Gene annotation
Transcriptome id Sobic.007G057100.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PFS5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g07490.1 : expressed protein
MaizeGDB (Corn) Zm00025a055041
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G057100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G489600 expressed protein -
2 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
3 Sobic.001G513700 down-regulated TF in developmental senescence(PubMedID : 27586543)@BHLH transcription factor, putative, expressed -
4 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
5 Sobic.004G286600 Protecting the plants under varied stress situations(PubMedID : 26536883)@dehydrin, putative, expressed -
6 Sobic.001G077700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
8 Sobic.004G147900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
9 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.009G208800 hydrolase, acting on carbon-nitrogen, putative, expressed -
11 Sobic.006G194100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
12 Sobic.002G294700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
13 Sobic.008G177800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
14 Sobic.003G296700 protein kinase domain containing protein, expressed -
15 Sobic.009G073300 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
18 Sobic.004G051166 - -
19 Sobic.004G257300 GPI-anchored protein, putative, expressed -
20 Sobic.009G258300 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G057100 Sobic007G057100 Sobic001G489600 Sobic001G489600 Sobic007G057100--Sobic001G489600 Sobic002G203000 Sobic002G203000 Sobic007G057100--Sobic002G203000 Sobic001G513700 Sobic001G513700 Sobic007G057100--Sobic001G513700 Sobic006G095600 Sobic006G095600 Sobic007G057100--Sobic006G095600 Sobic004G286600 Sobic004G286600 Sobic007G057100--Sobic004G286600 Sobic001G077700 Sobic001G077700 Sobic007G057100--Sobic001G077700 Sobic001G051600 Sobic001G051600 Sobic007G057100--Sobic001G051600 Sobic004G147900 Sobic004G147900 Sobic007G057100--Sobic004G147900 Sobic001G473900 Sobic001G473900 Sobic007G057100--Sobic001G473900 Sobic001G489600--Sobic001G051600 Sobic001G489600--Sobic006G095600 Sobic001G489600--Sobic001G077700 Sobic001G489600--Sobic002G203000 Sobic001G489600--Sobic007G057100 Sobic004G280900 Sobic004G280900 Sobic001G489600--Sobic004G280900 Sobic001G476400 Sobic001G476400 Sobic001G489600--Sobic001G476400 Sobic009G071800 Sobic009G071800 Sobic001G489600--Sobic009G071800 Sobic001G489600--Sobic004G286600 Sobic002G203000--Sobic001G077700 Sobic002G203000--Sobic009G071800 Sobic002G203000--Sobic006G095600 Sobic002G203000--Sobic001G489600 Sobic010G076700 Sobic010G076700 Sobic002G203000--Sobic010G076700 Sobic009G258300 Sobic009G258300 Sobic002G203000--Sobic009G258300 Sobic002G203000--Sobic001G473900 Sobic002G203000--Sobic007G057100 Sobic002G248100 Sobic002G248100 Sobic002G203000--Sobic002G248100 Sobic008G177800 Sobic008G177800 Sobic001G513700--Sobic008G177800 Sobic007G151100 Sobic007G151100 Sobic001G513700--Sobic007G151100 Sobic002G036100 Sobic002G036100 Sobic001G513700--Sobic002G036100 Sobic001G516600 Sobic001G516600 Sobic001G513700--Sobic001G516600 Sobic001G532200 Sobic001G532200 Sobic001G513700--Sobic001G532200 Sobic006G231100 Sobic006G231100 Sobic001G513700--Sobic006G231100 Sobic002G294700 Sobic002G294700 Sobic001G513700--Sobic002G294700 Sobic001G513700--Sobic007G057100 Sobic006G089300 Sobic006G089300 Sobic001G513700--Sobic006G089300 Sobic006G095600--Sobic001G489600 Sobic006G095600--Sobic002G203000 Sobic006G095600--Sobic001G051600 Sobic006G095600--Sobic001G077700 Sobic006G095600--Sobic009G071800 Sobic006G095600--Sobic007G057100 Sobic004G084100 Sobic004G084100 Sobic006G095600--Sobic004G084100 Sobic006G095600--Sobic001G473900 Sobic006G095600--Sobic001G476400 Sobic004G286600--Sobic008G177800 Sobic004G286600--Sobic006G231100 Sobic004G286600--Sobic002G294700 Sobic004G286600--Sobic001G077700 Sobic010G234600 Sobic010G234600 Sobic004G286600--Sobic010G234600 Sobic004G286600--Sobic002G036100 Sobic004G286600--Sobic002G248100 Sobic006G179500 Sobic006G179500 Sobic004G286600--Sobic006G179500 Sobic002G140300 Sobic002G140300 Sobic004G286600--Sobic002G140300 Sobic001G077700--Sobic009G071800 Sobic001G077700--Sobic010G234600 Sobic001G077700--Sobic002G203000 Sobic001G077700--Sobic002G248100 Sobic001G077700--Sobic002G294700 Sobic001G077700--Sobic008G177800 Sobic001G077700--Sobic004G286600 Sobic010G234700 Sobic010G234700 Sobic001G077700--Sobic010G234700 Sobic001G077700--Sobic001G489600 Sobic001G051600--Sobic001G489600 Sobic001G051600--Sobic001G476400 Sobic001G051600--Sobic006G095600 Sobic001G051600--Sobic002G203000 Sobic001G051600--Sobic007G057100 Sobic004G051166 Sobic004G051166 Sobic001G051600--Sobic004G051166 Sobic008G159100 Sobic008G159100 Sobic001G051600--Sobic008G159100 Sobic001G081600 Sobic001G081600 Sobic001G051600--Sobic001G081600 Sobic004G025000 Sobic004G025000 Sobic001G051600--Sobic004G025000 Sobic004G147900--Sobic007G057100 Sobic003G035700 Sobic003G035700 Sobic004G147900--Sobic003G035700 Sobic001G290400 Sobic001G290400 Sobic004G147900--Sobic001G290400 Sobic009G155200 Sobic009G155200 Sobic004G147900--Sobic009G155200 Sobic003G423500 Sobic003G423500 Sobic004G147900--Sobic003G423500 Sobic004G147900--Sobic004G051166 Sobic003G158500 Sobic003G158500 Sobic004G147900--Sobic003G158500 Sobic004G147900--Sobic001G513700 Sobic007G171000 Sobic007G171000 Sobic004G147900--Sobic007G171000 Sobic001G473900--Sobic001G476400 Sobic010G076600 Sobic010G076600 Sobic001G473900--Sobic010G076600 Sobic001G473900--Sobic002G203000 Sobic001G473900--Sobic009G071800 Sobic001G473900--Sobic001G077700 Sobic001G473900--Sobic006G095600 Sobic001G209800 Sobic001G209800 Sobic001G473900--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic001G473900--Sobic003G268700 Sobic001G473900--Sobic002G248100
Octagon: transcription factors


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