Gene annotation
Transcriptome id Sobic.007G139900.1
Synonym Sb07g021540
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5YLB3
Pfam PF05910
Panther DB PTHR31972 PTHR31972:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11000 : Plant protein of unknown function (DUF868)
RAP-DB (Rice) LOC_Os08g34120.1 : expressed protein
MaizeGDB (Corn) Zm00025a013909 , Zm00025a046984 , Zm00025a031179 , Zm00025a005860
Brachypodium KQJ90244
Barley HORVU5Hr1G065520.1 , HORVU5Hr1G065520.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
2 Sobic.005G208900 expressed protein K11968: ariadne-1
3 Sobic.007G224300 RING finger protein, putative, expressed -
4 Sobic.007G124100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
5 Sobic.004G006500 expressed protein -
6 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
7 Sobic.001G118900 DUF292 domain containing protein, expressed -
8 Sobic.004G065900 CML (Calmodulin like protein) with WRKY-binding domain(PubMedID : 31721651)@transcription factor(PubMedID : 30367619)@WRKY71, expressed -
9 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.007G196400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
11 Sobic.002G195800 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.002G207300 tetraspanin family protein, putative, expressed -
13 Sobic.003G376200 expressed protein -
14 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
15 Sobic.001G030600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
16 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
17 Sobic.002G185200 VQ domain containing protein, putative, expressed -
18 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
19 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
20 Sobic.002G418900 expressed protein -


Gene co-expression network
sample Sobic007G139900 Sobic007G139900 Sobic009G010400 Sobic009G010400 Sobic007G139900--Sobic009G010400 Sobic005G208900 Sobic005G208900 Sobic007G139900--Sobic005G208900 Sobic007G224300 Sobic007G224300 Sobic007G139900--Sobic007G224300 Sobic007G124100 Sobic007G124100 Sobic007G139900--Sobic007G124100 Sobic004G006500 Sobic004G006500 Sobic007G139900--Sobic004G006500 Sobic001G287600 Sobic001G287600 Sobic007G139900--Sobic001G287600 Sobic001G118900 Sobic001G118900 Sobic007G139900--Sobic001G118900 Sobic004G065900 Sobic004G065900 Sobic007G139900--Sobic004G065900 Sobic004G086800 Sobic004G086800 Sobic007G139900--Sobic004G086800 Sobic009G010400--Sobic004G086800 Sobic009G010400--Sobic004G065900 Sobic001G064900 Sobic001G064900 Sobic009G010400--Sobic001G064900 Sobic009G100500 Sobic009G100500 Sobic009G010400--Sobic009G100500 Sobic006G257700 Sobic006G257700 Sobic009G010400--Sobic006G257700 Sobic006G259000 Sobic006G259000 Sobic009G010400--Sobic006G259000 Sobic001G095700 Sobic001G095700 Sobic009G010400--Sobic001G095700 Sobic010G102000 Sobic010G102000 Sobic009G010400--Sobic010G102000 Sobic009G010400--Sobic004G006500 Sobic005G208900--Sobic007G139900 Sobic009G014200 Sobic009G014200 Sobic005G208900--Sobic009G014200 Sobic005G208900--Sobic007G224300 Sobic003G131500 Sobic003G131500 Sobic005G208900--Sobic003G131500 Sobic003G304100 Sobic003G304100 Sobic005G208900--Sobic003G304100 Sobic002G160600 Sobic002G160600 Sobic005G208900--Sobic002G160600 