Gene annotation
Transcriptome id Sobic.002G418900.1
Synonym Sb02g043060
Functional annotation expressed protein
UniProt A0A1B6QGA0
Pfam PF11331
Panther DB PTHR31105 PTHR31105:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46380 : Protein of unknown function (DUF3133)
RAP-DB (Rice) LOC_Os07g48280.1 : expressed protein
MaizeGDB (Corn) Zm00025a015448 , Zm00025a049171
Brachypodium KQK14621
Barley HORVU0Hr1G002410.2 , HORVU0Hr1G002410.1
Wheat TraesCS2B02G121600 , TraesCS2D02G104300 , TraesCS2A02G104600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G006500 expressed protein -
2 Sobic.002G185200 VQ domain containing protein, putative, expressed -
3 Sobic.001G118900 DUF292 domain containing protein, expressed -
4 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
5 Sobic.009G028500 zinc finger family protein, putative, expressed -
6 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
7 Sobic.002G207300 tetraspanin family protein, putative, expressed -
8 Sobic.007G143400 tetraspanin family protein, putative, expressed -
9 Sobic.001G131200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@PB1 domain containing protein, expressed -
10 Sobic.001G406300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
11 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
12 Sobic.004G187800 RING-H2 finger protein ATL1O, putative, expressed -
13 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
14 Sobic.009G212800 WRKY7, expressed -
15 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
16 Sobic.006G146500 NB-ARC/LRR disease resistance protein, putative, expressed K13459: disease resistance protein RPS2
17 Sobic.001G095750 - -
18 Sobic.006G210300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
19 Sobic.010G023300 expressed protein -
20 Sobic.003G131500 VQ domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G418900 Sobic002G418900 Sobic004G006500 Sobic004G006500 Sobic002G418900--Sobic004G006500 Sobic002G185200 Sobic002G185200 Sobic002G418900--Sobic002G185200 Sobic001G118900 Sobic001G118900 Sobic002G418900--Sobic001G118900 Sobic004G065900 Sobic004G065900 Sobic002G418900--Sobic004G065900 Sobic009G028500 Sobic009G028500 Sobic002G418900--Sobic009G028500 Sobic002G367900 Sobic002G367900 Sobic002G418900--Sobic002G367900 Sobic002G207300 Sobic002G207300 Sobic002G418900--Sobic002G207300 Sobic007G143400 Sobic007G143400 Sobic002G418900--Sobic007G143400 Sobic001G131200 Sobic001G131200 Sobic002G418900--Sobic001G131200 Sobic004G006500--Sobic002G185200 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic004G006500--Sobic009G028500 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic006G114200 Sobic006G114200 Sobic004G006500--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic004G006500--Sobic004G086800 Sobic002G185200--Sobic004G006500 Sobic002G185200--Sobic002G418900 Sobic002G294600 Sobic002G294600 Sobic002G185200--Sobic002G294600 Sobic002G185200--Sobic004G065900 Sobic002G185200--Sobic001G118900 Sobic006G146500 Sobic006G146500 Sobic002G185200--Sobic006G146500 Sobic002G185200--Sobic007G143400 Sobic002G185200--Sobic006G114200 Sobic002G185200--Sobic004G086800 Sobic001G118900--Sobic004G065900 Sobic001G161200 Sobic001G161200 Sobic001G118900--Sobic001G161200 Sobic001G118900--Sobic002G367900 Sobic001G118900--Sobic002G207300 Sobic001G118900--Sobic004G006500 Sobic001G118900--Sobic002G294600 Sobic001G118900--Sobic002G418900 Sobic001G095750 Sobic001G095750 Sobic001G118900--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic001G118900--Sobic001G462800 Sobic004G065900--Sobic002G207300 Sobic001G095700 Sobic001G095700 Sobic004G065900--Sobic001G095700 Sobic004G065900--Sobic002G367900 Sobic004G065900--Sobic001G118900 Sobic004G065900--Sobic002G294600 Sobic004G065900--Sobic006G146500 Sobic007G201100 Sobic007G201100 Sobic004G065900--Sobic007G201100 Sobic007G145700 Sobic007G145700 Sobic004G065900--Sobic007G145700 Sobic004G065900--Sobic009G010400 Sobic009G028500--Sobic004G065900 Sobic009G028500--Sobic004G006500 Sobic010G089700 Sobic010G089700 Sobic009G028500--Sobic010G089700 Sobic009G028500--Sobic002G418900 Sobic009G028500--Sobic002G207300 Sobic009G028500--Sobic002G367900 Sobic009G028500--Sobic001G118900 Sobic009G028500--Sobic009G010400 Sobic009G028500--Sobic002G185200 Sobic002G367900--Sobic002G207300 Sobic002G367900--Sobic004G065900 Sobic003G268900 Sobic003G268900 Sobic002G367900--Sobic003G268900 Sobic002G367900--Sobic001G095700 Sobic002G367900--Sobic001G462800 Sobic002G367900--Sobic002G294600 Sobic002G197600 Sobic002G197600 Sobic002G367900--Sobic002G197600 Sobic006G210300 Sobic006G210300 Sobic002G367900--Sobic006G210300 Sobic004G244100 Sobic004G244100 Sobic002G367900--Sobic004G244100 Sobic002G207300--Sobic004G065900 Sobic002G207300--Sobic002G367900 Sobic002G207300--Sobic007G201100 Sobic002G207300--Sobic006G146500 Sobic002G207300--Sobic001G118900 Sobic003G425200 Sobic003G425200 Sobic002G207300--Sobic003G425200 Sobic002G207300--Sobic002G294600 Sobic001G410100 Sobic001G410100 Sobic002G207300--Sobic001G410100 Sobic002G207300--Sobic001G095700 Sobic002G341900 Sobic002G341900 Sobic007G143400--Sobic002G341900 Sobic007G143400--Sobic001G095700 Sobic007G143400--Sobic002G294600 Sobic002G217100 Sobic002G217100 Sobic007G143400--Sobic002G217100 Sobic007G143400--Sobic001G462800 Sobic007G143400--Sobic003G268900 Sobic007G143400--Sobic002G367900 Sobic007G143400--Sobic006G210300 Sobic007G143400--Sobic004G065900 Sobic001G131200--Sobic002G418900 Sobic001G131200--Sobic004G006500 Sobic001G131200--Sobic009G028500 Sobic001G131200--Sobic002G195800 Sobic001G131200--Sobic001G161200 Sobic001G131200--Sobic010G089700 Sobic001G131200--Sobic002G185200 Sobic001G131200--Sobic001G118900 Sobic001G131200--Sobic002G207300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.