Gene annotation
Transcriptome id Sobic.001G020200.1
Synonym STOP1
Functional annotation ZOS3-24 - C2H2 zinc finger protein, expressed
UniProt A0A1B6QH06
Pfam -
Panther DB PTHR10593 PTHR10593:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34370 : C2H2 and C2HC zinc fingers superfamily protein
RAP-DB (Rice) LOC_Os03g62230.1 : ZOS3-24 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a008961
Brachypodium KQJ94673
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G338200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsWAK24 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.004G216900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.007G122500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.009G161700 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@COX VIIa, putative, expressed -
5 Sobic.009G182500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.009G173300 spotted leaf 11, putative, expressed -
7 Sobic.003G361100 hs1, putative, expressed -
8 Sobic.003G353800 avr9/Cf-9 rapidly elicited protein, putative, expressed -
9 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
10 Sobic.001G035000 ZOS3-22 - C2H2 zinc finger protein, expressed -
11 Sobic.004G032300 OsSGL(Ortholog in rice:Wang et al. (2016))(PubMedID : 31659876)@DUF1645 domain containing protein, putative, expressed -
12 Sobic.004G243000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@metalloendoproteinase 1 precursor, putative, expressed -
13 Sobic.003G314200 TKL_IRAK_DUF26-lc.7 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.007G077200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
15 Sobic.006G273800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
16 Sobic.005G037000 cytochrome P450, putative, expressed -
17 Sobic.010G272000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leucine zipper protein-like, putative, expressed -
18 Sobic.006G274300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.001G406300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.001G192800 AAA-type ATPase family protein, putative, expressed -


Gene co-expression network
sample Sobic001G020200 Sobic001G020200 Sobic004G338200 Sobic004G338200 Sobic001G020200--Sobic004G338200 Sobic004G216900 Sobic004G216900 Sobic001G020200--Sobic004G216900 Sobic007G122500 Sobic007G122500 Sobic001G020200--Sobic007G122500 Sobic009G161700 Sobic009G161700 Sobic001G020200--Sobic009G161700 Sobic009G182500 Sobic009G182500 Sobic001G020200--Sobic009G182500 Sobic009G173300 Sobic009G173300 Sobic001G020200--Sobic009G173300 Sobic003G361100 Sobic003G361100 Sobic001G020200--Sobic003G361100 Sobic003G353800 Sobic003G353800 Sobic001G020200--Sobic003G353800 Sobic003G268700 Sobic003G268700 Sobic001G020200--Sobic003G268700 Sobic004G338200--Sobic001G020200 Sobic004G243000 Sobic004G243000 Sobic004G338200--Sobic004G243000 Sobic003G314200 Sobic003G314200 Sobic004G338200--Sobic003G314200 Sobic007G227500 Sobic007G227500 Sobic004G338200--Sobic007G227500 Sobic008G040800 Sobic008G040800 Sobic004G338200--Sobic008G040800 Sobic004G338200--Sobic009G182500 Sobic003G268800 Sobic003G268800 Sobic004G338200--Sobic003G268800 Sobic004G338200--Sobic009G161700 Sobic006G094800 Sobic006G094800 Sobic004G338200--Sobic006G094800 Sobic004G216900--Sobic007G122500 Sobic001G035000 Sobic001G035000 Sobic004G216900--Sobic001G035000 Sobic005G037000 Sobic005G037000 Sobic004G216900--Sobic005G037000 Sobic007G126300 Sobic007G126300 Sobic004G216900--Sobic007G126300 Sobic004G032300 Sobic004G032300 Sobic004G216900--Sobic004G032300 