Sobic005G208900--Sobic001G287600 Sobic001G462800 Sobic001G462800 Sobic005G208900--Sobic001G462800 Sobic005G208900--Sobic007G124100 Sobic006G094500 Sobic006G094500 Sobic007G224300--Sobic006G094500 Sobic007G224300--Sobic007G139900 Sobic008G051400 Sobic008G051400 Sobic007G224300--Sobic008G051400 Sobic002G138700 Sobic002G138700 Sobic007G224300--Sobic002G138700 Sobic009G187600 Sobic009G187600 Sobic007G224300--Sobic009G187600 Sobic009G171100 Sobic009G171100 Sobic007G224300--Sobic009G171100 Sobic004G018200 Sobic004G018200 Sobic007G224300--Sobic004G018200 Sobic010G178800 Sobic010G178800 Sobic007G224300--Sobic010G178800 Sobic001G525400 Sobic001G525400 Sobic007G224300--Sobic001G525400 Sobic002G207300 Sobic002G207300 Sobic007G124100--Sobic002G207300 Sobic007G124100--Sobic007G139900 Sobic007G124100--Sobic001G118900 Sobic002G367900 Sobic002G367900 Sobic007G124100--Sobic002G367900 Sobic001G161200 Sobic001G161200 Sobic007G124100--Sobic001G161200 Sobic007G124100--Sobic004G065900 Sobic009G028500 Sobic009G028500 Sobic007G124100--Sobic009G028500 Sobic004G176900 Sobic004G176900 Sobic007G124100--Sobic004G176900 Sobic007G124100--Sobic003G131500 Sobic002G185200 Sobic002G185200 Sobic004G006500--Sobic002G185200 Sobic002G418900 Sobic002G418900 Sobic004G006500--Sobic002G418900 Sobic004G006500--Sobic001G118900 Sobic004G006500--Sobic009G010400 Sobic004G006500--Sobic009G028500 Sobic004G006500--Sobic004G065900 Sobic002G195800 Sobic002G195800 Sobic004G006500--Sobic002G195800 Sobic006G114200 Sobic006G114200 Sobic004G006500--Sobic006G114200 Sobic004G006500--Sobic004G086800 Sobic001G410100 Sobic001G410100 Sobic001G287600--Sobic001G410100 Sobic001G287600--Sobic004G065900 Sobic001G287600--Sobic004G086800 Sobic001G287600--Sobic002G207300 Sobic001G370600 Sobic001G370600 Sobic001G287600--Sobic001G370600 Sobic007G011000 Sobic007G011000 Sobic001G287600--Sobic007G011000 Sobic007G201100 Sobic007G201100 Sobic001G287600--Sobic007G201100 Sobic001G287600--Sobic009G010400 Sobic001G287600--Sobic010G102000 Sobic001G118900--Sobic004G065900 Sobic001G118900--Sobic001G161200 Sobic001G118900--Sobic002G367900 Sobic001G118900--Sobic002G207300 Sobic001G118900--Sobic004G006500 Sobic002G294600 Sobic002G294600 Sobic001G118900--Sobic002G294600 Sobic001G118900--Sobic002G418900 Sobic001G095750 Sobic001G095750 Sobic001G118900--Sobic001G095750 Sobic001G118900--Sobic001G462800 Sobic004G065900--Sobic002G207300 Sobic004G065900--Sobic001G095700 Sobic004G065900--Sobic002G367900 Sobic004G065900--Sobic001G118900 Sobic004G065900--Sobic002G294600 Sobic006G146500 Sobic006G146500 Sobic004G065900--Sobic006G146500 Sobic004G065900--Sobic007G201100 Sobic007G145700 Sobic007G145700 Sobic004G065900--Sobic007G145700 Sobic004G065900--Sobic009G010400 Sobic004G086800--Sobic009G010400 Sobic003G416500 Sobic003G416500 Sobic004G086800--Sobic003G416500 Sobic004G086800--Sobic006G259000 Sobic004G086800--Sobic004G065900 Sobic002G323900 Sobic002G323900 Sobic004G086800--Sobic002G323900 Sobic001G489500 Sobic001G489500 Sobic004G086800--Sobic001G489500 Sobic004G086800--Sobic010G102000 Sobic004G086800--Sobic002G138700 Sobic004G086800--Sobic001G287600
Octagon: transcription factors


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