000--Sobic002G140300 Sobic003G234000--Sobic001G341600 Sobic010G209100 Sobic010G209100 Sobic003G234000--Sobic010G209100 Sobic001G538866 Sobic001G538866 Sobic003G234000--Sobic001G538866 Sobic001G077400 Sobic001G077400 Sobic003G234000--Sobic001G077400 Sobic003G234000--Sobic009G217600 Sobic007G077200 Sobic007G077200 Sobic003G234000--Sobic007G077200 Sobic009G192600 Sobic009G192600 Sobic003G234000--Sobic009G192600 Sobic007G057100--Sobic001G489600 Sobic007G057100--Sobic002G203000 Sobic007G057100--Sobic001G513700 Sobic007G057100--Sobic006G095600 Sobic004G286600 Sobic004G286600 Sobic007G057100--Sobic004G286600 Sobic007G057100--Sobic001G077700 Sobic007G057100--Sobic001G051600 Sobic004G147900 Sobic004G147900 Sobic007G057100--Sobic004G147900 Sobic007G057100--Sobic001G473900 Sobic001G441100 Sobic001G441100 Sobic009G217600--Sobic001G441100 Sobic009G217600--Sobic001G341600 Sobic009G217600--Sobic001G077400 Sobic001G035000 Sobic001G035000 Sobic009G217600--Sobic001G035000 Sobic009G217600--Sobic004G280900 Sobic009G217600--Sobic001G209800 Sobic005G037000 Sobic005G037000 Sobic009G217600--Sobic005G037000 Sobic003G353800 Sobic003G353800 Sobic009G217600--Sobic003G353800 Sobic002G278500 Sobic002G278500 Sobic009G217600--Sobic002G278500 Sobic006G095600--Sobic001G489600 Sobic006G095600--Sobic002G203000 Sobic006G095600--Sobic001G051600 Sobic006G095600--Sobic001G077700 Sobic009G071800 Sobic009G071800 Sobic006G095600--Sobic009G071800 Sobic006G095600--Sobic007G057100 Sobic004G084100 Sobic004G084100 Sobic006G095600--Sobic004G084100 Sobic006G095600--Sobic001G473900 Sobic006G095600--Sobic001G476400 Sobic001G077700--Sobic009G071800 Sobic010G234600 Sobic010G234600 Sobic001G077700--Sobic010G234600 Sobic001G077700--Sobic002G203000 Sobic002G248100 Sobic002G248100 Sobic001G077700--Sobic002G248100 Sobic001G077700--Sobic002G294700 Sobic008G177800 Sobic008G177800 Sobic001G077700--Sobic008G177800 Sobic001G077700--Sobic004G286600 Sobic010G234700 Sobic010G234700 Sobic001G077700--Sobic010G234700 Sobic001G077700--Sobic001G489600 Sobic001G513700--Sobic008G177800 Sobic007G151100 Sobic007G151100 Sobic001G513700--Sobic007G151100 Sobic002G036100 Sobic002G036100 Sobic001G513700--Sobic002G036100 Sobic001G513700--Sobic001G516600 Sobic001G532200 Sobic001G532200 Sobic001G513700--Sobic001G532200 Sobic006G231100 Sobic006G231100 Sobic001G513700--Sobic006G231100 Sobic001G513700--Sobic002G294700 Sobic001G513700--Sobic007G057100 Sobic006G089300 Sobic006G089300 Sobic001G513700--Sobic006G089300
Octagon: transcription factors


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