Sobic001G077400 Sobic001G077400 Sobic004G216900--Sobic001G077400 Sobic001G209800 Sobic001G209800 Sobic004G216900--Sobic001G209800 Sobic001G441100 Sobic001G441100 Sobic004G216900--Sobic001G441100 Sobic006G274300 Sobic006G274300 Sobic004G216900--Sobic006G274300 Sobic007G122500--Sobic001G035000 Sobic007G122500--Sobic001G441100 Sobic007G122500--Sobic005G037000 Sobic007G122500--Sobic004G032300 Sobic009G120800 Sobic009G120800 Sobic007G122500--Sobic009G120800 Sobic002G225700 Sobic002G225700 Sobic007G122500--Sobic002G225700 Sobic007G122500--Sobic007G126300 Sobic006G187900 Sobic006G187900 Sobic007G122500--Sobic006G187900 Sobic009G217600 Sobic009G217600 Sobic007G122500--Sobic009G217600 Sobic009G161700--Sobic001G020200 Sobic009G161700--Sobic004G338200 Sobic009G161700--Sobic009G182500 Sobic009G161700--Sobic003G314200 Sobic003G354050 Sobic003G354050 Sobic009G161700--Sobic003G354050 Sobic004G176950 Sobic004G176950 Sobic009G161700--Sobic004G176950 Sobic003G365500 Sobic003G365500 Sobic009G161700--Sobic003G365500 Sobic001G234733 Sobic001G234733 Sobic009G161700--Sobic001G234733 Sobic001G423600 Sobic001G423600 Sobic009G161700--Sobic001G423600 Sobic009G182500--Sobic004G338200 Sobic009G182500--Sobic001G020200 Sobic009G182500--Sobic008G040800 Sobic009G182500--Sobic009G161700 Sobic009G182500--Sobic003G314200 Sobic003G077800 Sobic003G077800 Sobic009G182500--Sobic003G077800 Sobic008G191200 Sobic008G191200 Sobic009G182500--Sobic008G191200 Sobic009G182500--Sobic004G176950 Sobic010G132100 Sobic010G132100 Sobic009G182500--Sobic010G132100 Sobic008G150400 Sobic008G150400 Sobic009G173300--Sobic008G150400 Sobic006G216500 Sobic006G216500 Sobic009G173300--Sobic006G216500 Sobic009G173300--Sobic001G020200 Sobic006G184400 Sobic006G184400 Sobic009G173300--Sobic006G184400 Sobic004G305000 Sobic004G305000 Sobic009G173300--Sobic004G305000 Sobic009G028300 Sobic009G028300 Sobic009G173300--Sobic009G028300 Sobic009G173300--Sobic004G338200 Sobic002G278400 Sobic002G278400 Sobic009G173300--Sobic002G278400 Sobic010G086400 Sobic010G086400 Sobic009G173300--Sobic010G086400 Sobic003G361100--Sobic001G035000 Sobic001G192800 Sobic001G192800 Sobic003G361100--Sobic001G192800 Sobic009G204100 Sobic009G204100 Sobic003G361100--Sobic009G204100 Sobic003G361100--Sobic009G217600 Sobic003G361100--Sobic001G441100 Sobic003G361100--Sobic003G353800 Sobic003G361100--Sobic006G184400 Sobic003G361100--Sobic005G037000 Sobic003G361100--Sobic001G209800 Sobic003G353800--Sobic009G217600 Sobic001G341600 Sobic001G341600 Sobic003G353800--Sobic001G341600 Sobic003G353800--Sobic001G441100 Sobic003G353800--Sobic001G035000 Sobic002G278500 Sobic002G278500 Sobic003G353800--Sobic002G278500 Sobic003G353800--Sobic001G077400 Sobic009G217500 Sobic009G217500 Sobic003G353800--Sobic009G217500 Sobic008G042900 Sobic008G042900 Sobic003G353800--Sobic008G042900 Sobic003G416500 Sobic003G416500 Sobic003G353800--Sobic003G416500 Sobic009G071800 Sobic009G071800 Sobic003G268700--Sobic009G071800 Sobic008G036000 Sobic008G036000 Sobic003G268700--Sobic008G036000 Sobic003G012800 Sobic003G012800 Sobic003G268700--Sobic003G012800 Sobic009G167000 Sobic009G167000 Sobic003G268700--Sobic009G167000 Sobic003G268700--Sobic001G209800 Sobic001G473900 Sobic001G473900 Sobic003G268700--Sobic001G473900 Sobic002G217100 Sobic002G217100 Sobic003G268700--Sobic002G217100 Sobic010G076600 Sobic010G076600 Sobic003G268700--Sobic010G076600 Sobic001G077700 Sobic001G077700 Sobic003G268700--Sobic001G077700
Octagon: transcription factors


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