Gene annotation
Transcriptome id Sobic.010G272000.5,Sobic.010G272000.3,Sobic.010G272000.2,Sobic.010G272000.4
Synonym Sb10g030660
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
leucine zipper protein-like, putative, expressed
UniProt A0A194YLS3
Pfam PF03081
Panther DB PTHR12542 PTHR12542:SF40
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006887; exocytosis GO:0000145exocyst


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g17810.1 : leucine zipper protein-like, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
2 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
3 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
4 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
5 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
6 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
7 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
8 Sobic.002G344700 remorin, putative, expressed -
9 Sobic.010G023300 expressed protein -
10 Sobic.006G216500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G283300 AP2 domain containing protein, expressed -
12 Sobic.007G145700 expressed protein -
13 Sobic.003G268700 STE_MEKK_ste11_MAP3K.4 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
14 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
15 Sobic.002G197600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@TKL_IRAK_DUF26-lg.2 - DUF26 kinases have homology to DUF26 containing loci, expressed -
16 Sobic.002G118600 SNARE domain containing protein, putative, expressed K18211: synaptosomal-associated protein 25
17 Sobic.003G158600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@abscisic stress-ripening, putative, expressed -
18 Sobic.008G036000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
19 Sobic.002G021300 bZIP transcription factor domain containing protein, expressed -
20 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -


Gene co-expression network
sample Sobic010G272000 Sobic010G272000 Sobic001G081600 Sobic001G081600 Sobic010G272000--Sobic001G081600 Sobic001G462800 Sobic001G462800 Sobic010G272000--Sobic001G462800 Sobic002G217100 Sobic002G217100 Sobic010G272000--Sobic002G217100 Sobic008G059000 Sobic008G059000 Sobic010G272000--Sobic008G059000 Sobic004G281200 Sobic004G281200 Sobic010G272000--Sobic004G281200 Sobic002G294600 Sobic002G294600 Sobic010G272000--Sobic002G294600 Sobic006G210300 Sobic006G210300 Sobic010G272000--Sobic006G210300 Sobic002G344700 Sobic002G344700 Sobic010G272000--Sobic002G344700 Sobic010G023300 Sobic010G023300 Sobic010G272000--Sobic010G023300 Sobic001G081600--Sobic001G462800 Sobic001G081600--Sobic002G217100 Sobic001G081600--Sobic006G210300 Sobic004G283300 Sobic004G283300 Sobic001G081600--Sobic004G283300 Sobic002G197600 Sobic002G197600 Sobic001G081600--Sobic002G197600 Sobic001G081600--Sobic004G281200 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic001G081600--Sobic001G476400 Sobic001G462800--Sobic001G081600 Sobic001G462800--Sobic002G217100 Sobic001G462800--Sobic002G294600 Sobic001G462800--Sobic002G197600 Sobic001G462800--Sobic002G344700 Sobic002G367900 Sobic002G367900 Sobic001G462800--Sobic002G367900 Sobic001G462800--Sobic006G210300 Sobic007G145700 Sobic007G145700 Sobic001G462800--Sobic007G145700 Sobic001G462800--Sobic004G281200 Sobic002G217100--Sobic006G210300 Sobic002G217100--Sobic001G081600 Sobic002G217100--Sobic001G462800 Sobic002G217100--Sobic004G281200 Sobic002G217100--Sobic002G197600 Sobic010G016500 Sobic010G016500 Sobic002G217100--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic002G217100--Sobic004G244300 Sobic009G167000 Sobic009G167000 Sobic002G217100--Sobic009G167000 Sobic004G244100 Sobic004G244100 Sobic002G217100--Sobic004G244100 Sobic008G059000--Sobic004G281200 Sobic008G058900 Sobic008G058900 Sobic008G059000--Sobic008G058900 Sobic002G021300 Sobic002G021300 Sobic008G059000--Sobic002G021300 Sobic003G087100 Sobic003G087100 Sobic008G059000--Sobic003G087100 Sobic006G194600 Sobic006G194600 Sobic008G059000--Sobic006G194600 Sobic008G059000--Sobic009G167000 Sobic008G059000--Sobic004G244100 Sobic009G076500 Sobic009G076500 Sobic008G059000--Sobic009G076500 Sobic008G059000--Sobic010G016500 Sobic004G281200--Sobic010G016500 Sobic004G281200--Sobic004G244300 Sobic004G281200--Sobic008G059000 Sobic004G281200--Sobic006G194600 Sobic006G203000 Sobic006G203000 Sobic004G281200--Sobic006G203000 Sobic004G281200--Sobic002G217100 Sobic004G281200--Sobic006G210300 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100 Sobic002G294600--Sobic007G145700 Sobic002G294600--Sobic001G462800 Sobic001G095700 Sobic001G095700 Sobic002G294600--Sobic001G095700 Sobic002G294600--Sobic002G367900 Sobic004G065900 Sobic004G065900 Sobic002G294600--Sobic004G065900 Sobic002G294600--Sobic002G217100 Sobic003G341100 Sobic003G341100 Sobic002G294600--Sobic003G341100 Sobic006G146500 Sobic006G146500 Sobic002G294600--Sobic006G146500 Sobic001G118900 Sobic001G118900 Sobic002G294600--Sobic001G118900 Sobic006G210300--Sobic002G217100 Sobic006G210300--Sobic004G281200 Sobic006G210300--Sobic001G081600 Sobic006G210300--Sobic002G197600 Sobic006G210300--Sobic001G462800 Sobic006G210300--Sobic002G367900 Sobic006G210300--Sobic010G016500 Sobic006G210300--Sobic004G244100 Sobic006G184400 Sobic006G184400 Sobic006G210300--Sobic006G184400 Sobic002G344700--Sobic004G283300 Sobic002G344700--Sobic001G081600 Sobic002G344700--Sobic001G462800 Sobic006G032200 Sobic006G032200 Sobic002G344700--Sobic006G032200 Sobic002G344700--Sobic004G025000 Sobic009G170100 Sobic009G170100 Sobic002G344700--Sobic009G170100 Sobic002G344700--Sobic004G281200 Sobic002G344700--Sobic006G210300 Sobic002G344700--Sobic002G217100 Sobic010G023300--Sobic010G272000 Sobic010G023300--Sobic006G210300 Sobic010G023300--Sobic004G281200 Sobic010G023300--Sobic010G016500 Sobic001G406300 Sobic001G406300 Sobic010G023300--Sobic001G406300 Sobic010G023300--Sobic001G081600 Sobic010G023300--Sobic002G217100 Sobic007G143400 Sobic007G143400 Sobic010G023300--Sobic007G143400 Sobic010G023300--Sobic004G283300
Octagon: transcription factors


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