Gene annotation
Transcriptome id Sobic.005G208900.1
Synonym ATARI7, ARI7, Sb05g026240
Functional annotation expressed protein
UniProt C5Y7I0
Pfam PF01485
Panther DB PTHR11685 PTHR11685:SF131
NCBI CDD KOG1815; Predicted E3 ubiquitin ligase
KEGG Orthology K11968; ariadne-1
Gene Ontology GO:0016567; protein ubiquitination GO:0004842ubiquitin-protein transferase activity


Orthologs (automatic annotation)
TAIR AT2G31510 : IBR domain-containing protein
RAP-DB (Rice) LOC_Os09g38630.1 : expressed protein
MaizeGDB (Corn) Zm00025a029172 , Zm00025a015947
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.005G208900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G014200 clathrin assembly protein, putative, expressed -
3 Sobic.007G224300 RING finger protein, putative, expressed -
4 Sobic.003G131500 VQ domain containing protein, putative, expressed -
5 Sobic.003G304100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peptide transporter PTR2, putative, expressed -
6 Sobic.002G160600 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
7 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
8 Sobic.001G462800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphatase 2C, putative, expressed -
9 Sobic.007G124100 Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor, putative, expressed K09286: EREBP-like factor
10 Sobic.007G143400 tetraspanin family protein, putative, expressed -
11 Sobic.001G084000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY3, expressed -
12 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
13 Sobic.007G196400 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12818: DHX8, ATP-dependent RNA helicase DHX8/PRP22
14 Sobic.001G118900 DUF292 domain containing protein, expressed -
15 Sobic.003G186500 N-rich protein, putative, expressed -
16 Sobic.002G367900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic proteinase nepenthesin precursor, putative, expressed -
17 Sobic.001G044800 uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
18 Sobic.001G032300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase, putative, expressed -
19 Sobic.001G095750 - -
20 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic005G208900 Sobic005G208900 Sobic007G139900 Sobic007G139900 Sobic005G208900--Sobic007G139900 Sobic009G014200 Sobic009G014200 Sobic005G208900--Sobic009G014200 Sobic007G224300 Sobic007G224300 Sobic005G208900--Sobic007G224300 Sobic003G131500 Sobic003G131500 Sobic005G208900--Sobic003G131500 Sobic003G304100 Sobic003G304100 Sobic005G208900--Sobic003G304100 Sobic002G160600 Sobic002G160600 Sobic005G208900--Sobic002G160600 Sobic001G287600 Sobic001G287600 Sobic005G208900--Sobic001G287600 Sobic001G462800 Sobic001G462800 Sobic005G208900--Sobic001G462800 Sobic007G124100 Sobic007G124100 Sobic005G208900--Sobic007G124100 Sobic009G010400 Sobic009G010400 Sobic007G139900--Sobic009G010400 Sobic007G139900--Sobic005G208900 Sobic007G139900--Sobic007G224300 Sobic007G139900--Sobic007G124100 Sobic004G006500 Sobic004G006500 Sobic007G139900--Sobic004G006500 Sobic007G139900--Sobic001G287600 Sobic001G118900 Sobic001G118900 Sobic007G139900--Sobic001G118900 Sobic004G065900 Sobic004G065900 Sobic007G139900--Sobic004G065900 Sobic004G086800 Sobic004G086800 Sobic007G139900--Sobic004G086800 Sobic009G014200--Sobic001G462800 Sobic002G344700 Sobic002G344700 Sobic009G014200--Sobic002G344700 Sobic001G081600 Sobic001G081600 Sobic009G014200--Sobic001G081600 Sobic002G197600 Sobic002G197600 Sobic009G014200--Sobic002G197600 Sobic001G482700 Sobic001G482700 Sobic009G014200--Sobic001G482700 Sobic004G084100 Sobic004G084100 Sobic009G014200--Sobic004G084100 Sobic003G158600 Sobic003G158600 Sobic009G014200--Sobic003G158600 Sobic002G367900 