Gene annotation
Transcriptome id Sobic.009G028200.2,Sobic.009G028200.1,Sobic.009G028200.4,Sobic.009G028200.3
Synonym Sb09g002350
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt C5YZ54 , A0A1B6P6H9
Pfam PF03171 PF14226 PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF92 PTHR10209:SF92 PTHR10209
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G11180 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os05g03640.1 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a040720 , Zm00025a001977 , Zm00025a039721 , Zm00025a026996
Brachypodium KQK07885 , KQK10430 , KQK10429 , PNT73133
Barley HORVU4Hr1G000050.4 , HORVU4Hr1G000050.3 , HORVU4Hr1G000050.8 , HORVU4Hr1G000050.12 , HORVU3Hr1G087570.1 , HORVU5Hr1G094280.1 , HORVU3Hr1G087570.2 , HORVU1Hr1G015050.7 , HORVU1Hr1G015050.5 , HORVU3Hr1G087570.3 , HORVU3Hr1G087570.4 , HORVU3Hr1G087560.2 , HORVU3Hr1G087560.1
Wheat TraesCS4B02G344900 , TraesCS1D02G072700 , TraesCS3D02G345600 , TraesCS3A02G351400 , TraesCS3A02G351400 , TraesCS4B02G003300 , TraesCS4A02G311000 , TraesCS4D02G339900 , TraesCS5A02G513700 , TraesCS4D02G002800 , TraesCS1A02G070200 , TraesCS4B02G344800 , TraesCS1B02G088600 , TraesCS3B02G383900
Populus -


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cDNA sequences
Sobic.009G028200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G234000 expressed protein -
2 Sobic.009G149800 subtilisin N-terminal Region family protein, expressed -
3 Sobic.001G084000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY3, expressed -
4 Sobic.004G095600 NBS-LRR type disease resistance protein, putative, expressed -
5 Sobic.009G046600 stress-related protein, putative, expressed -
6 Sobic.002G373001 - -
7 Sobic.002G036150 - -
8 Sobic.010G217900 diphthamide biosynthesis protein 3, putative, expressed K15455: DPH3, diphthamide biosynthesis protein 3
9 Sobic.010G041700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
10 Sobic.003G237900 potassium channel AKT1, putative, expressed -
11 Sobic.005G028700 peflin, putative, expressed K13448: calcium-binding protein CML
12 Sobic.010G052600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
13 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
14 Sobic.007G151100 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
15 Sobic.002G040600 zinc finger, C3HC4 type domain containing protein, expressed K19043: E3 ubiquitin-protein ligase RHF
16 Sobic.003G124100 phenazine biosynthesis protein, putative, expressed -
17 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.010G194900 bZIP transcription factor domain containing protein, expressed -
19 Sobic.005G228900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
20 Sobic.009G247300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@WRKY11, expressed -


