Gene annotation
Transcriptome id Sobic.002G185200.2,Sobic.002G185200.3
Synonym Sb02g023320
Functional annotation VQ domain containing protein, putative, expressed
UniProt A0A1B6QC85
Pfam PF05678
Panther DB PTHR33179:SF4 PTHR33179
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G35830 : VQ motif-containing protein
RAP-DB (Rice) LOC_Os09g20460.1 : VQ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a031020 , Zm00025a019105 , Zm00025a046724 , Zm00025a052086 , Zm00025a013820 , Zm00025a048807
Brachypodium KQJ98225 , KQK21459 , KQJ93567 , KQJ90035
Barley HORVU3Hr1G003880.1 , HORVU3Hr1G003880.2 , HORVU5Hr1G058170.1
Wheat TraesCS3D02G036600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G006500 expressed protein -
2 Sobic.002G418900 expressed protein -
3 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
5 Sobic.001G118900 DUF292 domain containing protein, expressed -
6 Sobic.006G146500 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
7 Sobic.007G143400 tetraspanin family protein, putative, expressed -
8 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
9 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
11 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
12 Sobic.001G095750 - -
13 Sobic.004G187800 RING-H2 finger protein ATL1O, putative, expressed -
14 Sobic.002G401600 glycosyltransferase, putative, expressed -
15 Sobic.005G087800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
16 Sobic.002G341900 - -
17 Sobic.009G028500 zinc finger family protein, putative, expressed -
18 Sobic.001G406300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
19 Sobic.001G314300 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
20 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -


Gene co-expression network
sample Sobic002G185200 Sobic002G185200 Sobic004G006500 Sobic004G006500 Sobic002G185200--Sobic004G006500 Sobic002G418900 Sobic002G418900 Sobic002G185200--Sobic002G418900 Sobic002G294600 Sobic002G294600 Sobic002G185200--Sobic002G294600 Sobic004G065900 Sobic004G065900 Sobic002G185200--Sobic004G065900 Sobic001G118900 Sobic001G118900 Sobic002G185200--Sobic001G118900 Sobic006G146500 Sobic006G146500 Sobic002G185200--Sobic006G146500 Sobic007G143400 Sobic007G143400 Sobic002G185200--Sobic007G143400 Sobic006G114200 Sobic006G114200 Sobic002G185200--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic002G185200--Sobic004G086800 Sobic004G006500--Sobic002G185200 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic009G028500 Sobic009G028500 Sobic004G006500--Sobic009G028500 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic004G006500--Sobic006G114200 Sobic004G006500--Sobic004G086800 Sobic002G418900--Sobic004G006500 Sobic002G418900--Sobic002G185200 Sobic002G418900--Sobic001G118900 Sobic002G418900--Sobic004G065900 Sobic002G418900--Sobic009G028500 Sobic002G367900 Sobic002G367900 Sobic002G418900--Sobic002G367900 Sobic002G207300 Sobic002G207300 Sobic002G418900--Sobic002G207300 Sobic002G418900--Sobic007G143400 Sobic001G131200 Sobic001G131200 Sobic002G418900--Sobic001G131200 Sobic007G145700 Sobic007G145700 Sobic002G294600--Sobic007G145700 Sobic001G462800 Sobic001G462800 Sobic002G294600--Sobic001G462800 Sobic001G095700 Sobic001G095700 Sobic002G294600--Sobic001G095700 Sobic002G294600--Sobic002G367900 Sobic002G294600--Sobic004G065900 Sobic002G217100 Sobic002G217100 Sobic002G294600--Sobic002G217100 Sobic003G341100 Sobic003G341100 Sobic002G294600--Sobic003G341100 Sobic002G294600--Sobic006G146500 Sobic002G294600--Sobic001G118900 Sobic004G065900--Sobic002G207300 Sobic004G065900--Sobic001G095700 Sobic004G065900--Sobic002G367900 Sobic004G065900--Sobic001G118900 Sobic004G065900--Sobic002G294600 Sobic004G065900--Sobic006G146500 Sobic007G201100 Sobic007G201100 Sobic004G065900--Sobic007G201100 Sobic004G065900--Sobic007G145700 Sobic004G065900--Sobic009G010400 Sobic001G118900--Sobic004G065900 Sobic001G161200 Sobic001G161200 Sobic001G118900--Sobic001G161200 Sobic001G118900--Sobic002G367900 Sobic001G118900--Sobic002G207300 Sobic001G118900--Sobic004G006500 Sobic001G118900--Sobic002G294600 Sobic001G118900--Sobic002G418900 Sobic001G095750 Sobic001G095750 Sobic001G118900--Sobic001G095750 Sobic001G118900--Sobic001G462800 Sobic003G425200 Sobic003G425200 Sobic006G146500--Sobic003G425200 Sobic006G146500--Sobic004G065900 Sobic006G146500--Sobic007G145700 Sobic006G146500--Sobic003G341100 Sobic006G146500--Sobic002G207300 Sobic006G146500--Sobic002G294600 Sobic006G146500--Sobic007G201100 Sobic006G146500--Sobic002G367900 Sobic001G081600 Sobic001G081600 Sobic006G146500--Sobic001G081600 Sobic002G341900 Sobic002G341900 Sobic007G143400--Sobic002G341900 Sobic007G143400--Sobic001G095700 Sobic007G143400--Sobic002G294600 Sobic007G143400--Sobic002G217100 Sobic007G143400--Sobic001G462800 Sobic003G268900 Sobic003G268900 Sobic007G143400--Sobic003G268900 Sobic007G143400--Sobic002G367900 Sobic006G210300 Sobic006G210300 Sobic007G143400--Sobic006G210300 Sobic007G143400--Sobic004G065900 Sobic001G314300 Sobic001G314300 Sobic006G114200--Sobic001G314300 Sobic006G114200--Sobic001G095750 Sobic006G114200--Sobic004G006500 Sobic006G114200--Sobic002G185200 Sobic001G314700 Sobic001G314700 Sobic006G114200--Sobic001G314700 Sobic006G114200--Sobic001G118900 Sobic006G114200--Sobic002G195800 Sobic001G030600 Sobic001G030600 Sobic006G114200--Sobic001G030600 Sobic006G113800 Sobic006G113800 Sobic006G114200--Sobic006G113800 Sobic004G086800--Sobic009G010400 Sobic003G416500 Sobic003G416500 Sobic004G086800--Sobic003G416500 Sobic006G259000 Sobic006G259000 Sobic004G086800--Sobic006G259000 Sobic004G086800--Sobic004G065900 Sobic002G323900 Sobic002G323900 Sobic004G086800--Sobic002G323900 Sobic001G489500 Sobic001G489500 Sobic004G086800--Sobic001G489500 Sobic010G102000 Sobic010G102000 Sobic004G086800--Sobic010G102000 Sobic002G138700 Sobic002G138700 Sobic004G086800--Sobic002G138700 Sobic001G287600 Sobic001G287600 Sobic004G086800--Sobic001G287600
Octagon: transcription factors


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