Gene annotation
Transcriptome id Sobic.003G124100.2,Sobic.003G124100.1
Synonym Sb03g010510
Functional annotation phenazine biosynthesis protein, putative, expressed
UniProt A0A1B6Q2T0 , A0A1B6Q2S2
Pfam PF02567
Panther DB PTHR13774 PTHR13774:SF17
NCBI CDD KOG3033; Predicted PhzC/PhzF-type epimerase
KEGG Orthology -
Gene Ontology GO:0009058; biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G02860 : Phenazine biosynthesis PhzC/PhzF protein
RAP-DB (Rice) LOC_Os01g16146.1 : phenazine biosynthesis protein, putative, expressed
MaizeGDB (Corn) Zm00025a035263
Brachypodium KQK03800 , PNT70319 , PNT70318 , KQK03796 , KQK03797 , KQK03798 , KQK03799 , PNT70317 , KQK03794 , KQK03795 , KQK03791 , KQK03792 , KQK03793
Barley HORVU3Hr1G037330.1 , HORVU3Hr1G037330.3 , HORVU3Hr1G037330.5 , HORVU3Hr1G037330.4 , HORVU3Hr1G037330.7 , HORVU3Hr1G037330.6 , HORVU3Hr1G037330.9 , HORVU3Hr1G037330.8 , HORVU3Hr1G037330.11 , HORVU3Hr1G037330.12 , HORVU3Hr1G037540.4 , HORVU3Hr1G037540.2 , HORVU3Hr1G037540.3 , HORVU3Hr1G037540.1
Wheat TraesCS3B02G212800 , TraesCS3D02G187000 , TraesCS3D02G187000 , TraesCS3D02G187000 , TraesCS3B02G212500 , TraesCS3D02G187200 , TraesCS3D02G187200 , TraesCS3A02G182800 , TraesCS3A02G182500 , TraesCS3A02G182800
Populus -


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cDNA sequences
Sobic.003G124100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G195500 reductase, putative, expressed -
2 Sobic.003G417350 - -
3 Sobic.002G070200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL84 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.004G302200 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR11 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
5 Sobic.004G186500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
6 Sobic.003G357100 phosphatidic acid phosphatase-related, putative, expressed -
7 Sobic.010G268400 eukaryotic aspartyl protease domain containing protein, expressed -
8 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
9 Sobic.003G416300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
10 Sobic.001G206400 fiber protein Fb34, putative, expressed -
11 Sobic.001G192600 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17794: mitochondrial import inner membrane translocase subunit TIM23
12 Sobic.004G010300 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
13 Sobic.001G432000 LYR motif containing protein, putative, expressed -
14 Sobic.003G268200 VIP1 protein, putative, expressed -
15 Sobic.002G319500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AAA family ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
16 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
17 Sobic.001G432700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G536500 expressed protein -
19 Sobic.003G050200 embryo-specific 3, putative, expressed -
20 Sobic.009G074100 prenylated rab acceptor, putative, expressed -