Gene co-expression network
sample Sobic009G028200 Sobic009G028200 Sobic009G234000 Sobic009G234000 Sobic009G028200--Sobic009G234000 Sobic009G149800 Sobic009G149800 Sobic009G028200--Sobic009G149800 Sobic001G084000 Sobic001G084000 Sobic009G028200--Sobic001G084000 Sobic004G095600 Sobic004G095600 Sobic009G028200--Sobic004G095600 Sobic009G046600 Sobic009G046600 Sobic009G028200--Sobic009G046600 Sobic002G373001 Sobic002G373001 Sobic009G028200--Sobic002G373001 Sobic002G036150 Sobic002G036150 Sobic009G028200--Sobic002G036150 Sobic010G217900 Sobic010G217900 Sobic009G028200--Sobic010G217900 Sobic010G041700 Sobic010G041700 Sobic009G028200--Sobic010G041700 Sobic010G175900 Sobic010G175900 Sobic009G234000--Sobic010G175900 Sobic004G306300 Sobic004G306300 Sobic009G234000--Sobic004G306300 Sobic005G028700 Sobic005G028700 Sobic009G234000--Sobic005G028700 Sobic004G259600 Sobic004G259600 Sobic009G234000--Sobic004G259600 Sobic006G100700 Sobic006G100700 Sobic009G234000--Sobic006G100700 Sobic002G202100 Sobic002G202100 Sobic009G234000--Sobic002G202100 Sobic003G063200 Sobic003G063200 Sobic009G234000--Sobic003G063200 Sobic004G247200 Sobic004G247200 Sobic009G234000--Sobic004G247200 Sobic005G168100 Sobic005G168100 Sobic009G234000--Sobic005G168100 Sobic003G024500 Sobic003G024500 Sobic009G149800--Sobic003G024500 Sobic001G148700 Sobic001G148700 Sobic009G149800--Sobic001G148700 Sobic002G378401 Sobic002G378401 Sobic009G149800--Sobic002G378401 Sobic003G403400 Sobic003G403400 Sobic009G149800--Sobic003G403400 Sobic009G149800--Sobic010G217900 Sobic009G149800--Sobic003G063200 Sobic004G015400 Sobic004G015400 Sobic009G149800--Sobic004G015400 Sobic008G111500 Sobic008G111500 Sobic009G149800--Sobic008G111500 Sobic004G063500 Sobic004G063500 Sobic009G149800--Sobic004G063500 Sobic002G138700 Sobic002G138700 Sobic001G084000--Sobic002G138700 Sobic001G314800 Sobic001G314800 Sobic001G084000--Sobic001G314800 Sobic006G098600 Sobic006G098600 Sobic001G084000--Sobic006G098600 Sobic005G175300 Sobic005G175300 Sobic001G084000--Sobic005G175300 Sobic001G287600 Sobic001G287600 Sobic001G084000--Sobic001G287600 Sobic007G090300 Sobic007G090300 Sobic001G084000--Sobic007G090300 Sobic004G331800 Sobic004G331800 Sobic001G084000--Sobic004G331800 Sobic007G139900 Sobic007G139900 Sobic001G084000--Sobic007G139900 Sobic004G086800 Sobic004G086800 Sobic001G084000--Sobic004G086800 Sobic004G095600--Sobic002G373001 Sobic001G226800 Sobic001G226800 Sobic004G095600--Sobic001G226800 Sobic006G131600 Sobic006G131600 Sobic004G095600--Sobic006G131600 Sobic002G034500 Sobic002G034500 Sobic004G095600--Sobic002G034500 Sobic003G102200 Sobic003G102200 Sobic004G095600--Sobic003G102200 Sobic002G092801 Sobic002G092801 Sobic004G095600--Sobic002G092801 Sobic004G302200 Sobic004G302200 Sobic004G095600--Sobic004G302200 Sobic007G165701 Sobic007G165701 Sobic004G095600--Sobic007G165701 Sobic003G262100 Sobic003G262100 Sobic004G095600--Sobic003G262100 Sobic004G157000 Sobic004G157000 Sobic009G046600--Sobic004G157000 Sobic009G046600--Sobic005G028700 Sobic009G129000 Sobic009G129000 Sobic009G046600--Sobic009G129000 Sobic001G399100 Sobic001G399100 Sobic009G046600--Sobic001G399100 Sobic009G046600--Sobic010G041700 Sobic009G023200 Sobic009G023200 Sobic009G046600--Sobic009G023200 Sobic002G245800 Sobic002G245800 Sobic009G046600--Sobic002G245800 Sobic010G178200 Sobic010G178200 Sobic009G046600--Sobic010G178200 Sobic007G151100 Sobic007G151100 Sobic009G046600--Sobic007G151100 Sobic001G449700 Sobic001G449700 Sobic002G373001--Sobic001G449700 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G333400 Sobic002G333400 Sobic002G373001--Sobic002G333400 Sobic002G373001--Sobic004G095600 Sobic002G036100 Sobic002G036100 Sobic002G036150--Sobic002G036100 Sobic009G066800 Sobic009G066800 Sobic002G036150--Sobic009G066800 Sobic009G247300 Sobic009G247300 Sobic002G036150--Sobic009G247300 Sobic005G010200 Sobic005G010200 Sobic002G036150--Sobic005G010200 Sobic002G359300 Sobic002G359300 Sobic002G036150--Sobic002G359300 Sobic003G158500 Sobic003G158500 Sobic002G036150--Sobic003G158500 Sobic009G036100 Sobic009G036100 Sobic002G036150--Sobic009G036100 Sobic001G040200 Sobic001G040200 Sobic002G036150--Sobic001G040200 Sobic008G177800 Sobic008G177800 Sobic002G036150--Sobic008G177800 Sobic001G067601 Sobic001G067601 Sobic010G217900--Sobic001G067601 Sobic001G019900 Sobic001G019900 Sobic010G217900--Sobic001G019900 Sobic005G228000 Sobic005G228000 Sobic010G217900--Sobic005G228000 Sobic001G533300 Sobic001G533300 Sobic010G217900--Sobic001G533300 Sobic010G217900--Sobic004G247200 Sobic001G037000 Sobic001G037000 Sobic010G217900--Sobic001G037000 Sobic003G162700 Sobic003G162700 Sobic010G217900--Sobic003G162700 Sobic004G177700 Sobic004G177700 Sobic010G217900--Sobic004G177700 Sobic010G217900--Sobic005G028700 Sobic010G041700--Sobic009G046600 Sobic010G041700--Sobic005G010200 Sobic006G089300 Sobic006G089300 Sobic010G041700--Sobic006G089300 Sobic010G041700--Sobic007G151100 Sobic002G374100 Sobic002G374100 Sobic010G041700--Sobic002G374100 Sobic010G041700--Sobic009G066800 Sobic010G041700--Sobic009G129000 Sobic001G483400 Sobic001G483400 Sobic010G041700--Sobic001G483400 Sobic002G272900 Sobic002G272900 Sobic010G041700--Sobic002G272900
Octagon: transcription factors


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