Gene annotation
Transcriptome id Sobic.001G131200.1
Synonym Sb01g011500
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
PB1 domain containing protein, expressed
UniProt A0A1Z5S5T2
Pfam PF00564
Panther DB PTHR31066 PTHR31066:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G26510 : Octicosapeptide/Phox/Bem1p family protein
RAP-DB (Rice) LOC_Os03g48520.1 : PB1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007665
Brachypodium KQK13723
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G418900 expressed protein -
2 Sobic.004G006500 expressed protein -
3 Sobic.009G028500 zinc finger family protein, putative, expressed -
4 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
5 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
6 Sobic.010G089700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
7 Sobic.002G185200 VQ domain containing protein, putative, expressed -
8 Sobic.001G118900 DUF292 domain containing protein, expressed -
9 Sobic.002G207300 tetraspanin family protein, putative, expressed -
10 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
11 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.008G187800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GCRP4 - Glycine and cysteine rich family protein precursor, expressed -
13 Sobic.001G216300 glutaredoxin domain containing protein, putative, expressed -
14 Sobic.007G124100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
15 Sobic.003G291600 receptor-like protein kinase 5 precursor, putative, expressed -
16 Sobic.001G095750 - -
17 Sobic.004G281300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
18 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.006G114200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@heavy metal associated domain containing protein, expressed -
20 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -


Gene co-expression network
sample Sobic001G131200 Sobic001G131200 Sobic002G418900 Sobic002G418900 Sobic001G131200--Sobic002G418900 Sobic004G006500 Sobic004G006500 Sobic001G131200--Sobic004G006500 Sobic009G028500 Sobic009G028500 Sobic001G131200--Sobic009G028500 Sobic002G195800 Sobic002G195800 Sobic001G131200--Sobic002G195800 Sobic001G161200 Sobic001G161200 Sobic001G131200--Sobic001G161200 Sobic010G089700 Sobic010G089700 Sobic001G131200--Sobic010G089700 Sobic002G185200 Sobic002G185200 Sobic001G131200--Sobic002G185200 Sobic001G118900 Sobic001G118900 Sobic001G131200--Sobic001G118900 Sobic002G207300 Sobic002G207300 Sobic001G131200--Sobic002G207300 Sobic002G418900--Sobic004G006500 Sobic002G418900--Sobic002G185200 Sobic002G418900--Sobic001G118900 Sobic004G065900 Sobic004G065900 Sobic002G418900--Sobic004G065900 Sobic002G418900--Sobic009G028500 Sobic002G367900 Sobic002G367900 Sobic002G418900--Sobic002G367900 Sobic002G418900--Sobic002G207300 Sobic007G143400 Sobic007G143400 Sobic002G418900--Sobic007G143400 Sobic002G418900--Sobic001G131200 Sobic004G006500--Sobic002G185200 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic009G010400 Sobic009G010400 Sobic004G006500--Sobic009G010400 Sobic004G006500--Sobic009G028500 Sobic004G006500--Sobic004G065900 Sobic004G006500--Sobic002G195800 Sobic006G114200 Sobic006G114200 Sobic004G006500--Sobic006G114200 Sobic004G086800 Sobic004G086800 Sobic004G006500--Sobic004G086800 Sobic009G028500--Sobic004G065900 Sobic009G028500--Sobic004G006500 Sobic009G028500--Sobic010G089700 Sobic009G028500--Sobic002G418900 Sobic009G028500--Sobic002G207300 Sobic009G028500--Sobic002G367900 Sobic009G028500--Sobic001G118900 Sobic009G028500--Sobic009G010400 Sobic009G028500--Sobic002G185200 Sobic002G195800--Sobic004G006500 Sobic003G376200 Sobic003G376200 Sobic002G195800--Sobic003G376200 Sobic002G195800--Sobic006G114200 Sobic002G195800--Sobic002G185200 Sobic001G450500 Sobic001G450500 Sobic002G195800--Sobic001G450500 Sobic002G195800--Sobic002G418900 Sobic007G139900 Sobic007G139900 Sobic002G195800--Sobic007G139900 Sobic009G227800 Sobic009G227800 Sobic002G195800--Sobic009G227800 Sobic004G114500 Sobic004G114500 Sobic002G195800--Sobic004G114500 Sobic001G161200--Sobic001G118900 Sobic006G205200 Sobic006G205200 Sobic001G161200--Sobic006G205200 Sobic001G161200--Sobic002G207300 Sobic001G161200--Sobic004G065900 Sobic003G131500 Sobic003G131500 Sobic001G161200--Sobic003G131500 Sobic001G095750 Sobic001G095750 Sobic001G161200--Sobic001G095750 Sobic001G216300 Sobic001G216300 Sobic001G161200--Sobic001G216300 Sobic001G161200--Sobic002G367900 Sobic001G041500 Sobic001G041500 Sobic001G161200--Sobic001G041500 Sobic010G089700--Sobic009G028500 Sobic004G281300 Sobic004G281300 Sobic010G089700--Sobic004G281300 Sobic010G089700--Sobic004G006500 Sobic004G092000 Sobic004G092000 Sobic010G089700--Sobic004G092000 Sobic009G032400 Sobic009G032400 Sobic010G089700--Sobic009G032400 Sobic002G137800 Sobic002G137800 Sobic010G089700--Sobic002G137800 Sobic010G089700--Sobic002G418900 Sobic010G089700--Sobic001G095750 Sobic007G124100 Sobic007G124100 Sobic010G089700--Sobic007G124100 Sobic002G185200--Sobic004G006500 Sobic002G185200--Sobic002G418900 Sobic002G294600 Sobic002G294600 Sobic002G185200--Sobic002G294600 Sobic002G185200--Sobic004G065900 Sobic002G185200--Sobic001G118900 Sobic006G146500 Sobic006G146500 Sobic002G185200--Sobic006G146500 Sobic002G185200--Sobic007G143400 Sobic002G185200--Sobic006G114200 Sobic002G185200--Sobic004G086800 Sobic001G118900--Sobic004G065900 Sobic001G118900--Sobic001G161200 Sobic001G118900--Sobic002G367900 Sobic001G118900--Sobic002G207300 Sobic001G118900--Sobic004G006500 Sobic001G118900--Sobic002G294600 Sobic001G118900--Sobic002G418900 Sobic001G118900--Sobic001G095750 Sobic001G462800 Sobic001G462800 Sobic001G118900--Sobic001G462800 Sobic002G207300--Sobic004G065900 Sobic002G207300--Sobic002G367900 Sobic007G201100 Sobic007G201100 Sobic002G207300--Sobic007G201100 Sobic002G207300--Sobic006G146500 Sobic002G207300--Sobic001G118900 Sobic003G425200 Sobic003G425200 Sobic002G207300--Sobic003G425200 Sobic002G207300--Sobic002G294600 Sobic001G410100 Sobic001G410100 Sobic002G207300--Sobic001G410100 Sobic001G095700 Sobic001G095700 Sobic002G207300--Sobic001G095700
Octagon: transcription factors


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