Gene annotation
Transcriptome id Sobic.009G161700.1
Synonym Sb09g022400,
Functional annotation expressed high in San Chi San (an efficient nitrogen user) (PubMedID : 28697783)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
COX VIIa, putative, expressed
UniProt C5YZ82
Pfam PF02238
Panther DB PTHR35308 PTHR35308:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21105 : cytochrome-c oxidases;electron carriers
RAP-DB (Rice) LOC_Os02g06650.1 : COX VIIa, putative, expressed
MaizeGDB (Corn) Zm00025a048980
Brachypodium KQK05931
Barley -
Wheat TraesCS1D02G282100 , TraesCS1A02G282900 , TraesCS1B02G291800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G020200 ZOS3-24 - C2H2 zinc finger protein, expressed -
2 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.009G182500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
5 Sobic.003G354050 - -
6 Sobic.004G176950 - -
7 Sobic.003G365500 no apical meristem protein, putative, expressed -
8 Sobic.001G234733 - -
9 Sobic.001G423600 avr9/Cf-9 rapidly elicited protein, putative, expressed -
10 Sobic.006G094800 - -
11 Sobic.001G148000 a WRKY transcription factor which regulates cell wall biosynthesis genes. Seed shattering-related gene.(PubMedID : 24019506)@WRKY60, expressed -
12 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
13 Sobic.001G073800 receptor-like kinase, putative, expressed -
14 Sobic.002G406000 expressed protein K07466: RFA1, RPA1, replication factor A1
15 Sobic.001G045500 RD26, putative, expressed -
16 Sobic.002G277000 - -
17 Sobic.005G008400 pentatricopeptide, putative, expressed -
18 Sobic.001G515400 AMP-binding enzyme, putative, expressed -
19 Sobic.007G006501 - K01183: chitinase
20 Sobic.003G277550 - -


Gene co-expression network
sample Sobic009G161700 Sobic009G161700 Sobic001G020200 Sobic001G020200 Sobic009G161700--Sobic001G020200 Sobic004G338200 Sobic004G338200 Sobic009G161700--Sobic004G338200 Sobic009G182500 Sobic009G182500 Sobic009G161700--Sobic009G182500 Sobic003G314200 Sobic003G314200 Sobic009G161700--Sobic003G314200 Sobic003G354050 Sobic003G354050 Sobic009G161700--Sobic003G354050 Sobic004G176950 Sobic004G176950 Sobic009G161700--Sobic004G176950 Sobic003G365500 Sobic003G365500 Sobic009G161700--Sobic003G365500 Sobic001G234733 Sobic001G234733 Sobic009G161700--Sobic001G234733 Sobic001G423600 Sobic001G423600 Sobic009G161700--Sobic001G423600 Sobic001G020200--Sobic004G338200 Sobic004G216900 Sobic004G216900 Sobic001G020200--Sobic004G216900 Sobic007G122500 Sobic007G122500 Sobic001G020200--Sobic007G122500 Sobic001G020200--Sobic009G161700 Sobic001G020200--Sobic009G182500 Sobic009G173300 Sobic009G173300 Sobic001G020200--Sobic009G173300 Sobic003G361100 Sobic003G361100 Sobic001G020200--Sobic003G361100 Sobic003G353800 Sobic003G353800 Sobic001G020200--Sobic003G353800 Sobic003G268700 Sobic003G268700 Sobic001G020200--Sobic003G268700 Sobic004G338200--Sobic001G020200 Sobic004G243000 Sobic004G243000 Sobic004G338200--Sobic004G243000 Sobic004G338200--Sobic003G314200 Sobic007G227500 Sobic007G227500 Sobic004G338200--Sobic007G227500 Sobic008G040800 Sobic008G040800 Sobic004G338200--Sobic008G040800 Sobic004G338200--Sobic009G182500 Sobic003G268800 Sobic003G268800 Sobic004G338200--Sobic003G268800 Sobic004G338200--Sobic009G161700 Sobic006G094800 Sobic006G094800 Sobic004G338200--Sobic006G094800 Sobic009G182500--Sobic004G338200 Sobic009G182500--Sobic001G020200 Sobic009G182500--Sobic008G040800 Sobic009G182500--Sobic009G161700 Sobic009G182500--Sobic003G314200 