Sobic002G367900 Sobic009G014200--Sobic002G367900 Sobic007G051800 Sobic007G051800 Sobic009G014200--Sobic007G051800 Sobic006G094500 Sobic006G094500 Sobic007G224300--Sobic006G094500 Sobic007G224300--Sobic007G139900 Sobic008G051400 Sobic008G051400 Sobic007G224300--Sobic008G051400 Sobic002G138700 Sobic002G138700 Sobic007G224300--Sobic002G138700 Sobic009G187600 Sobic009G187600 Sobic007G224300--Sobic009G187600 Sobic009G171100 Sobic009G171100 Sobic007G224300--Sobic009G171100 Sobic004G018200 Sobic004G018200 Sobic007G224300--Sobic004G018200 Sobic010G178800 Sobic010G178800 Sobic007G224300--Sobic010G178800 Sobic001G525400 Sobic001G525400 Sobic007G224300--Sobic001G525400 Sobic003G131500--Sobic001G462800 Sobic010G272101 Sobic010G272101 Sobic003G131500--Sobic010G272101 Sobic001G095750 Sobic001G095750 Sobic003G131500--Sobic001G095750 Sobic010G016500 Sobic010G016500 Sobic003G131500--Sobic010G016500 Sobic003G131500--Sobic001G081600 Sobic002G182800 Sobic002G182800 Sobic003G131500--Sobic002G182800 Sobic006G203000 Sobic006G203000 Sobic003G131500--Sobic006G203000 Sobic009G128300 Sobic009G128300 Sobic003G131500--Sobic009G128300 Sobic004G244300 Sobic004G244300 Sobic003G131500--Sobic004G244300 Sobic006G223800 Sobic006G223800 Sobic003G304100--Sobic006G223800 Sobic001G510400 Sobic001G510400 Sobic003G304100--Sobic001G510400 Sobic003G304100--Sobic005G208900 Sobic007G196400 Sobic007G196400 Sobic003G304100--Sobic007G196400 Sobic003G304100--Sobic007G139900 Sobic001G030600 Sobic001G030600 Sobic003G304100--Sobic001G030600 Sobic001G502700 Sobic001G502700 Sobic003G304100--Sobic001G502700 Sobic003G304100--Sobic007G224300 Sobic005G110421 Sobic005G110421 Sobic003G304100--Sobic005G110421 Sobic007G064800 Sobic007G064800 Sobic002G160600--Sobic007G064800 Sobic006G014700 Sobic006G014700 Sobic002G160600--Sobic006G014700 Sobic005G218500 Sobic005G218500 Sobic002G160600--Sobic005G218500 Sobic002G216500 Sobic002G216500 Sobic002G160600--Sobic002G216500 Sobic001G314800 Sobic001G314800 Sobic002G160600--Sobic001G314800 Sobic008G075400 Sobic008G075400 Sobic002G160600--Sobic008G075400 Sobic004G140000 Sobic004G140000 Sobic002G160600--Sobic004G140000 Sobic006G265000 Sobic006G265000 Sobic002G160600--Sobic006G265000 Sobic007G183100 Sobic007G183100 Sobic002G160600--Sobic007G183100 Sobic001G410100 Sobic001G410100 Sobic001G287600--Sobic001G410100 Sobic001G287600--Sobic004G065900 Sobic001G287600--Sobic004G086800 Sobic002G207300 Sobic002G207300 Sobic001G287600--Sobic002G207300 Sobic001G370600 Sobic001G370600 Sobic001G287600--Sobic001G370600 Sobic007G011000 Sobic007G011000 Sobic001G287600--Sobic007G011000 Sobic007G201100 Sobic007G201100 Sobic001G287600--Sobic007G201100 Sobic001G287600--Sobic009G010400 Sobic010G102000 Sobic010G102000 Sobic001G287600--Sobic010G102000 Sobic001G462800--Sobic001G081600 Sobic002G217100 Sobic002G217100 Sobic001G462800--Sobic002G217100 Sobic002G294600 Sobic002G294600 Sobic001G462800--Sobic002G294600 Sobic001G462800--Sobic002G197600 Sobic001G462800--Sobic002G344700 Sobic001G462800--Sobic002G367900 Sobic006G210300 Sobic006G210300 Sobic001G462800--Sobic006G210300 Sobic007G145700 Sobic007G145700 Sobic001G462800--Sobic007G145700 Sobic004G281200 Sobic004G281200 Sobic001G462800--Sobic004G281200 Sobic007G124100--Sobic002G207300 Sobic007G124100--Sobic007G139900 Sobic007G124100--Sobic001G118900 Sobic007G124100--Sobic002G367900 Sobic001G161200 Sobic001G161200 Sobic007G124100--Sobic001G161200 Sobic007G124100--Sobic004G065900 Sobic009G028500 Sobic009G028500 Sobic007G124100--Sobic009G028500 Sobic004G176900 Sobic004G176900 Sobic007G124100--Sobic004G176900 Sobic007G124100--Sobic003G131500
Octagon: transcription factors


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