Gene annotation
Transcriptome id Sobic.002G406000.2
Synonym Sb02g042013
Functional annotation expressed protein
UniProt A0A1W0W7V3
Pfam PF02721 PF08646
Panther DB PTHR23273 PTHR23273:SF9
NCBI CDD -
KEGG Orthology K07466; RFA1, RPA1, replication factor A1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G52950 : Nucleic acid-binding, OB-fold-like protein
RAP-DB (Rice) LOC_Os03g08400.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277550 - -
2 Sobic.002G427600 hypothetical protein -
3 Sobic.007G212250 - -
4 Sobic.001G382332 - -
5 Sobic.007G220033 - -
6 Sobic.003G159300 - -
7 Sobic.004G201000 phytosulfokine receptor precursor, putative, expressed -
8 Sobic.003G125751 - -
9 Sobic.010G155401 - -
10 Sobic.004G290850 - -
11 Sobic.004G065950 - -
12 Sobic.010G126700 expressed protein -
13 Sobic.001G234733 - -
14 Sobic.010G023650 - -
15 Sobic.002G277000 - -
16 Sobic.001G273875 - -
17 Sobic.006G190150 - -
18 Sobic.001G448900 OsFBX210 - F-box domain containing protein, expressed -
19 Sobic.003G354050 - -
20 Sobic.006G011450 - -


Gene co-expression network
sample Sobic002G406000 Sobic002G406000 Sobic003G277550 Sobic003G277550 Sobic002G406000--Sobic003G277550 Sobic002G427600 Sobic002G427600 Sobic002G406000--Sobic002G427600 Sobic007G212250 Sobic007G212250 Sobic002G406000--Sobic007G212250 Sobic001G382332 Sobic001G382332 Sobic002G406000--Sobic001G382332 Sobic007G220033 Sobic007G220033 Sobic002G406000--Sobic007G220033 Sobic003G159300 Sobic003G159300 Sobic002G406000--Sobic003G159300 Sobic004G201000 Sobic004G201000 Sobic002G406000--Sobic004G201000 Sobic003G125751 Sobic003G125751 Sobic002G406000--Sobic003G125751 Sobic010G155401 Sobic010G155401 Sobic002G406000--Sobic010G155401 Sobic003G277550--Sobic002G427600 Sobic003G277550--Sobic007G212250 Sobic003G277550--Sobic001G382332 Sobic003G277550--Sobic002G406000 Sobic003G277550--Sobic003G159300 Sobic003G277550--Sobic007G220033 Sobic001G234733 Sobic001G234733 Sobic003G277550--Sobic001G234733 Sobic004G290850 Sobic004G290850 Sobic003G277550--Sobic004G290850 Sobic003G277550--Sobic003G125751 Sobic002G427600--Sobic003G277550 Sobic002G427600--Sobic007G212250 Sobic002G427600--Sobic007G220033 Sobic002G427600--Sobic004G201000 Sobic002G427600--Sobic004G290850 Sobic002G427600--Sobic010G155401 Sobic002G427600--Sobic003G125751 Sobic004G065950 Sobic004G065950 Sobic002G427600--Sobic004G065950 Sobic002G427600--Sobic002G406000 Sobic007G212250--Sobic002G427600 Sobic007G212250--Sobic003G277550 Sobic007G212250--Sobic007G220033 Sobic007G212250--Sobic004G201000 Sobic007G212250--Sobic002G406000 Sobic007G212250--Sobic010G155401 Sobic007G212250--Sobic003G125751 Sobic007G212250--Sobic004G290850 Sobic007G212250--Sobic001G382332 Sobic001G382332--Sobic003G277550 Sobic001G382332--Sobic002G427600 Sobic001G382332--Sobic007G212250 Sobic001G382332--Sobic002G406000 Sobic001G382332--Sobic007G220033 Sobic001G382332--Sobic003G159300 Sobic001G382332--Sobic004G201000 Sobic001G382332--Sobic003G125751 Sobic001G382332--Sobic004G290850 Sobic007G220033--Sobic002G427600 Sobic007G220033--Sobic004G201000 Sobic007G220033--Sobic010G155401 Sobic007G220033--Sobic003G125751 Sobic007G220033--Sobic004G065950 Sobic007G220033--Sobic004G290850 Sobic010G023650 Sobic010G023650 Sobic007G220033--Sobic010G023650 Sobic007G220033--Sobic003G277550 Sobic007G220033--Sobic007G212250 Sobic003G159300--Sobic003G277550 Sobic003G159300--Sobic002G427600 Sobic003G159300--Sobic001G234733 Sobic003G159300--Sobic007G212250 Sobic003G354050 Sobic003G354050 Sobic003G159300--Sobic003G354050 Sobic003G159300--Sobic001G382332 Sobic003G159300--Sobic002G406000 Sobic003G159300--Sobic007G220033 Sobic003G159300--Sobic003G125751 Sobic004G201000--Sobic010G155401 Sobic004G201000--Sobic004G065950 Sobic001G273875 Sobic001G273875 Sobic004G201000--Sobic001G273875 Sobic004G201000--Sobic003G125751 Sobic004G201000--Sobic004G290850 Sobic004G201000--Sobic002G427600 Sobic006G011450 Sobic006G011450 Sobic004G201000--Sobic006G011450 Sobic004G201000--Sobic007G220033 Sobic004G201000--Sobic010G023650 Sobic003G125751--Sobic004G201000 Sobic003G125751--Sobic010G155401 Sobic003G125751--Sobic004G065950 Sobic003G125751--Sobic004G290850 Sobic003G125751--Sobic001G273875 Sobic003G125751--Sobic002G427600 Sobic003G125751--Sobic007G220033 Sobic003G125751--Sobic006G011450 Sobic003G125751--Sobic010G023650 Sobic010G155401--Sobic004G201000 Sobic010G155401--Sobic004G065950 Sobic010G155401--Sobic001G273875 Sobic010G155401--Sobic003G125751 Sobic010G155401--Sobic004G290850 Sobic010G155401--Sobic002G427600 Sobic010G155401--Sobic006G011450 Sobic010G155401--Sobic007G220033 Sobic010G155401--Sobic010G023650
Octagon: transcription factors


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