Gene co-expression network
sample Sobic003G124100 Sobic003G124100 Sobic010G195500 Sobic010G195500 Sobic003G124100--Sobic010G195500 Sobic003G417350 Sobic003G417350 Sobic003G124100--Sobic003G417350 Sobic002G070200 Sobic002G070200 Sobic003G124100--Sobic002G070200 Sobic004G302200 Sobic004G302200 Sobic003G124100--Sobic004G302200 Sobic004G186500 Sobic004G186500 Sobic003G124100--Sobic004G186500 Sobic003G357100 Sobic003G357100 Sobic003G124100--Sobic003G357100 Sobic010G268400 Sobic010G268400 Sobic003G124100--Sobic010G268400 Sobic007G127100 Sobic007G127100 Sobic003G124100--Sobic007G127100 Sobic003G416300 Sobic003G416300 Sobic003G124100--Sobic003G416300 Sobic005G093000 Sobic005G093000 Sobic010G195500--Sobic005G093000 Sobic002G312900 Sobic002G312900 Sobic010G195500--Sobic002G312900 Sobic002G329000 Sobic002G329000 Sobic010G195500--Sobic002G329000 Sobic010G195500--Sobic010G268400 Sobic010G008400 Sobic010G008400 Sobic010G195500--Sobic010G008400 Sobic001G147900 Sobic001G147900 Sobic010G195500--Sobic001G147900 Sobic004G062500 Sobic004G062500 Sobic010G195500--Sobic004G062500 Sobic010G239500 Sobic010G239500 Sobic010G195500--Sobic010G239500 Sobic004G101300 Sobic004G101300 Sobic010G195500--Sobic004G101300 Sobic003G192100 Sobic003G192100 Sobic003G417350--Sobic003G192100 Sobic002G326100 Sobic002G326100 Sobic003G417350--Sobic002G326100 Sobic001G015100 Sobic001G015100 Sobic003G417350--Sobic001G015100 Sobic003G417350--Sobic002G329000 Sobic007G155000 Sobic007G155000 Sobic003G417350--Sobic007G155000 Sobic001G038900 Sobic001G038900 Sobic003G417350--Sobic001G038900 Sobic001G192600 Sobic001G192600 Sobic003G417350--Sobic001G192600 Sobic003G417350--Sobic010G268400 Sobic001G367600 Sobic001G367600 Sobic003G417350--Sobic001G367600 Sobic002G070200--Sobic004G186500 Sobic003G162700 Sobic003G162700 Sobic002G070200--Sobic003G162700 Sobic002G373001 Sobic002G373001 Sobic002G070200--Sobic002G373001 Sobic002G333400 Sobic002G333400 Sobic002G070200--Sobic002G333400 Sobic001G407800 Sobic001G407800 Sobic002G070200--Sobic001G407800 Sobic008G044300 Sobic008G044300 Sobic002G070200--Sobic008G044300 Sobic002G070200--Sobic001G192600 Sobic001G449700 Sobic001G449700 Sobic002G070200--Sobic001G449700 Sobic005G186100 Sobic005G186100 Sobic002G070200--Sobic005G186100 Sobic010G136000 Sobic010G136000 Sobic004G302200--Sobic010G136000 Sobic003G320800 Sobic003G320800 Sobic004G302200--Sobic003G320800 Sobic004G302200--Sobic010G268400 Sobic001G432700 Sobic001G432700 Sobic004G302200--Sobic001G432700 Sobic003G135700 Sobic003G135700 Sobic004G302200--Sobic003G135700 Sobic002G407100 Sobic002G407100 Sobic004G302200--Sobic002G407100 Sobic002G319500 Sobic002G319500 Sobic004G302200--Sobic002G319500 Sobic004G302200--Sobic002G373001 Sobic009G065300 Sobic009G065300 Sobic004G302200--Sobic009G065300 Sobic004G186500--Sobic002G070200 Sobic001G399100 Sobic001G399100 Sobic004G186500--Sobic001G399100 Sobic001G536500 Sobic001G536500 Sobic004G186500--Sobic001G536500 Sobic010G204600 Sobic010G204600 Sobic004G186500--Sobic010G204600 Sobic009G046600 Sobic009G046600 Sobic004G186500--Sobic009G046600 Sobic005G109000 Sobic005G109000 Sobic004G186500--Sobic005G109000 Sobic003G063200 Sobic003G063200 Sobic004G186500--Sobic003G063200 Sobic005G228900 Sobic005G228900 Sobic004G186500--Sobic005G228900 Sobic005G028700 Sobic005G028700 Sobic004G186500--Sobic005G028700 Sobic001G389000 Sobic001G389000 Sobic003G357100--Sobic001G389000 Sobic005G103300 Sobic005G103300 Sobic003G357100--Sobic005G103300 Sobic001G516600 Sobic001G516600 Sobic003G357100--Sobic001G516600 Sobic009G159400 Sobic009G159400 Sobic003G357100--Sobic009G159400 Sobic001G115300 Sobic001G115300 Sobic003G357100--Sobic001G115300 Sobic002G082600 Sobic002G082600 Sobic003G357100--Sobic002G082600 Sobic002G104900 Sobic002G104900 Sobic003G357100--Sobic002G104900 Sobic009G179900 Sobic009G179900 Sobic003G357100--Sobic009G179900 Sobic001G119000 Sobic001G119000 Sobic003G357100--Sobic001G119000 Sobic010G268400--Sobic002G329000 Sobic010G268400--Sobic001G516600 Sobic010G268400--Sobic003G192100 Sobic010G268400--Sobic005G093000 Sobic001G107400 Sobic001G107400 Sobic010G268400--Sobic001G107400 Sobic003G037800 Sobic003G037800 Sobic010G268400--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic010G268400--Sobic002G245100 Sobic003G429000 Sobic003G429000 Sobic010G268400--Sobic003G429000 Sobic010G268400--Sobic010G195500 Sobic007G127100--Sobic003G416300 Sobic002G327300 Sobic002G327300 Sobic007G127100--Sobic002G327300 Sobic007G127100--Sobic010G008400 Sobic008G128900 Sobic008G128900 Sobic007G127100--Sobic008G128900 Sobic007G127100--Sobic009G065300 Sobic007G127100--Sobic001G432700 Sobic007G127100--Sobic002G407100 Sobic004G064400 Sobic004G064400 Sobic007G127100--Sobic004G064400 Sobic009G121900 Sobic009G121900 Sobic007G127100--Sobic009G121900 Sobic005G168800 Sobic005G168800 Sobic003G416300--Sobic005G168800 Sobic003G416300--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic003G416300--Sobic004G046200 Sobic003G050200 Sobic003G050200 Sobic003G416300--Sobic003G050200 Sobic003G416300--Sobic002G312900 Sobic003G416300--Sobic007G127100 Sobic003G079400 Sobic003G079400 Sobic003G416300--Sobic003G079400 Sobic008G106700 Sobic008G106700 Sobic003G416300--Sobic008G106700 Sobic001G082600 Sobic001G082600 Sobic003G416300--Sobic001G082600
Octagon: transcription factors


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