Gene annotation
Transcriptome id Sobic.010G023300.1
Synonym Sb10g002180
Functional annotation expressed protein
UniProt Q5NKS1
Pfam -
Panther DB PTHR33641 PTHR33641:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g04240.1 : expressed protein
MaizeGDB (Corn) Zm00025a050147
Brachypodium KQK19737
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G272000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@leucine zipper protein-like, putative, expressed -
2 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.004G281200 chitin-inducible gibberellin-responsive protein 2, putative, expressed -
4 Sobic.010G016500 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@ Relatively high abundance in cold tolerant sorghum under cold stress(PubMedID : 26645959)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@key regulator in cold signaling pathway (Arabidopsis)(PubMedID : 16244905)@dehydration-responsive element-binding protein, putative, expressed -
5 Sobic.001G406300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
6 Sobic.001G081600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
7 Sobic.002G217100 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.007G143400 tetraspanin family protein, putative, expressed -
9 Sobic.004G283300 AP2 domain containing protein, expressed -
10 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
11 Sobic.008G059000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
12 Sobic.004G244300 formin-like protein 3 precursor, putative, expressed -
13 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
14 Sobic.004G283201 - -
15 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
16 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
17 Sobic.002G185200 VQ domain containing protein, putative, expressed -
18 Sobic.002G189000 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
19 Sobic.006G216500 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G110200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic010G023300 Sobic010G023300 Sobic010G272000 Sobic010G272000 Sobic010G023300--Sobic010G272000 Sobic006G210300 Sobic006G210300 Sobic010G023300--Sobic006G210300 Sobic004G281200 Sobic004G281200 Sobic010G023300--Sobic004G281200 Sobic010G016500 Sobic010G016500 Sobic010G023300--Sobic010G016500 Sobic001G406300 Sobic001G406300 Sobic010G023300--Sobic001G406300 Sobic001G081600 Sobic001G081600 Sobic010G023300--Sobic001G081600 Sobic002G217100 Sobic002G217100 Sobic010G023300--Sobic002G217100 Sobic007G143400 Sobic007G143400 Sobic010G023300--Sobic007G143400 Sobic004G283300 Sobic004G283300 Sobic010G023300--Sobic004G283300 Sobic010G272000--Sobic001G081600 Sobic001G462800 Sobic001G462800 Sobic010G272000--Sobic001G462800 Sobic010G272000--Sobic002G217100 Sobic008G059000 Sobic008G059000 Sobic010G272000--Sobic008G059000 Sobic010G272000--Sobic004G281200 Sobic002G294600 Sobic002G294600 Sobic010G272000--Sobic002G294600 Sobic010G272000--Sobic006G210300 Sobic002G344700 Sobic002G344700 Sobic010G272000--Sobic002G344700 Sobic010G272000--Sobic010G023300 Sobic006G210300--Sobic002G217100 Sobic006G210300--Sobic004G281200 Sobic006G210300--Sobic001G081600 Sobic002G197600 Sobic002G197600 Sobic006G210300--Sobic002G197600 Sobic006G210300--Sobic001G462800 Sobic002G367900 Sobic002G367900 Sobic006G210300--Sobic002G367900 Sobic006G210300--Sobic010G016500 Sobic004G244100 Sobic004G244100 Sobic006G210300--Sobic004G244100 Sobic006G184400 Sobic006G184400 Sobic006G210300--Sobic006G184400 Sobic004G281200--Sobic010G016500 Sobic004G244300 Sobic004G244300 Sobic004G281200--Sobic004G244300 Sobic004G281200--Sobic008G059000 Sobic006G194600 Sobic006G194600 Sobic004G281200--Sobic006G194600 Sobic006G203000 Sobic006G203000 Sobic004G281200--Sobic006G203000 Sobic004G281200--Sobic002G217100 Sobic004G281200--Sobic006G210300 Sobic004G281200--Sobic001G081600 Sobic004G281200--Sobic004G244100 Sobic010G016500--Sobic004G281200 Sobic010G016500--Sobic004G244300 Sobic010G016500--Sobic006G194600 Sobic010G016500--Sobic006G203000 Sobic010G016500--Sobic004G283300 Sobic010G016500--Sobic002G217100 Sobic010G016500--Sobic004G244100 Sobic010G016500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic010G016500--Sobic002G182800 Sobic001G406300--Sobic010G023300 Sobic001G406300--Sobic002G294600 Sobic004G065900 Sobic004G065900 Sobic001G406300--Sobic004G065900 Sobic002G185200 Sobic002G185200 Sobic001G406300--Sobic002G185200 Sobic007G051800 Sobic007G051800 Sobic001G406300--Sobic007G051800 Sobic001G095700 Sobic001G095700 Sobic001G406300--Sobic001G095700 Sobic009G157100 Sobic009G157100 Sobic001G406300--Sobic009G157100 Sobic001G406300--Sobic007G143400 Sobic001G406300--Sobic006G210300 Sobic001G081600--Sobic001G462800 Sobic001G081600--Sobic002G217100 Sobic001G081600--Sobic006G210300 Sobic001G081600--Sobic004G283300 Sobic001G081600--Sobic002G197600 Sobic001G081600--Sobic004G281200 Sobic001G081600--Sobic002G344700 Sobic004G025000 Sobic004G025000 Sobic001G081600--Sobic004G025000 Sobic001G476400 Sobic001G476400 Sobic001G081600--Sobic001G476400 Sobic002G217100--Sobic006G210300 Sobic002G217100--Sobic001G081600 Sobic002G217100--Sobic001G462800 Sobic002G217100--Sobic004G281200 Sobic002G217100--Sobic002G197600 Sobic002G217100--Sobic010G016500 Sobic002G217100--Sobic004G244300 Sobic009G167000 Sobic009G167000 Sobic002G217100--Sobic009G167000 Sobic002G217100--Sobic004G244100 Sobic002G341900 Sobic002G341900 Sobic007G143400--Sobic002G341900 Sobic007G143400--Sobic001G095700 Sobic007G143400--Sobic002G294600 Sobic007G143400--Sobic002G217100 Sobic007G143400--Sobic001G462800 Sobic003G268900 Sobic003G268900 Sobic007G143400--Sobic003G268900 Sobic007G143400--Sobic002G367900 Sobic007G143400--Sobic006G210300 Sobic007G143400--Sobic004G065900 Sobic004G283300--Sobic002G344700 Sobic004G283300--Sobic010G016500 Sobic004G283300--Sobic001G081600 Sobic004G283201 Sobic004G283201 Sobic004G283300--Sobic004G283201 Sobic009G170100 Sobic009G170100 Sobic004G283300--Sobic009G170100 Sobic006G032200 Sobic006G032200 Sobic004G283300--Sobic006G032200 Sobic004G283300--Sobic004G281200 Sobic004G283300--Sobic001G476400 Sobic004G283300--Sobic006G210300
Octagon: transcription factors


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