Sobic003G077800 Sobic003G077800 Sobic009G182500--Sobic003G077800 Sobic008G191200 Sobic008G191200 Sobic009G182500--Sobic008G191200 Sobic009G182500--Sobic004G176950 Sobic010G132100 Sobic010G132100 Sobic009G182500--Sobic010G132100 Sobic003G314200--Sobic008G040800 Sobic006G205800 Sobic006G205800 Sobic003G314200--Sobic006G205800 Sobic003G314200--Sobic006G094800 Sobic001G148000 Sobic001G148000 Sobic003G314200--Sobic001G148000 Sobic003G226600 Sobic003G226600 Sobic003G314200--Sobic003G226600 Sobic009G027200 Sobic009G027200 Sobic003G314200--Sobic009G027200 Sobic001G207301 Sobic001G207301 Sobic003G314200--Sobic001G207301 Sobic001G501701 Sobic001G501701 Sobic003G314200--Sobic001G501701 Sobic003G314200--Sobic004G338200 Sobic003G354050--Sobic001G234733 Sobic002G423901 Sobic002G423901 Sobic003G354050--Sobic002G423901 Sobic002G014900 Sobic002G014900 Sobic003G354050--Sobic002G014900 Sobic003G168350 Sobic003G168350 Sobic003G354050--Sobic003G168350 Sobic007G223250 Sobic007G223250 Sobic003G354050--Sobic007G223250 Sobic004G087000 Sobic004G087000 Sobic003G354050--Sobic004G087000 Sobic004G198701 Sobic004G198701 Sobic003G354050--Sobic004G198701 Sobic008G157700 Sobic008G157700 Sobic003G354050--Sobic008G157700 Sobic001G138100 Sobic001G138100 Sobic003G354050--Sobic001G138100 Sobic002G245700 Sobic002G245700 Sobic004G176950--Sobic002G245700 Sobic002G413100 Sobic002G413100 Sobic004G176950--Sobic002G413100 Sobic004G176950--Sobic001G148000 Sobic010G268500 Sobic010G268500 Sobic004G176950--Sobic010G268500 Sobic003G053100 Sobic003G053100 Sobic004G176950--Sobic003G053100 Sobic001G413300 Sobic001G413300 Sobic004G176950--Sobic001G413300 Sobic003G208200 Sobic003G208200 Sobic004G176950--Sobic003G208200 Sobic007G199901 Sobic007G199901 Sobic004G176950--Sobic007G199901 Sobic003G117850 Sobic003G117850 Sobic004G176950--Sobic003G117850 Sobic001G073800 Sobic001G073800 Sobic003G365500--Sobic001G073800 Sobic001G350400 Sobic001G350400 Sobic003G365500--Sobic001G350400 Sobic002G394433 Sobic002G394433 Sobic003G365500--Sobic002G394433 Sobic006G020350 Sobic006G020350 Sobic003G365500--Sobic006G020350 Sobic008G139100 Sobic008G139100 Sobic003G365500--Sobic008G139100 Sobic002G288800 Sobic002G288800 Sobic003G365500--Sobic002G288800 Sobic005G183450 Sobic005G183450 Sobic003G365500--Sobic005G183450 Sobic001G365332 Sobic001G365332 Sobic003G365500--Sobic001G365332 Sobic003G365500--Sobic003G168350 Sobic001G234733--Sobic004G198701 Sobic001G234733--Sobic003G354050 Sobic002G277000 Sobic002G277000 Sobic001G234733--Sobic002G277000 Sobic001G059150 Sobic001G059150 Sobic001G234733--Sobic001G059150 Sobic001G234733--Sobic002G423901 Sobic003G200400 Sobic003G200400 Sobic001G234733--Sobic003G200400 Sobic003G159300 Sobic003G159300 Sobic001G234733--Sobic003G159300 Sobic003G277550 Sobic003G277550 Sobic001G234733--Sobic003G277550 Sobic001G234733--Sobic003G168350 Sobic003G393500 Sobic003G393500 Sobic001G423600--Sobic003G393500 Sobic004G138400 Sobic004G138400 Sobic001G423600--Sobic004G138400 Sobic003G393400 Sobic003G393400 Sobic001G423600--Sobic003G393400 Sobic001G423600--Sobic009G161700 Sobic001G476100 Sobic001G476100 Sobic001G423600--Sobic001G476100 Sobic001G321700 Sobic001G321700 Sobic001G423600--Sobic001G321700 Sobic001G423600--Sobic004G338200 Sobic007G181900 Sobic007G181900 Sobic001G423600--Sobic007G181900 Sobic001G330925 Sobic001G330925 Sobic001G423600--Sobic001G330925
Octagon: transcription factors


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