Gene annotation
Transcriptome id Sobic.001G084000.1
Synonym ATWRKY57, Sb01g007570, WRKY57
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
WRKY3, expressed
UniProt C5X072
Pfam PF03106
Panther DB PTHR31221 PTHR31221:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT1G69310 : WRKY DNA-binding protein 57
RAP-DB (Rice) LOC_Os03g55080.1 : WRKY3, expressed
MaizeGDB (Corn) Zm00025a044883 , Zm00025a008225
Brachypodium KQK13107 , PNT74111
Barley HORVU0Hr1G003340.9 , HORVU0Hr1G003340.4 , HORVU0Hr1G003340.5 , HORVU0Hr1G003340.6 , HORVU0Hr1G003340.7 , HORVU0Hr1G003340.1 , HORVU0Hr1G003340.2 , HORVU0Hr1G003340.3 , HORVU0Hr1G003340.12 , HORVU0Hr1G003340.13 , HORVU0Hr1G003340.10 , HORVU0Hr1G003340.11
Wheat TraesCS5B02G399900 , TraesCS2B02G280300 , TraesCS2A02G261900 , TraesCS2D02G262100 , TraesCS5A02G395100 , TraesCS5A02G395100 , TraesCS5D02G404400 , TraesCS5D02G404400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G138700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C2 domain containing protein, putative, expressed -
2 Sobic.001G314800 hydrolase, alpha/beta fold family protein, putative, expressed -
3 Sobic.006G098600 expressed protein -
4 Sobic.005G175300 expressed protein -
5 Sobic.001G287600 transcription factor MYC7E, putative, expressed K13422: transcription factor MYC2
6 Sobic.007G090300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.004G331800 alginate regulatory protein AlgP, putative, expressed -
8 Sobic.007G139900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.004G086800 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
10 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
11 Sobic.004G187800 RING-H2 finger protein ATL1O, putative, expressed -
12 Sobic.002G294600 aspartic proteinase nepenthesin precursor, putative, expressed -
13 Sobic.007G201100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@oxysterol-binding protein, putative, expressed -
14 Sobic.003G262100 expressed protein -
15 Sobic.001G285000 - -
16 Sobic.002G207300 tetraspanin family protein, putative, expressed -
17 Sobic.009G028200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
18 Sobic.009G010400 zinc finger, RING-type, putative, expressed -
19 Sobic.010G052600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
20 Sobic.006G014700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase


Gene co-expression network
sample Sobic001G084000 Sobic001G084000 Sobic002G138700 Sobic002G138700 Sobic001G084000--Sobic002G138700 Sobic001G314800 Sobic001G314800 Sobic001G084000--Sobic001G314800 Sobic006G098600 Sobic006G098600 Sobic001G084000--Sobic006G098600 Sobic005G175300 Sobic005G175300 Sobic001G084000--Sobic005G175300 Sobic001G287600 Sobic001G287600 Sobic001G084000--Sobic001G287600 Sobic007G090300 Sobic007G090300 Sobic001G084000--Sobic007G090300 Sobic004G331800 Sobic004G331800 Sobic001G084000--Sobic004G331800 Sobic007G139900 Sobic007G139900 Sobic001G084000--Sobic007G139900 Sobic004G086800 Sobic004G086800 Sobic001G084000--Sobic004G086800 Sobic006G259000 Sobic006G259000 Sobic002G138700--Sobic006G259000 Sobic002G138700--Sobic001G084000 Sobic002G138700--Sobic007G090300 Sobic002G138700--Sobic004G086800 Sobic010G102000 Sobic010G102000 Sobic002G138700--Sobic010G102000 Sobic001G195100 Sobic001G195100 Sobic002G138700--Sobic001G195100 Sobic003G416500 Sobic003G416500 Sobic002G138700--Sobic003G416500 Sobic009G010400 Sobic009G010400 Sobic002G138700--Sobic009G010400 Sobic002G138700--Sobic001G287600 Sobic001G314800--Sobic001G195100 Sobic006G014700 Sobic006G014700 Sobic001G314800--Sobic006G014700 Sobic006G265000 Sobic006G265000 Sobic001G314800--Sobic006G265000 