Gene annotation
Transcriptome id Sobic.004G051166.1
Synonym -
Functional annotation -
UniProt A0A1Z5RLU2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G051600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ATPase, putative, expressed -
2 Sobic.001G482700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
3 Sobic.001G473900 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
4 Sobic.001G476400 - -
5 Sobic.007G057100 expressed protein -
6 Sobic.006G095600 lipoxygenase (LOX) that catalyzes the first committed step of JA biosynthesis(PubMedID : 31597271)@lipoxygenase protein, putative, expressed K00454: lipoxygenase
7 Sobic.001G489600 expressed protein -
8 Sobic.004G280900 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.010G076600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Serine/threonine-protein kinase RIPK(PubMedID : 31721651)@tyrosine protein kinase domain containing protein, putative, expressed -
10 Sobic.006G211400 Terpenoid cyclases/Protein prenyltransferases superfamily protein("PubMedID : 26759170,PubMedID : 24597475")@terpene synthase, putative, expressed K15793: acyclic sesquiterpene synthase
11 Sobic.002G344700 remorin, putative, expressed -
12 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.004G147900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
14 Sobic.002G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.34 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.004G053200 Cupin domain containing protein, expressed -
16 Sobic.004G025000 CAMK_CAMK_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.001G209800 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.004G311500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR12 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
19 Sobic.004G283300 AP2 domain containing protein, expressed -
20 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -


Gene co-expression network
sample Sobic004G051166 Sobic004G051166 Sobic001G051600 Sobic001G051600 Sobic004G051166--Sobic001G051600 Sobic001G482700 Sobic001G482700 Sobic004G051166--Sobic001G482700 Sobic001G473900 Sobic001G473900 Sobic004G051166--Sobic001G473900 Sobic001G476400 Sobic001G476400 Sobic004G051166--Sobic001G476400 Sobic007G057100 Sobic007G057100 Sobic004G051166--Sobic007G057100 Sobic006G095600 Sobic006G095600 Sobic004G051166--Sobic006G095600 Sobic001G489600 Sobic001G489600 Sobic004G051166--Sobic001G489600 Sobic004G280900 Sobic004G280900 Sobic004G051166--Sobic004G280900 Sobic010G076600 Sobic010G076600 Sobic004G051166--Sobic010G076600 Sobic001G051600--Sobic001G489600 Sobic001G051600--Sobic001G476400 Sobic001G051600--Sobic006G095600 Sobic002G203000 Sobic002G203000 Sobic001G051600--Sobic002G203000 Sobic001G051600--Sobic007G057100 Sobic001G051600--Sobic004G051166 Sobic008G159100 Sobic008G159100 Sobic001G051600--Sobic008G159100 Sobic001G081600 Sobic001G081600 Sobic001G051600--Sobic001G081600 Sobic004G025000 Sobic004G025000 Sobic001G051600--Sobic004G025000 Sobic001G482700--Sobic004G051166 Sobic002G021300 Sobic002G021300 Sobic001G482700--Sobic002G021300 Sobic004G268700 Sobic004G268700 Sobic001G482700--Sobic004G268700 Sobic008G036000 Sobic008G036000 Sobic001G482700--Sobic008G036000 Sobic001G290400 Sobic001G290400 Sobic001G482700--Sobic001G290400 Sobic001G403600 Sobic001G403600 Sobic001G482700--Sobic001G403600 Sobic001G482700--Sobic001G081600 Sobic002G344700 Sobic002G344700 Sobic001G482700--Sobic002G344700 Sobic002G197600 Sobic002G197600 Sobic001G482700--Sobic002G197600 Sobic001G473900--Sobic001G476400 Sobic001G473900--Sobic010G076600 Sobic001G473900--Sobic002G203000 Sobic009G071800 Sobic009G071800 Sobic001G473900--Sobic009G071800 Sobic001G077700 Sobic001G077700 Sobic001G473900--Sobic001G077700 Sobic001G473900--Sobic006G095600 Sobic001G209800 Sobic001G209800 Sobic001G473900--Sobic001G209800 Sobic003G268700 Sobic003G268700 Sobic001G473900--Sobic003G268700 Sobic002G248100 Sobic002G248100 Sobic001G473900--Sobic002G248100 Sobic001G063600 Sobic001G063600 Sobic001G476400--Sobic001G063600 Sobic001G476400--Sobic001G051600 Sobic001G476400--Sobic001G473900 Sobic001G476400--Sobic010G076600 Sobic001G476400--Sobic001G081600 Sobic010G080400 Sobic010G080400 Sobic001G476400--Sobic010G080400 Sobic001G476400--Sobic006G095600 Sobic004G283300 Sobic004G283300 Sobic001G476400--Sobic004G283300 Sobic001G476400--Sobic001G489600 Sobic007G057100--Sobic001G489600 Sobic007G057100--Sobic002G203000 Sobic001G513700 Sobic001G513700 Sobic007G057100--Sobic001G513700 Sobic007G057100--Sobic006G095600 Sobic004G286600 Sobic004G286600 Sobic007G057100--Sobic004G286600 Sobic007G057100--Sobic001G077700 Sobic007G057100--Sobic001G051600 Sobic004G147900 Sobic004G147900 Sobic007G057100--Sobic004G147900 Sobic007G057100--Sobic001G473900 Sobic006G095600--Sobic001G489600 Sobic006G095600--Sobic002G203000 Sobic006G095600--Sobic001G051600 Sobic006G095600--Sobic001G077700 Sobic006G095600--Sobic009G071800 Sobic006G095600--Sobic007G057100 Sobic004G084100 Sobic004G084100 Sobic006G095600--Sobic004G084100 Sobic006G095600--Sobic001G473900 Sobic006G095600--Sobic001G476400 Sobic001G489600--Sobic001G051600 Sobic001G489600--Sobic006G095600 Sobic001G489600--Sobic001G077700 Sobic001G489600--Sobic002G203000 Sobic001G489600--Sobic007G057100 Sobic001G489600--Sobic004G280900 Sobic001G489600--Sobic001G476400 Sobic001G489600--Sobic009G071800 Sobic001G489600--Sobic004G286600 Sobic001G077400 Sobic001G077400 Sobic004G280900--Sobic001G077400 Sobic005G037000 Sobic005G037000 Sobic004G280900--Sobic005G037000 Sobic009G217600 Sobic009G217600 Sobic004G280900--Sobic009G217600 Sobic004G280900--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic004G280900--Sobic001G441100 Sobic002G036100 Sobic002G036100 Sobic004G280900--Sobic002G036100 Sobic002G140300 Sobic002G140300 Sobic004G280900--Sobic002G140300 Sobic001G538866 Sobic001G538866 Sobic004G280900--Sobic001G538866 Sobic001G341600 Sobic001G341600 Sobic004G280900--Sobic001G341600 Sobic006G184400 Sobic006G184400 Sobic010G076600--Sobic006G184400 Sobic010G076600--Sobic001G209800 Sobic010G076600--Sobic001G476400 Sobic010G076600--Sobic001G473900 Sobic010G076600--Sobic009G217600 Sobic003G338900 Sobic003G338900 Sobic010G076600--Sobic003G338900 Sobic010G076600--Sobic008G036000 Sobic010G076600--Sobic006G095600 Sobic003G296700 Sobic003G296700 Sobic010G076600--Sobic003G296700
Octagon: transcription factors


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