Sobic001G088300 Sobic001G088300 Sobic001G314800--Sobic001G088300 Sobic002G407200 Sobic002G407200 Sobic001G314800--Sobic002G407200 Sobic008G018600 Sobic008G018600 Sobic001G314800--Sobic008G018600 Sobic003G296300 Sobic003G296300 Sobic001G314800--Sobic003G296300 Sobic003G310500 Sobic003G310500 Sobic001G314800--Sobic003G310500 Sobic008G181300 Sobic008G181300 Sobic001G314800--Sobic008G181300 Sobic001G410100 Sobic001G410100 Sobic006G098600--Sobic001G410100 Sobic004G065900 Sobic004G065900 Sobic006G098600--Sobic004G065900 Sobic006G098600--Sobic010G102000 Sobic006G098600--Sobic007G090300 Sobic006G098600--Sobic004G086800 Sobic001G314700 Sobic001G314700 Sobic006G098600--Sobic001G314700 Sobic003G341100 Sobic003G341100 Sobic006G098600--Sobic003G341100 Sobic006G098600--Sobic001G084000 Sobic002G207300 Sobic002G207300 Sobic006G098600--Sobic002G207300 Sobic001G128100 Sobic001G128100 Sobic005G175300--Sobic001G128100 Sobic010G185600 Sobic010G185600 Sobic005G175300--Sobic010G185600 Sobic005G175300--Sobic001G084000 Sobic010G118100 Sobic010G118100 Sobic005G175300--Sobic010G118100 Sobic005G072200 Sobic005G072200 Sobic005G175300--Sobic005G072200 Sobic003G253800 Sobic003G253800 Sobic005G175300--Sobic003G253800 Sobic010G094800 Sobic010G094800 Sobic005G175300--Sobic010G094800 Sobic004G092000 Sobic004G092000 Sobic005G175300--Sobic004G092000 Sobic003G339900 Sobic003G339900 Sobic005G175300--Sobic003G339900 Sobic001G287600--Sobic001G410100 Sobic001G287600--Sobic004G065900 Sobic001G287600--Sobic004G086800 Sobic001G287600--Sobic002G207300 Sobic001G370600 Sobic001G370600 Sobic001G287600--Sobic001G370600 Sobic007G011000 Sobic007G011000 Sobic001G287600--Sobic007G011000 Sobic007G201100 Sobic007G201100 Sobic001G287600--Sobic007G201100 Sobic001G287600--Sobic009G010400 Sobic001G287600--Sobic010G102000 Sobic009G100500 Sobic009G100500 Sobic007G090300--Sobic009G100500 Sobic007G090300--Sobic006G259000 Sobic002G199500 Sobic002G199500 Sobic007G090300--Sobic002G199500 Sobic001G059400 Sobic001G059400 Sobic007G090300--Sobic001G059400 Sobic007G090300--Sobic010G102000 Sobic003G352400 Sobic003G352400 Sobic007G090300--Sobic003G352400 Sobic002G232800 Sobic002G232800 Sobic007G090300--Sobic002G232800 Sobic007G090300--Sobic002G138700 Sobic007G090300--Sobic003G341100 Sobic003G369500 Sobic003G369500 Sobic004G331800--Sobic003G369500 Sobic002G417500 Sobic002G417500 Sobic004G331800--Sobic002G417500 Sobic004G331800--Sobic004G086800 Sobic001G285000 Sobic001G285000 Sobic004G331800--Sobic001G285000 Sobic004G331800--Sobic002G138700 Sobic004G331800--Sobic001G410100 Sobic004G331800--Sobic002G207300 Sobic009G149200 Sobic009G149200 Sobic004G331800--Sobic009G149200 Sobic003G425200 Sobic003G425200 Sobic004G331800--Sobic003G425200 Sobic007G139900--Sobic009G010400 Sobic005G208900 Sobic005G208900 Sobic007G139900--Sobic005G208900 Sobic007G224300 Sobic007G224300 Sobic007G139900--Sobic007G224300 Sobic007G124100 Sobic007G124100 Sobic007G139900--Sobic007G124100 Sobic004G006500 Sobic004G006500 Sobic007G139900--Sobic004G006500 Sobic007G139900--Sobic001G287600 Sobic001G118900 Sobic001G118900 Sobic007G139900--Sobic001G118900 Sobic007G139900--Sobic004G065900 Sobic007G139900--Sobic004G086800 Sobic004G086800--Sobic009G010400 Sobic004G086800--Sobic003G416500 Sobic004G086800--Sobic006G259000 Sobic004G086800--Sobic004G065900 Sobic002G323900 Sobic002G323900 Sobic004G086800--Sobic002G323900 Sobic001G489500 Sobic001G489500 Sobic004G086800--Sobic001G489500 Sobic004G086800--Sobic010G102000 Sobic004G086800--Sobic002G138700 Sobic004G086800--Sobic001G287600
Octagon: transcription factors


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